Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30] 27,769 sequences; 726,710,453 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1057 95.1 1e-14 seq670 95.1 1e-14 seq1068 89.7 5e-13 seq1034 86.0 6e-12 >seq1057 Length=141302 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| || || |||||||| || || || || || || || ||||| ||| Sbjct 136071 GTTGATTCCTTCTGAATGTTGTAGTCAGCCAAGGTCCTGCCATCCTCAAGCTGTTTTCCA 136130 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| ||||||| | |||||| || ||||| || ||||||||||| |||||| ||| Sbjct 136131 GCAAAGATCAGCCTTTGCTGGTCCGGAGGAATCCCTTCTTTGTCCTGAATTTTGGTCTTT 136190 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | || |||| | || || || | ||| | |||||||| ||||| || Sbjct 136191 ACATTGTCAATGGTATCTGAGCTCTCCACCTCCAAAGTTATAGTCTTGCCAGTCAAGGTC 136250 Query 137395 TTTACGAATATTTGCAT 137411 || || ||||| ||||| Sbjct 136251 TTCACAAATATCTGCAT 136267 >seq670 Length=332965 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 ||||| || || || |||||||||||| || || | ||||||||| ||||| || Sbjct 147837 GTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCTTCGAGCTGTTTTCCG 147778 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| || || |||||||||||||| |||||||| ||||| || || || Sbjct 147777 GCGAAGATGAGGCGCTGCTGATCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGGACTTG 147718 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | ||| || || | || | ||||||||||| | ||| Sbjct 147717 ACATTATCTATGGTGTCAGAGCTTTCGACCTCTAGCGTGATTGTCTTGCCGGTTAGGGTT 147658 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 147657 TTGACGAAGATCTGCAT 147641 >seq1068 Length=260286 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || || || |||||||||||| || |||| ||||||||| ||||| || Sbjct 186295 GTGGACTCCTTCTGGATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGCTGTTTCCCG 186354 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || |||| || || |||||||||||||| || ||||| ||||| || || || Sbjct 186355 GCGAAGATAAGGCGCTGCTGATCGGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTG 186414 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || || ||||| | | || || || | || | ||||||||||| | ||| Sbjct 186415 ACGTTGTCTACGGTGTCGGAGCTCTCGACCTCGAGCGTGATTGTCTTGCCGGTTAGGGTT 186474 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| || ||||| Sbjct 186475 TTGACGAAGATCTGCAT 186491 >seq1034 Length=134858 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| || ||||||||||| || || || || ||||| || ||||| ||| Sbjct 72971 GTTGATTCCTTCTGTATGTTGTAGTCTGCCAAAGTCCTGCCATCTTCAAGCTGTTTTCCA 72912 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||||| | ||||| || ||||| || || |||||||| ||| ||| || Sbjct 72911 GCAAAGATCAACCTCTGCTGGTCTGGAGGGATTCCCTCTTTGTCTTGAATCTTTGCCTTC 72852 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||||| | || || || | || | |||||||| || || || Sbjct 72851 ACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAGCGTGATGGTCTTGCCAGTTAAGGTC 72792 Query 137395 TTTACGAATATTTGCAT 137411 || |||||||| ||||| Sbjct 72791 TTCACGAATATCTGCAT 72775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488374420270800