Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq318 107 2e-18 seq2451 95.1 1e-14 >seq318 Length=266665 Score = 107 bits (118), Expect = 2e-18 Identities = 180/258 (70%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || || ||||| | || || |||| ||||| ||||| || || Sbjct 55895 TGTAGACCCTCGTCTCGCGAGATCAATTCGTTCGAGAAGGTCAGTCCCGGCATTAGCCCG 55954 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| || || || || ||||| || || ||||| || ||||| || || Sbjct 55955 CGCTTCTTCAGCCAGAATATCGCGCAGAAACTCCCGGAGAAGAAAATCCCCTCGACGCAA 56014 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGG-TCGAGACTTGTCGAACCACTTGAGAGCCCA 119686 ||||| |||| || ||||| || || ||| || | ||| ||||||||||||||| Sbjct 56015 GCGAACGCGATCAGCCGCTCGGCGAAGCTCTCGGCACC-GCCGATCCACTTGAGAGCCCA 56073 Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTC 119746 | ||||| || | |||||| || | | |||||| | ||| |||| ||||| || Sbjct 56074 ATCCGCCTTCTTCTTCACGCAGGGCACCATGTCGATGGCATGGAAGAGTTTGTTCTTCTC 56133 Query 119747 AGCACCATCCTTAATATA 119764 | | ||||| ||||| Sbjct 56134 ATCGGAGTCCTTGATATA 56151 >seq2451 Length=68748 Score = 95.1 bits (104), Expect = 1e-14 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || || ||||| | ||||| |||| ||||| ||||| || || Sbjct 68148 TGTAGACCCTCGTCTCGCGAGATCAATTCATTCGAGAAGGTGAGTCCCGGCATTAGCCCG 68089 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| || || || | ||||| || || ||||| || |||| || || Sbjct 68088 CGCTTCTTCAGCCAGAATATCGCGTAGAAACTCCCGGAGAAGAAAATCCCCTTGACGCAA 68029 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGG-TCGAGACTTGTCGAACCACTTGAGAGCCCA 119686 |||| || | || ||||| || || ||| || ||||| ||||||||||||||| Sbjct 68028 ACGAACGCTATCAGCCGCTCGGCGAAGCTCTCGGCACC-GTCGATCCACTTGAGAGCCCA 67970 Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTC 119746 | ||||| || | |||||| || || | |||||| | | | |||| ||||| || Sbjct 67969 ATCCGCCTTCTTCTTCACGCAGGGCACCGTGTCGATGGCATGGGAGAGTTTGTTCTTCTC 67910 Query 119747 AGCA 119750 | || Sbjct 67909 ATCA 67906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588771559068200