Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_021559.1
Length=179063
Score E
Sequences producing significant alignments: (Bits) Value
seq1263 150 2e-31
seq752 147 3e-30
>seq1263
Length=120960
Score = 150 bits (166), Expect = 2e-31
Identities = 368/558 (66%), Gaps = 0/558 (0%)
Strand=Plus/Plus
Query 73438 TTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTCGTGACCTCATGGTA 73497
|||||| || | || | || || ||||| ||| || || || || || ||||||||
Sbjct 54803 TTGTGCCTATTTCGCTTTAGGGGGCTGGTTTACAGGTACAACCTTTGTAACTTCATGGTA 54862
Query 73498 CACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTAACTGCAGCAGTATC 73557
|| ||||| | || || ||| | || ||| ||||| ||||| || ||||| ||
Sbjct 54863 TACTCATGGATTGGCTAGTTCCTATTTGGAAGGATGCAATTTCTTAACCGCCGCAGTTTC 54922
Query 73558 AACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGACCAGAGGCACAAGG 73617
|| |||| || | | | ||| | ||||| || ||||| || || || |||||
Sbjct 54923 GACTCCTGCCAATAGTTTAGCACATTCGTTGTTGTTACTATGGGGTCCTGAAGCCCAAGG 54982
Query 73618 AGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTAGCATTACATGGAGT 73677
|||| | || |||| ||||| || || || |||| ||||| || | || || |
Sbjct 54983 AGATTTNACTCGTTGGTGCCAATTGGGCGGTCTGTGGACGTTTGTTGCTCTCCACGGCGC 55042
Query 73678 CTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGATACG 73737
|| ||||| |||||||| ||| | | || ||||| |||| | |||| | ||
Sbjct 55043 TTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCG 55102
Query 73738 TCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACGAGCATCTTTCTAAT 73797
||||| || ||| | || || || || || || || || | || || ||
Sbjct 55103 ACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGAT 55162
Query 73798 ATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCAGCAATCTT 73857
||||| |||| ||| | |||||||||| || || || ||||| || || || ||
Sbjct 55163 TTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCGGCTATATT 55222
Query 73858 TCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTTCATATGAT 73917
||| | || | || | || || || || ||| || | || ||||||||||||||
Sbjct 55223 TCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGAT 55282
Query 73918 GGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCAACAGTACA 73977
||| || || ||| || | || | || | ||||| || || |||||||| | ||| |
Sbjct 55283 GGGAGTTGCCGGTGTATTGGGCGCGGCTCTGCTATGCGCTATCCATGGTGCTATTGTAGA 55342
Query 73978 GAACACATTGTATGAAGA 73995
|| || || | ||||||
Sbjct 55343 AAATACTTTATTTGAAGA 55360
>seq752
Length=193215
Score = 147 bits (162), Expect = 3e-30
Identities = 372/566 (66%), Gaps = 0/566 (0%)
Strand=Plus/Minus
Query 73430 CTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTCGTGACC 73489
|| || |||||||| || | || | || || ||||| ||| || || || || ||
Sbjct 189612 CTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGCTGGTTTACAGGTACAACCTTTGTAACT 189553
Query 73490 TCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTTTTTAACTGCA 73549
|||||||| || ||||| | || || ||| | || ||| ||||| ||||| ||
Sbjct 189552 TCATGGTATACTCATGGATTGGCTAGTTCCTATTTGGAAGGATGCAATTTCTTAACCGCC 189493
Query 73550 GCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTGGGGACCAGAG 73609
||||| || || |||| || | | | ||| | ||||| || || || || ||
Sbjct 189492 GCAGTTTCGACTCCTGCCAATAGTTTAGCACATTCGTTGTTGTTACTATGAGGTCCTGAA 189433
Query 73610 GCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTAGCATTA 73669
|| ||||||||| | || |||| ||||| || || || |||| ||||| || |
Sbjct 189432 GCCCAAGGAGATTTGACTCGTTGGTGCCAATTGGGCGGTCTGTGGACGTTTGTTGCTCTC 189373
Query 73670 CATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTT 73729
|| || || ||||| |||||||| ||| | | || |||| |||| | ||||
Sbjct 189372 CACGGCACTTTCGGACTAATAGGTTTTATGTTACGTCAAATTGAACTTGCTCGGTCTGTT 189313
Query 73730 GGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATTCACGAGCATC 73789
| || ||||| || ||| | || || || || || || || || |
Sbjct 189312 CAATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTA 189253
Query 73790 TTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCA 73849
|| || || ||||| |||| ||| | |||||||||| || || || ||||| ||
Sbjct 189252 TTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAGTTTTGGTGTAGCG 189193
Query 73850 GCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTT 73909
|| || ||||| | || | || | || || || || ||| || | || ||||||
Sbjct 189192 GCTATATTTCGATTCATCCTTTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTT 189133
Query 73910 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 73969
||||||||||| || || ||| || | || | || | ||||| || || ||||||||
Sbjct 189132 CATATGATGGGAGTTGCCGGTGTATTGGGCGCGGCTCTGCTATGCGCTATCCATGGTGCT 189073
Query 73970 ACAGTACAGAACACATTGTATGAAGA 73995
|| ||| | || || || | ||||||
Sbjct 189072 ACTGTAGAAAATACTTTATTTGAAGA 189047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572674748412520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |