Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq587 91.5 2e-13
seq5090 86.0 7e-12
>seq587
Length=401750
Score = 91.5 bits (100), Expect = 2e-13
Identities = 122/166 (73%), Gaps = 8/166 (5%)
Strand=Plus/Minus
Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417
|||||| ||||| | || ||||| |||| ||| | || |||||||||||||| |||||
Sbjct 44570 AGCAGCTAGGTCCATGGGAAAGTTATGAGTATTATGTTCATGCATAACTTCCATACCAAG 44511
Query 67418 TCCTGCTCTG-TTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAA 67473
| | || |||| || || || ||||| ||| || || |||| ||||
Sbjct 44510 GT-TACCATGATTAATAATATCAGCTTAAGTATTAATTAC---ACGACCTTGACTATCAA 44455
Query 67474 CGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGT 67519
| || ||||||||||| |||||||| || |||||||| ||||||||
Sbjct 44454 CTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGT 44409
>seq5090
Length=30266
Score = 86.0 bits (94), Expect = 7e-12
Identities = 103/139 (74%), Gaps = 7/139 (5%)
Strand=Plus/Minus
Query 67873 GAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATG 67932
||||||| | ||||| || |||||||| | ||||||| |||||| || |||
Sbjct 13124 GAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATAGATCAAGAAAACGGCG---- 13069
Query 67933 CTGCAGACACTGGAGCAGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAG 67992
||||| || ||||| || ||||| ||| ||||||||| ||||||| | |||| ||
Sbjct 13068 CTGCA---ACAGGAGCTGAATATGCAACAGTGATCCAAGGGTGCATACCCAAACGGAAAC 13012
Query 67993 AAAGTTCCCACTGACGACC 68011
||||||||||| || |||
Sbjct 13011 TAAGTTCCCACTCACTACC 12993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566750405540040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |