Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq752 329 4e-85 seq1263 273 2e-68 seq98 91.5 2e-13 seq1519 84.2 3e-11 >seq752 Length=193215 Score = 329 bits (364), Expect = 4e-85 Identities = 485/680 (71%), Gaps = 10/680 (1%) Strand=Plus/Plus Query 66863 AAACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTC 66922 ||| |||| |||||||| || ||||| |||||||| || || |||||||| |||||||| Sbjct 188938 AAAAGCAACCCCAAAGATTTGGGACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTC 188997 Query 66923 TTCCTCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAG 66982 ||| |||| || | || || || ||| || ||||| |||||||||||| | | Sbjct 188998 TTCAGCTTGGGTTGGGTTAAACGCACGGAATGTATTTGCACCATCACCATCTTCAAATAA 189057 Query 66983 AGTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGC 67042 |||||| ||||| ||| ||||||| || || | |||| || | |||| | ||| || Sbjct 189058 AGTATTTTCTACAGTAGCACCATGGATAGCGCATAGCAGAGCCGCGCCCAATACACCGGC 189117 Query 67043 TACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAG 67102 || |||||||||||||| |||||||| ||||| ||||| || ||||| | || || | Sbjct 189118 AACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAAAGGAT 189177 Query 67103 GAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAG 67162 ||||||||| || || | || || ||| || || || ||||||| || ||||| || Sbjct 189178 GAATCGAAATATAGCCGCTACACCAAAACTGGGCGCAAAGAACCAACCAGACTGACCTAG 189237 Query 67163 AGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATT 67222 || || || || || ||| |||||||||||| || ||| ||||||| || || ||||| Sbjct 189238 TGGATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCGATTGCATT 189297 Query 67223 GTAGGGACGGATACCGATGAGA-CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTA 67281 || || || | | || ||| || || ||||||| || || | ||| ||||| |||| Sbjct 189298 ATAAGGTCGCA-ATTGAACAGACCGAGCAAGTTCAATTTGACGTAACATAAAACCTATTA 189356 Query 67282 GAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGA 67341 | |||||| |||||||| || ||||| |||| || || || | |||| ||| || Sbjct 189357 GTCCGAAAGTGCCGTGGAGAGCAACAAACGTCCACAGACCGCCCAATTGGCACCAACGAG 189416 Query 67342 CGAAATCCCCCTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAG 67401 ||||| || || | |||||||| || |||| | | ||||| | | | || | Sbjct 189417 TCAAATCTCCTTGGGCTTCAGGACCTCATAGTAACAACAACGAATGTGCTAAACTATTGG 189476 Query 67402 CAGGCGTTGACACAGCCGCTGTGAGAAAATTAGCA-CCCTCAAGAT---AACTAGACGCG 67457 |||| || || || || || || | ||||| ||| || || | || ||||| || Sbjct 189477 CAGGAGTCGAAACTGCGGCGGTTAAGAAATT-GCATCCTTCCAAATAGGAACTA---GCC 189532 Query 67458 AGTCCGTGAGTGTACCAGCTTGTGACAAACGTAGTACCAGTAAGCCAGCCACCAATTGCC 67517 | ||| ||||| ||||| || ||||| || ||||| |||| |||||| || | || Sbjct 189533 AATCCATGAGTATACCATGAAGTTACAAAGGTTGTACCTGTAAACCAGCCCCCTAAAGCG 189592 Query 67518 ATATAAGCAGTGGGAAAAAG 67537 | ||| ||| ||||| || Sbjct 189593 AAATAGGCACAAGGAAAGAG 189612 >seq1263 Length=120960 Score = 273 bits (302), Expect = 2e-68 Identities = 404/566 (71%), Gaps = 10/566 (2%) Strand=Plus/Minus Query 66966 TCACCATCTTCATACAGAGTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATGCA 67025 |||||||||||| | | |||||| ||||| || ||||||| || || | |||| || Sbjct 55366 TCACCATCTTCAAATAAAGTATTTTCTACAATAGCACCATGGATAGCGCATAGCAGAGCC 55307 Query 67026 CCACCCAGGATACCTGCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGAAT 67085 | |||| | ||| || || |||||||||||||| |||||||| ||||| ||||| || Sbjct 55306 GCGCCCAATACACCGGCAACTCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAAC 55247 Query 67086 CCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAAAC 67145 ||||| | || || | ||||||||| || || | || || ||| || || || ||| Sbjct 55246 CCTTGGAAAAAAAGGATGAATCGAAATATAGCCGCTACACCAAAACTGGGCGCAAAGAAC 55187 Query 67146 CAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGACCA 67205 |||| || ||||| || || || || || || ||| |||||||||||| || ||| || Sbjct 55186 CAACCAGACTGACCTAGTGGATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCA 55127 Query 67206 GAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCAGTTCAAACTGGCG 67264 ||||| || || ||||| || || || | | || ||| || || |||||||| || || Sbjct 55126 GAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGACCGAGCAAGTTCAAATTGACG 55068 Query 67265 AAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCTCC 67324 | ||| ||||| ||||| ||||||| |||||||| || ||||| |||| || || || Sbjct 55067 TAACATAAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAACGTCCACAGACCGCC 55008 Query 67325 AAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGACCCCAAAGTAGAAGAAGAGA 67384 | |||| ||| || ||||| || || | ||||||||||| |||| | | || Sbjct 55007 CAATTGGCACCAACGAGTNAAATCTCCTTGGGCTTCAGGACCCCATAGTAACAACAACGA 54948 Query 67385 ATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTGAGAAAATTAGCA-CCCTCAA 67443 ||| | | | || ||||| || || || || || || | ||||| ||| || || | Sbjct 54947 ATGTGCTAAACTATTGGCAGGAGTCGAAACTGCGGCGGTTAAGAAATT-GCATCCTTCCA 54889 Query 67444 GAT---AACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAAACGTAGTACCAGTAA 67500 || ||||| || | ||| ||||| ||||| || ||||| || ||||| |||| Sbjct 54888 AATAGGAACTA---GCCAATCCATGAGTATACCATGAAGTTACAAAGGTTGTACCTGTAA 54832 Query 67501 GCCAGCCACCAATTGCCATATAAGCA 67526 |||||| || | || | ||| ||| Sbjct 54831 ACCAGCCCCCTAAAGCGAAATAGGCA 54806 >seq98 Length=412963 Score = 91.5 bits (100), Expect = 2e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599 |||||||||||||||| ||||||||||||| || ||| ||| | || || ||||||| Sbjct 211431 AAGGACCACCATTGTATAACCACTCATCAACGGATGCCACTTTTTAGATTGGGTAAAAGT 211490 Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659 | | ||| || || || |||||| || || |||| || ||||| ||||| | Sbjct 211491 GCAAACCTATAGCTGCAAAAGTAGGAATAATGACATAGAAAATAATATTGTTGCCATAAA 211550 Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGA 68719 || || | || |||| |||| ||||||||| | ||| | | || ||| |||| Sbjct 211551 ATAGGGACCTAGAAACAAATTCATGAATACCATAAAAATCCCTTGAAGTAGTAGCAATGA 211610 Query 68720 AGGCGACGATGAA 68732 |||| | ||||| Sbjct 211611 AGGCAATAATGAA 211623 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/196 (71%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599 |||||||||||||||| ||||||||||||| || ||| ||| | || || ||||||| Sbjct 210539 AAGGACCACCATTGTATAACCACTCATCAATGGATGCCACTTTTTAGATTGGGTAAAAGT 210598 Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659 | | ||| || || || |||||| || || |||| || ||||| ||||| | Sbjct 210599 GTAAACCTATAGCTGCAAAAGTAGGAATAATGACATAGAAAATAATATTGTTGCCATAAA 210658 Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCAT--CGATGTC-CACAGGGGGAGCAGCGA 68716 || || | || |||| || ||||||||||| ||| | | ||||| |||| | Sbjct 210659 ATAGGGACCTAGAAACAAATTAACGAATACCATAAAAATGCCTTAAAGGGGTAGCA---A 210715 Query 68717 TGAAGGCGACGATGAA 68732 ||||||| | ||||| Sbjct 210716 TGAAGGCAATAATGAA 210731 >seq1519 Length=169030 Score = 84.2 bits (92), Expect = 3e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 68330 AGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGACCGAAAG 68389 |||||||||||| ||| || || | |||||| | ||||| || || ||||| | | Sbjct 82637 AGTTGAAAGTACTAGAGATTCCTAAAGGCATACCATCAGAAAAACTCCCATGACCAATTG 82696 Query 68390 GATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATCC 68449 |||||| || ||| || |||| || |||||||||| || || ||||||||| |||| Sbjct 82697 GATAGATCATGAAAACGGCGGTAGCAGCTGCAACAGAAGCTGAATATGCAACAGCAATCC 82756 Query 68450 AAGGACGCATACCAAGACG 68468 | | | |||||| | ||| Sbjct 82757 AGCGGCACATACCCAAACG 82775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571855832767080