Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquilaria_20agallochum_20[genbank_20GCA_5F000696445.1_202014-05-30]
27,769 sequences; 726,710,453 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq715 138 9e-28
>seq715
Length=381403
Score = 138 bits (152), Expect = 9e-28
Identities = 241/344 (70%), Gaps = 5/344 (1%)
Strand=Plus/Minus
Query 43943 TTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATA 44002
|| || || || || || ||||| || || ||||| || || ||||| ||||| ||| |
Sbjct 115584 TTATACGGCTTCCAGATCGCCATCGAGAACATTCACTCTGAGATGTATAGTCTCCTGCTC 115525
Query 44003 GATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTA 44062
|| || ||| |||| ||| | |||||| | | | || | || || ||||| ||
Sbjct 115524 GAAACCTACGTCAAGGATTCCAATGAGAAGAACAAACTCTTCCACGCCATCGAAACGGTG 115465
Query 44063 CC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTT 44121
|| |||| | | | || || || ||||| || |||||||| | | | || ||
Sbjct 115464 CCGTGCGTCCAGA-AGAAGGCTGAGTGGGCGCTGAAATGGATCGACGGATCCAAGTCGTT 115406
Query 44122 TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT-TG 44180
| || || || ||||||| || ||||| || |||||||| || ||| || ||
Sbjct 115405 CGCGGAGCGGCTCCTCGCGTTCGCTTGCGTGGAGGGGATTTTCTTCTCTGGAAGCTTCTG 115346
Query 44181 CGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGT 44240
|| | ||||||||||| || || || |||| ||||||||||||||| || || || ||||
Sbjct 115345 CG-CGATATTTTGGTTGAAAAAGCGGGGTT-GATGCCTGGGTTGACTTTCTCGAACGAGT 115288
Query 44241 TAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284
| || || ||||||||| | || |||||||| || ||||||
Sbjct 115287 TGATCTCGCGAGATGAAGGCCTTCACTGCGATTTCGCGTGCTTG 115244
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397321487102845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |