Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq752 349 4e-91 seq1263 302 5e-77 seq2510 138 1e-27 seq37 102 9e-17 seq587 89.7 6e-13 >seq752 Length=193215 Score = 349 bits (386), Expect = 4e-91 Identities = 488/678 (72%), Gaps = 6/678 (1%) Strand=Plus/Minus Query 152425 CTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACG 152484 || ||||| ||| ||| | ||| | || || ||| |||| || || || || | || Sbjct 189612 CTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGCTGGTTTACAGGTACAACCTTTGTAACT 189553 Query 152485 AGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTG 152542 ||||||||||| || ||||| ||||||||| |||| || |||| ||||||| | | Sbjct 189552 TCATGGTATACTCATGGATTGGCTAGTTCCTATTTGGAAGGATGCAA--TTTCTTAACCG 189495 Query 152543 CGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTG 152602 | |||||||| ||||| || || | | | ||||| | || | || || ||||||| Sbjct 189494 CCGCAGTTTCGACTCCTGCCAATAGTTTAGCACATTCGTTGTTGTTACTATGAGGTCCTG 189435 Query 152603 AGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGC 152662 | || ||||| ||||| | ||| || | || || || ||| | ||||| || | Sbjct 189434 AAGCCCAAGGAGATTTGACTCGTTGGTGCCAATTGGGCGGTCTGTGGACGTTTGTTGCTC 189375 Query 152663 TCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTC 152721 ||||||| |||||| ||||| ||||| ||| | || || ||||||| || || ||| Sbjct 189374 TCCACGGCACTTTCGGACTAATAGGTTTTATGTTACGTCAAATTGAACTTGCTCGGTCTG 189315 Query 152722 ATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGC 152781 || | | || || || ||||| || || ||||||| ||| || |||||||||||| Sbjct 189314 TTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCT 189256 Query 152782 GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTC 152841 || || || || || || || ||||| || ||||||| || || || ||| || || Sbjct 189255 GTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTA 189196 Query 152842 GCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCG 152901 || || || || |||||| | || || | ||||| || || || ||||||||||| || Sbjct 189195 GCGGCTATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCA 189136 Query 152902 TTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGT 152961 |||||||||||||| ||||| ||| | ||||| | ||| |||| | || || |||||| Sbjct 189135 TTTCATATGATGGGAGTTGCCGGTGTATTGGGCGCGGCTCTGCTATGCGCTATCCATGGT 189076 Query 152962 GTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAGCTTTC 153021 | ||| ||||| |||||||| | | |||||||||| ||||| || ||| || || Sbjct 189075 GCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCGTTT 189016 Query 153022 GACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAG 153081 || || |||| ||||| || ||||| ||||| || |||||||| || |||||||| Sbjct 189015 AACCCAACCCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAA 188956 Query 153082 ATATTTGGAATTGCTTTT 153099 || ||||| |||||||| Sbjct 188955 ATCTTTGGGGTTGCTTTT 188938 >seq1263 Length=120960 Score = 302 bits (334), Expect = 5e-77 Identities = 409/564 (73%), Gaps = 6/564 (1%) Strand=Plus/Plus Query 152436 TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCGCGACGAGTTGGTATAC 152495 ||| ||| | ||| | || || ||| |||| || || || || | || |||||||| Sbjct 54806 TGCCTATTTCGCTTTAGGGGGCTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATAC 54865 Query 152496 TCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAGTTTCT 152553 ||| || ||||| ||||||||| |||| || |||| ||||||| | || |||||||| Sbjct 54866 TCATGGATTGGCTAGTTCCTATTTGGAAGGATGCAA--TTTCTTAACCGCCGCAGTTTCG 54923 Query 152554 ACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCTCAAGGG 152613 ||||| || || | | | ||||| | || | || ||||||||||| || ||||| Sbjct 54924 ACTCCTGCCAATAGTTTAGCACATTCGTTGTTGTTACTATGGGGTCCTGAAGCCCAAGGA 54983 Query 152614 GATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCT 152673 ||||| | ||| || | || || || ||| | ||||| || |||||||| ||| Sbjct 54984 GATTTNACTCGTTGGTGCCAATTGGGCGGTCTGTGGACGTTTGTTGCTCTCCACGGCGCT 55043 Query 152674 TTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCG 152732 |||| ||||| ||||| ||| | || || |||||||| || || ||| || | | || Sbjct 55044 TTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCG 55102 Query 152733 TCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCAT 152792 || || ||||| || || ||||||| ||| || |||||||||||| || || || || Sbjct 55103 ACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGAT 55162 Query 152793 CTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTT 152852 || || || ||||| || ||||||| || || || ||| || || || || || || Sbjct 55163 TTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCGGCTATATT 55222 Query 152853 CCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATTGAATCCGTTTCATATGAT 152912 |||||| | || || | ||||| || || || ||||||||||| || ||||||||||| Sbjct 55223 TCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGAT 55282 Query 152913 GGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGA 152972 ||| ||||| ||| | ||||| | ||| |||| | || || ||||||| || ||||| Sbjct 55283 GGGAGTTGCCGGTGTATTGGGCGCGGCTCTGCTATGCGCTATCCATGGTGCTATTGTAGA 55342 Query 152973 GAATACTTTGTATCAAGATGGTGA 152996 |||||||| | | |||||||||| Sbjct 55343 AAATACTTTATTTGAAGATGGTGA 55366 >seq2510 Length=74850 Score = 138 bits (152), Expect = 1e-27 Identities = 144/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 153178 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAA 153237 ||||| ||||| || || || || || || || | || || |||||| | || | ||| Sbjct 57000 GGTCTGGCTCTGAACCTACGCGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAA 56941 Query 153238 GATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCT 153297 ||||||||||||||||| ||||| || || ||||| ||||| ||||||||| |||||||| Sbjct 56940 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 56881 Query 153298 TGGTTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCA 153357 ||| |||| || || || |||||||| ||| | | |||||||| ||||| | || Sbjct 56880 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCC 56821 Query 153358 CGAGGCAAC 153366 || || ||| Sbjct 56820 CGTGGAAAC 56812 >seq37 Length=530226 Score = 102 bits (112), Expect = 9e-17 Identities = 159/226 (70%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 153028 ACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTT 153087 || |||| | ||| || ||||| ||||| || |||||||| || |||||||| || ||| Sbjct 49863 ACCCAAGTTGGAGAAACTTATTCAATGGTCACCGCTAACCGCTT-TGGTCCCAAATCTTT 49921 Query 153088 GGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATG 153147 || || |||| ||||||| | ||| | ||||| |||||| ||||||| || | Sbjct 49922 GGGGTTTTTTTTTCCAATAAATGTTGGTTACATTTTTTTATGTAATTTGTACTAGTAACC 49981 Query 153148 GGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGAT 153207 ||| | |||| || | || | | ||||| ||| | || || || | || | Sbjct 49982 GGTTTATGGATGAGAGCTCCTAGAGTAGTCGGTCTGGCTTTGAACCTACGCACCTATGGC 50041 Query 153208 TTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGA 153253 || || || ||||||||| | || | ||||||||||||||| ||| Sbjct 50042 TTCGTTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTAAGA 50087 >seq587 Length=401750 Score = 89.7 bits (98), Expect = 6e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 151659 TCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTC 151718 ||||||| ||||| |||||||| || |||||||| |||||||| || | | ||| ||| Sbjct 44404 TCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTC 44463 Query 151719 AGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAG 151778 | || || | || || | || || || | || | || || |||||||||| Sbjct 44464 AAGGTCGTGTAATTAATACTTAAGCTGATATTATTAATCATGGTAACCTTGGTATGGAAG 44523 Query 151779 TTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCT 151825 ||||||| || | |||| |||| ||||| || | ||||| |||||| Sbjct 44524 TTATGCATGAACATAATACTCATAACTTTCCCATGGACCTAGCTGCT 44570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549431619194680