Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1034 122 2e-22 seq6423 84.2 4e-11 >seq1034 Length=134858 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| | ||||| |||| || | || | || || ||| || ||||| Sbjct 72320 ATGCCACCTCTAAGACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCA 72261 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||| || ||| || | ||| || || ||||| || || ||||| ||||||||| Sbjct 72260 GCAAGCGTCCTGCCATCCTCAAGTTGCTTGCCAGCAAATATCAACCTCTGCTGATCAGGA 72201 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || |||| ||| | ||| ||| || || ||| ||| Sbjct 72200 GGGATACCTTCCTTGTCCTGAATCTTGGCTTTCACATTGTCAATTGTGTCTGAACTTTCA 72141 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||||||||| || || |||||||| ||||| || ||||| Sbjct 72140 ACCTCCAGTGTTATAGTTTTTCCAGTAAGCGTTTTCACAAAAATCTGCAT 72091 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | ||||| ||||| |||| || | ||| || ||||||||||| Sbjct 72092 ATGCCACCCCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCCTTCTGGATATTATAGTCC 72033 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || | || || || |||||||| | |||||| ||||||||| Sbjct 72032 GCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAAATAAGTCTCTGCTGATCAGGA 71973 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| || || || || || || | ||| | ||| |||||| || || ||| Sbjct 71972 GGAATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATAGTGTCTGAGCTTTCA 71913 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || ||||| || || |||||||| Sbjct 71912 ACCTCAAGGGTGATGGTCTTGCCAGTAAGTGTTTTCACGAAGATTTGCAT 71863 >seq6423 Length=19511 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || ||||| || || | | ||| || || ||||| || ||||| || || || || Sbjct 9904 TGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATCCCTTCCTTGTCCTGAATC 9963 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| || ||||||||||| |||||||| || || || || || || Sbjct 9964 TTGGCCTTCACATTGTCGATGGTATCGGAAGATTCAACTTCGAGGGTAATGGTCTTCCCG 10023 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || || || ||||| Sbjct 10024 GTTAGGGTTTTCACGAAGATCTGCAT 10049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899342118712080