Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq587 91.5 2e-13 seq5090 86.0 7e-12 >seq587 Length=401750 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/166 (73%), Gaps = 8/166 (5%) Strand=Plus/Minus Query 67358 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAG 67417 |||||| ||||| | || ||||| |||| ||| | || |||||||||||||| ||||| Sbjct 44570 AGCAGCTAGGTCCATGGGAAAGTTATGAGTATTATGTTCATGCATAACTTCCATACCAAG 44511 Query 67418 TCCTGCTCTG-TTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAA 67473 | | || |||| || || || ||||| ||| || || |||| |||| Sbjct 44510 GT-TACCATGATTAATAATATCAGCTTAAGTATTAATTAC---ACGACCTTGACTATCAA 44455 Query 67474 CGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGT 67519 | || ||||||||||| |||||||| || |||||||| |||||||| Sbjct 44454 CTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGT 44409 >seq5090 Length=30266 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/139 (74%), Gaps = 7/139 (5%) Strand=Plus/Minus Query 67873 GAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATG 67932 ||||||| | ||||| || |||||||| | ||||||| |||||| || ||| Sbjct 13124 GAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGATAGATCAAGAAAACGGCG---- 13069 Query 67933 CTGCAGACACTGGAGCAGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAG 67992 ||||| || ||||| || ||||| ||| ||||||||| ||||||| | |||| || Sbjct 13068 CTGCA---ACAGGAGCTGAATATGCAACAGTGATCCAAGGGTGCATACCCAAACGGAAAC 13012 Query 67993 AAAGTTCCCACTGACGACC 68011 ||||||||||| || ||| Sbjct 13011 TAAGTTCCCACTCACTACC 12993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566750405540040