Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq1519 93.3 1e-14 seq5090 84.2 7e-12 >seq1519 Length=169030 Score = 93.3 bits (102), Expect = 1e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 36452 AAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 36511 || |||||| |||||||| | || || || | ||||||||||||||| |||||||| || Sbjct 82629 AATCATAAAGTTGAAAGTACTAGAGATTCCTAAAGGCATACCATCAGAAAAACTCCCATG 82688 Query 36512 TCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTAC 36571 |||| || |||| | ||| || || || |||||||||| |||||||| || || Sbjct 82689 ACCAATTGGATAGATCATGAAAACGGCGGTAGCAGCTGCAACAGAAGCTGAATATGCAAC 82748 Query 36572 ACATATCCACGGCCTCATACC 36592 | ||||| | | |||||| Sbjct 82749 AGCAATCCAGCGGCACATACC 82769 >seq5090 Length=30266 Score = 84.2 bits (92), Expect = 7e-12 Identities = 96/130 (74%), Gaps = 7/130 (5%) Strand=Plus/Minus Query 36484 GAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATG 36543 |||||||||||||||| || || ||||| |||| || |||| ||||| || || Sbjct 13124 GAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATAGATCAAGAAAACGGC----- 13070 Query 36544 CTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAAC 36603 ||||||||||| |||||||| || ||| ||||| || |||||| | | ||| Sbjct 13069 --GCTGCAACAGGAGCTGAATATGCAACAGTGATCCAAGGGTGCATACCCAAACGGAAAC 13012 Query 36604 TAAGTTCCCA 36613 |||||||||| Sbjct 13011 TAAGTTCCCA 13002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150404786627226