Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq752 360 2e-94 seq1263 309 3e-79 seq587 89.7 6e-13 >seq752 Length=193215 Score = 360 bits (398), Expect = 2e-94 Identities = 486/669 (73%), Gaps = 6/669 (1%) Strand=Plus/Minus Query 163698 TGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTCGTTACGTCGTGGTACAC 163757 ||| ||| | || | || |||||| |||| |||||||| || || || || ||||| || Sbjct 189601 TGCCTATTTCGCTTTAGGGGGCTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATAC 189542 Query 163758 CCATGGACTGGCAACTTCCTATCTTGAGGG-TGCTAATTTTCTCACAGCGGCTGTGTCAA 163816 |||||| |||| | ||||||| | || || ||| ||||| | || || || || || | Sbjct 189541 TCATGGATTGGCTAGTTCCTATTTGGAAGGATGC-AATTTCTTAACCGCCGCAGTTTCGA 189483 Query 163817 CGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAGGGC 163875 | ||||| | | | | ||||| || || || || || |||||||| || || || Sbjct 189482 CTCCTGCCAATAGTTTAGCACATTCG-TTGTTGTTACTATGAGGTCCTGAAGCCCAAGGA 189424 Query 163876 GATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGAGCC 163935 ||||| || ||| |||| | || || || |||| ||||| || |||||||| | Sbjct 189423 GATTTGACTCGTTGGTGCCAATTGGGCGGTCTGTGGACGTTTGTTGCTCTCCACGGCACT 189364 Query 163936 TTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCGC-CTGATTGGAATCAG 163994 || | || || ||||| ||| | || ||| ||||||||||||| ||| || | | | Sbjct 189363 TTCGGACTAATAGGTTTTATGTTACGTCAAATTGAACTTGCTCGGTCTG-TTCAATTGCG 189305 Query 163995 ACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCAT 164054 ||| || ||||| || || ||||||| ||| |||||||| || ||| ||| || || || Sbjct 189304 ACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGAT 189245 Query 164055 CTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTT 164114 || || || ||||| || |||||||||| || || |||||| || || || || || Sbjct 189244 TTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCGGCTATATT 189185 Query 164115 CAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGAACCCCTTCCATATGAT 164174 ||||| || | || | ||||| |||||||| ||||| |||||||| || |||||||| Sbjct 189184 TCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGAT 189125 Query 164175 GGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGA 164234 ||||||||| ||| || | |||| || |||||| ||||| || || | || || || Sbjct 189124 GGGAGTTGCCGGTGTATTGGGCGCGGCTCTGCTATGCGCTATCCATGGTGCTACTGTAGA 189065 Query 164235 AAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACA 164294 |||||| || | ||||||||| || ||||| || || |||||| | | || || Sbjct 189064 AAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCGTTTAACCCAACCCA 189005 Query 164295 GGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGT 164354 | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| || || Sbjct 189004 AGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGT 188945 Query 164355 TGCGTTTTC 164363 ||| ||||| Sbjct 188944 TGCTTTTTC 188936 >seq1263 Length=120960 Score = 309 bits (342), Expect = 3e-79 Identities = 421/580 (73%), Gaps = 6/580 (1%) Strand=Plus/Plus Query 163698 TGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTCGTTACGTCGTGGTACAC 163757 ||| ||| | || | || |||||| |||| |||||||| || || || || ||||| || Sbjct 54806 TGCCTATTTCGCTTTAGGGGGCTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATAC 54865 Query 163758 CCATGGACTGGCAACTTCCTATCTTGAGGG-TGCTAATTTTCTCACAGCGGCTGTGTCAA 163816 |||||| |||| | ||||||| | || || ||| ||||| | || || || || || | Sbjct 54866 TCATGGATTGGCTAGTTCCTATTTGGAAGGATGC-AATTTCTTAACCGCCGCAGTTTCGA 54924 Query 163817 CGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAGGGC 163875 | ||||| | | | | ||||| || || || || ||||||||||| || || || Sbjct 54925 CTCCTGCCAATAGTTTAGCACATTCG-TTGTTGTTACTATGGGGTCCTGAAGCCCAAGGA 54983 Query 163876 GATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGAGCC 163935 ||||| || ||| |||| | || || || |||| ||||| || |||||||| || Sbjct 54984 GATTTNACTCGTTGGTGCCAATTGGGCGGTCTGTGGACGTTTGTTGCTCTCCACGGCGCT 55043 Query 163936 TTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTC-GCCTGATTGGAATCAG 163994 || | || || ||||| ||| | || |||||||||||||||| | ||| || | | | Sbjct 55044 TTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGGTCTG-TTCAATTGCG 55102 Query 163995 ACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCAT 164054 ||| || ||||| || || ||||||| ||| |||||||| || ||| ||| || || || Sbjct 55103 ACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGAT 55162 Query 164055 CTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTT 164114 || || || ||||| || |||||||||| || || |||||| || || || || || Sbjct 55163 TTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCGGCTATATT 55222 Query 164115 CAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGAACCCCTTCCATATGAT 164174 ||||| || | || | ||||| |||||||| ||||| |||||||| || |||||||| Sbjct 55223 TCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGAT 55282 Query 164175 GGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGA 164234 ||||||||| ||| || | |||| || |||||| ||||| || || | | || || Sbjct 55283 GGGAGTTGCCGGTGTATTGGGCGCGGCTCTGCTATGCGCTATCCATGGTGCTATTGTAGA 55342 Query 164235 AAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTT 164274 |||||| || | ||||||||| || ||||| || ||| Sbjct 55343 AAATACTTTATTTGAAGATGGTGATGCTGCAAATACATTT 55382 >seq587 Length=401750 Score = 89.7 bits (98), Expect = 6e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 163210 ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGT 163269 || ||||| |||||||| || |||||||| |||||||| || | ||||| |||| ||| Sbjct 44409 ACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 44468 Query 163270 CGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATG 163329 ||||| | || || | || || || | || | || | ||||||||||||||| Sbjct 44469 CGTGTAATTAATACTTAAGCTGATATTATTAATCATGGTAACCTTGGTATGGAAGTTATG 44528 Query 163330 CACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGCAGCT 163371 || || | ||| |||| ||||| || | ||||| || ||| Sbjct 44529 CATGAACATAATACTCATAACTTTCCCATGGACCTAGCTGCT 44570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557390455623800