Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_016657.1
Length=47055
Score E
Sequences producing significant alignments: (Bits) Value
seq1519 93.3 1e-14
seq5090 84.2 7e-12
>seq1519
Length=169030
Score = 93.3 bits (102), Expect = 1e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 36452 AAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 36511
|| |||||| |||||||| | || || || | ||||||||||||||| |||||||| ||
Sbjct 82629 AATCATAAAGTTGAAAGTACTAGAGATTCCTAAAGGCATACCATCAGAAAAACTCCCATG 82688
Query 36512 TCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTAC 36571
|||| || |||| | ||| || || || |||||||||| |||||||| || ||
Sbjct 82689 ACCAATTGGATAGATCATGAAAACGGCGGTAGCAGCTGCAACAGAAGCTGAATATGCAAC 82748
Query 36572 ACATATCCACGGCCTCATACC 36592
| ||||| | | ||||||
Sbjct 82749 AGCAATCCAGCGGCACATACC 82769
>seq5090
Length=30266
Score = 84.2 bits (92), Expect = 7e-12
Identities = 96/130 (74%), Gaps = 7/130 (5%)
Strand=Plus/Minus
Query 36484 GAGGCATACCATCAGAGAAACTCCCTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATG 36543
|||||||||||||||| || || ||||| |||| || |||| ||||| || ||
Sbjct 13124 GAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATAGATCAAGAAAACGGC----- 13070
Query 36544 CTGCTGCAACAGGGGCTGAATAAGCTACACATATCCACGGCCTCATACCTAGTCTATAAC 36603
||||||||||| |||||||| || ||| ||||| || |||||| | | |||
Sbjct 13069 --GCTGCAACAGGAGCTGAATATGCAACAGTGATCCAAGGGTGCATACCCAAACGGAAAC 13012
Query 36604 TAAGTTCCCA 36613
||||||||||
Sbjct 13011 TAAGTTCCCA 13002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150404786627226
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |