Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq251 116 1e-20
seq135 109 2e-18
seq149 105 2e-17
seq33 98.7 3e-15
seq7 96.9 1e-14
seq728 95.1 4e-14
seq94 86.0 2e-11
>seq251
Length=297614
Score = 116 bits (128), Expect = 1e-20
Identities = 321/485 (66%), Gaps = 18/485 (4%)
Strand=Plus/Minus
Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933
|| || | ||| || || || || ||||| ||||| || | |||| ||| | |
Sbjct 249873 AAGGCAGAGTCCAAAATGTCTGCCCTGTTAGTTGCCGCAATGACAATGATACCAGTGTTA 249814
Query 288934 TGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993
|| ||| |||||||| ||| |||| || ||||| || || || ||||||||||||
Sbjct 249813 CCCTCAAAGCCATCCATTTCTGTCAAAAGCTGGTTAAGAGTCTGCTCTCTTTCATCATTT 249754
Query 288994 GAACCTCTTGAATCACCCGAATC-GCTCCtttttt--tACCAACAGCATCAATTTCGTCA 289050
|||| |||| | | | |||| | | | ||||| ||||||||||| ||
Sbjct 249753 ---CCTC------CACCAATACCAGTTCCTCTCTGCCTTCCAACGGCATCAATTTCATCC 249703
Query 289051 ATGAAAATCACACACGGAGAATTTTGTCTCGCAAT--TGCAAATAATTCTCTTACACGGG 289108
| || | | || |||| ||| | | || | || ||| | || | || || |
Sbjct 249702 ACAAATACAATGCAGGGAGCATTCTCCTTGGCCTTCTTGAAAAGA--TCACGGACTCGAG 249645
Query 289109 ATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTT 289167
| || |||| |||||| |||| || |||||||||||| | || | | || | || |
Sbjct 249644 AGGCACCAACTCCAACAAACATCTCAACAAATTCAGAACCTGAGA-TGGAGAAAAAAGGC 249586
Query 289168 ACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCC 289227
||| ||||| ||||| | ||| | || ||||| ||||| ||||| ||||| || ||
Sbjct 249585 ACACCAGCTTCACCTGCAATTGCTTTAGCTAGAAGAGTCTTTCCTGTGCCAGGGGGGCCA 249526
Query 289228 TCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTT 289287
| || || ||||| || | ||| ||| ||| | || ||||||| |||||
Sbjct 249525 ATAAGGAGGACACCCTTAGGGATGCGTGCACCAACAGCAGTGAATCTCTCAGGTTTCTTT 249466
Query 289288 AAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCA 289347
| ||||| |||| |||| || || | ||||| ||||| ||| || |||||| ||
Sbjct 249465 AGGAATTCAACAACTTCCATAAAATCTTGCTTTGCTTCATCGACTCCAGCAACATCATCA 249406
Query 289348 AAAGT 289352
|| ||
Sbjct 249405 AATGT 249401
>seq135
Length=369280
Score = 109 bits (120), Expect = 2e-18
Identities = 223/327 (68%), Gaps = 6/327 (2%)
Strand=Plus/Plus
Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079
|||| | |||||| || |||||||| ||||| ||||| | || ||||| || ||
Sbjct 149654 CCTTGCTCTACCAATTGCGTCAATTTCATCAATAAAAATTATACTAGGAGAGCACTGCCT 149713
Query 289080 CGCAATTGCA--AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACA 289137
|| || | || || | ||| || | |||| ||||| ||||||| |||| || | |
Sbjct 149714 TGC--TTCCTGGAACAAGTTTCTCACCCTTGATGGTCCAACACCAACAAACATCTCCATA 149771
Query 289138 AATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGC 289196
|| || ||| | |||| | || | ||| | |||| | || || ||| ||| | ||
Sbjct 149772 AAATCTGAACCCGATA-TAGACAAGAAAGGTACACCAGACTCCCCAGCTGTTGCTTTTGC 149830
Query 289197 CAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC 289256
|| || ||||| ||||||||||| || || | || | | | || || || | ||||||
Sbjct 149831 TAGGAGAGTCTTCCCTGTTCCAGGAGGACCAACCAACAAAGCACCTTTGGGAATTTTTGC 149890
Query 289257 CCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATA 289316
|| || ||||||| ||| |||| | ||| | || | |||| | || |
Sbjct 149891 ACCTAGTTCCTCGTATTTCTTTGGGTTCTTGAGAAAGTGCACGAATTCCATGATCTCTTG 149950
Query 289317 TTTTGCCTCATCACATCCTGCTACATC 289343
|||||||||||||||||| || |||||
Sbjct 149951 TTTTGCCTCATCACATCCAGCAACATC 149977
>seq149
Length=554269
Score = 105 bits (116), Expect = 2e-17
Identities = 283/424 (67%), Gaps = 24/424 (6%)
Strand=Plus/Plus
Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997
|||| |||||||| || || | || || |||||||| ||||| |||||||| |
Sbjct 82262 TAAAACCATCCATTTCCGTCAACAACTGGTTCAGTGTTTGCTCCCTCTCATCATTC---C 82318
Query 288998 CTCTTGAATCACCCGAATCGC---TCCtttttt--tACCAACAGCATCAATTTCGTCAAT 289052
||| |||| |||| | |||| | | | || ||||||||||| || |||||
Sbjct 82319 CTC------CACC--AATCCCAGTTCCTCTCTGCCTGCCTACAGCATCAATCTCATCAAT 82370
Query 289053 GAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGC 289112
||||| || || || ||||| |||| | || || || || || | || ||
Sbjct 82371 GAAAACCAAGCAGGGGGAATTGGCCTTCGCCTTGTTGAACAAGTCCCTCACTCTTGAAGC 82430
Query 289113 TCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATA-CTTGAATGAATGTTACAT 289171
|||| |||||| |||| |||| ||||| || | | | | ||| ||||| ||
Sbjct 82431 CCCAACGCCAACAAACATCTCTATGAATTCTGATCCTGCAAGCGAGAA-GAATGGAACTC 82489
Query 289172 TTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTA 289231
||||| ||||| | ||| | |||||||| || || || ||||||||||| || | |
Sbjct 82490 CGGCTTCTCCTGCAATGGCCTTTGCCAGAAGCGTTTTCCCGGTTCCAGGTGGCCCGACCA 82549
Query 289232 ATAGAACTCCCTTTGGTACTTTTGCCC---CAGCAGACTTATATTTCTCAGGGCTCTTTA 289288
| || || || || || | ||| || | |||||| | | ||||| || |||| |
Sbjct 82550 AGAGCACCCCTTTAGGGATTTTGGCACCGACAGCAG-CGAACTTTTCT--GGTGTCTTCA 82606
Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348
| || || || || || | | || | || || |||||| ||| ||||| ||| |||
Sbjct 82607 AGAACTCAACGATCTCTTGGAAATCTTGCTTGGCTTCATCAACTCCAGCTACGTCATCAA 82666
Query 289349 AAGT 289352
||||
Sbjct 82667 AAGT 82670
>seq33
Length=615807
Score = 98.7 bits (108), Expect = 3e-15
Identities = 220/325 (68%), Gaps = 4/325 (1%)
Strand=Plus/Plus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|| |||||||| || || |||||||| | | || |||| ||| | |||| | |
Sbjct 34719 CCCACAGCATCTATCTCATCAATGAACACTATGCAAGGAGCCTTTGATTTCGCCTTATCG 34778
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
|| || || || || | || || |||| || || ||| || ||||| || ||||||
Sbjct 34779 AACAAGTCCCTCACTCTTGAAGCACCAACTCCCACGAACAGCTCCACAAACTCGGAAGCG 34838
Query 289150 GATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
| || || | |||| || ||||| || || || || ||||||| ||| |||||
Sbjct 34839 GC-ACAAGAGAAAAATGGCACCCCAGCTTCTCCAGCCACAGCTCTCGCCAAAAGAGTCTT 34897
Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268
|| || ||||| || ||| | || | | ||| ||||| | ||| || || | | |
Sbjct 34898 GCCAGTACCAGGAGGACCCACCAACAAACATCCTTTTGGAATTTTAGCTCCTAATGCCGT 34957
Query 289269 ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCT-CAAGTTCATATTTTGCCTCAT 289327
|||||| || ||| |||| || || || || | ||| | ||| | || ||| |||| |
Sbjct 34958 ATATTTATCTGGGTTCTTCAAGAAGTCGACCACTTCTTGCAACTCCAG-TTTCGCCTGGT 35016
Query 289328 CACATCCTGCTACATCAGCAAAAGT 289352
| ||| || ||||||||||| ||
Sbjct 35017 CCGCTCCAGCAACATCAGCAAACGT 35041
>seq7
Length=809814
Score = 96.9 bits (106), Expect = 1e-14
Identities = 214/316 (68%), Gaps = 4/316 (1%)
Strand=Plus/Minus
Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089
|||| ||||||| ||| |||||||| | | || || | | | || || | |
Sbjct 238059 CCAATTGCATCAACTTCATCAATGAATACAATACTAGGTGCACACCGCCTTGCCTCTTGA 238000
Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149
||||| || || | |||| |||| ||||||| |||| || | ||| ||||| |
Sbjct 237999 AATAAGCTCCTGACCCTTGATGGACCAACACCAACAAACATCTCCATAAAATCAGATCCA 237940
Query 289150 GATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| | | || | ||| | |||| | ||| ||||| ||| |||| |||||||||||
Sbjct 237939 GACA-TAGAGAGGAAAGGCACATCAGATTCACCTGCAGTTGCTTTCGCGAGAAGTGTCTT 237881
Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCAGACT 289267
||||| ||||| || ||| | | || | || || || | ||| || |||| | ||
Sbjct 237880 CCCTGTGCCAGGAGGGCCCACAAGAAGCGCACCTTTAGGAATTTTGGCTCCCAACTC-CT 237822
Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327
||| |||| ||| |||| | || | |||| |||| | ||| | |||||||||||
Sbjct 237821 CATACTTCTTTGGGTTCTTAAGGAAGTGCACAAATTCCATTATTTCCTGTTTTGCCTCAT 237762
Query 289328 CACATCCTGCTACATC 289343
|||| || ||||| ||
Sbjct 237761 CACAGCCAGCTACGTC 237746
>seq728
Length=387020
Score = 95.1 bits (104), Expect = 4e-14
Identities = 163/237 (69%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483
||| ||||| || ||||| ||||| | ||| |||||| | ||| |||| | |
Sbjct 375134 ACAAACATGTACCCTGTATGCATCGCTTTGGTCGAATAGCCTCTCTTTGAGGAAGTGTGC 375193
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
||||| || | |||||||||||| ||||||||||| || || || || |||||||| ||
Sbjct 375194 AGCACCATGAGCAATCATACAATCTCGCTCCATTTCTCCAAAGCGGAGGCCACCATCACG 375253
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
|| | || || |||||||| | || ||| | || ||| || | || |||
Sbjct 375254 AGATCGCCCTTCTGCAGGCTGTCTTGTTAGAATTTGCACAGGGCCTCTCCCACGTGAATG 375313
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660
||| |||| ||||| || || || | ||||||| ||| || || | ||| ||
Sbjct 375314 GATCTTGTCATCGACCATGTGTTTCAGTCTCTGGTAGTATGTAGGCCCAAGGAATAT 375370
>seq94
Length=420873
Score = 86.0 bits (94), Expect = 2e-11
Identities = 103/135 (76%), Gaps = 5/135 (4%)
Strand=Plus/Plus
Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886
||| ||||| ||| |||| || || ||| || || |||| ||| |||| ||||||||
Sbjct 396014 ACGAGGAACCCCAAGGGTCACATTCT--TTGCACTCA-CACCGGCATAGTGAAAAGTATT 396070
Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAA-TCATACCAACCATTT 301945
|||||| | || |||| ||||||||||| ||||| |||| ||| |||| ||| |
Sbjct 396071 CAGAGTCATCTGTGTAGCAGGCTCACCAATGGACTGTGCAGCAACACAT-CCAATCATCT 396129
Query 301946 CTCCTGGTGCTACAA 301960
|||||||||| ||||
Sbjct 396130 CTCCTGGTGCAACAA 396144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471293941556153
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