Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1013 116 3e-21
seq687 104 2e-17
seq980 100 2e-16
seq713 100 2e-16
seq530 100 2e-16
seq1780 91.5 1e-13
seq1311 91.5 1e-13
seq1891 87.8 1e-12
seq912 86.0 5e-12
seq788 86.0 5e-12
seq507 84.2 2e-11
>seq1013
Length=1118043
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| ||||||| | || || |||||||| || || ||||| || |||||||||||
Sbjct 384609 CCTCCTCTCAGACGTAGCACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGCG 384668
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| |||| ||||||| |||||||| || ||| | ||||| ||||| || || |||
Sbjct 384669 AGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGG 384728
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| ||||| ||| || ||| || ||| | || || || || ||| ||
Sbjct 384729 ATTCCTTCCTTGTCTTGAATCTTCGCT-TTCACATTGTCGATTGTGTCTGATGATTCAAC 384787
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|||||||| || || || || || || ||||| || || || ||||| ||
Sbjct 384788 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 384838
>seq687
Length=897029
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || ||||| ||||||||||| ||| | | | || || | |||
Sbjct 268728 TGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCAAGTTGC 268669
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279
||||||||| | || | | |||||||| || |||||||||||||| ||| ||
Sbjct 268668 TTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGAATCTTA 268609
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| || ||| | || ||||| || | || || |||| |||||||||||||| ||
Sbjct 268608 GCT-TTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTACCGGT 268550
Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363
|||||||| ||||| || |||||
Sbjct 268549 AAGAGTTTTCACAAATATCTGCAT 268526
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||||||||| || | ||| || |||||||| || |||||||| || ||||||||
Sbjct 268068 CCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAGCC 268009
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | | | |||| || | |||||| || || | || | | || ||||| ||
Sbjct 268008 AAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCGGG 267949
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| ||||| || ||||| ||| ||| | || || || || |||| ||
Sbjct 267948 ATTCCTTCCTTGTCTTGGATCTTTGC-CTTGACATTGTCAATTGTGTCAGAGCTTTCGAC 267890
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | || ||||| || || || ||||| || || || || ||||||
Sbjct 267889 CTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCATA 267841
>seq980
Length=1630315
Score = 100 bits (110), Expect = 2e-16
Identities = 171/243 (70%), Gaps = 4/243 (2%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195
|||||||| || || | ||| ||||| || || || || || || || |||||||| ||
Sbjct 2852 CCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCC 2911
Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255
|| | | | ||||||| ||||| |||||| | ||||| | || ||||| ||
Sbjct 2912 AAGG-TACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGG 2970
Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
||| ||||| || || ||| ||||| ||| ||| | || ||||| || | || |
Sbjct 2971 AATACCTTCCTTATCCTGAATCTTTGC-CTTAACATTGTCAATGGTGTCAGAGCTCTCAA 3029
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374
| || | |||||||| || || || || ||||| || ||||||||||| | |||| |
Sbjct 3030 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCATCTGGAAAAACA 3089
Query 15375 AAA 15377
|||
Sbjct 3090 AAA 3092
>seq713
Length=176098
Score = 100 bits (110), Expect = 2e-16
Identities = 171/243 (70%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195
|||||||| || || | ||| ||||| || || || || || || || |||||||| ||
Sbjct 45528 CCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCC 45469
Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255
|| | | | ||||||| ||||| |||||| | ||||| | || ||||| ||
Sbjct 45468 AAGG-TACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGG 45410
Query 15256 AATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
||| ||||| || || ||| ||||| ||| ||| | || ||||| || | || |
Sbjct 45409 AATACCTTCCTTATCCTGAATCTTTGC-CTTAACATTGTCAATGGTGTCAGAGCTCTCAA 45351
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATA 15374
| || | |||||||| || || || || ||||| || ||||||||||| | |||| |
Sbjct 45350 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCATCTGGAAAAACA 45291
Query 15375 AAA 15377
|||
Sbjct 45290 AAA 45288
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| || ||||| || || || || || ||||||||||| || | | | | || ||
Sbjct 46423 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTCCGACCATCCTC 46364
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| ||||| |||||| | || | | |||||||| ||| || || || |||||
Sbjct 46363 GAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTG 46304
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||| || ||| ||| | || || || || | || || || || |||||||| ||
Sbjct 46303 AATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAAMGTAATGGTCTT 46244
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||||| |||||| ||||| |||||||||
Sbjct 46243 GCCTGTCAAAGTTTTCACAAAGATTTGCATA 46213
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | | | || ||||||||||| || |||||||| |||||||||||
Sbjct 45756 CCACCTCTGAGACGAAGCACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAGCG 45697
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | |||| || | || || ||||| | || | | || || || ||
Sbjct 45696 AGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGG 45637
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| || || ||| || ||| || ||| | || || ||||| | |||| ||
Sbjct 45636 ATTCCTTCCTTATCCTGAATCTTAGCT-TTAACATTATCAATAGTATCAGAACTTTCAAC 45578
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || |||||||| || |||| || || |||||||| ||||||
Sbjct 45577 CTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCATA 45529
>seq530
Length=553347
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || || ||||| ||||| || || || ||||||||||| | | |||| | |||
Sbjct 260425 AAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTTCTGCCATCT 260366
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | ||| || || ||| | ||||| | || ||||| ||||| || ||||||||
Sbjct 260365 TCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCT 260306
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
||| ||| || ||| | || ||||| || | || || || || ||||||||
Sbjct 260305 TGAATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACTTCCAAAGTAATGGTC 260246
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| ||||||| || || |||||||| ||||||
Sbjct 260245 TTTCCTGTCAATGTCTTGACAAAAATCTGCATA 260213
>seq1780
Length=424430
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || || ||||| ||||||||||| ||| | | | || || | |||
Sbjct 97026 TGAAGTGTTGACTCCTTTTGGATGTTGTAATCAGCAAGAGTGCGGCCATCCTCAAGCTGT 97085
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
|| |||||| | || | | |||||||| |||||| ||||||||||| || |||
Sbjct 97086 TTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTG 97145
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||||||| | || || ||||| | || || || || || || || || || ||
Sbjct 97146 GCCTTTACATTGTCGATTGTATCCGAGCTCTCAACTTCCAAAGTTATAGTCTTTCCGGTA 97205
Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363
||||| || ||||||| ||||||
Sbjct 97206 AGAGTCTTGACAAAAACTTGCAT 97228
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||| | | || | ||| || || || |||||||| |||||||||||
Sbjct 97458 CCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCTGCA 97517
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| ||| | || || | ||||| |||||| | || | | ||||| || ||
Sbjct 97518 AGCGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGGAGGG 97577
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| ||||| || || ||| || || | || ||||| || | | || ||
Sbjct 97578 ATTCCTTCCTTGTCTTGGATCTTAGCT-TTAACGTTGTCAATGGTGTCTGAACTCTCGAC 97636
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|||| ||||||||||||||| || || || || || || || ||||||
Sbjct 97637 TTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACGAATATCTGCATA 97685
>seq1311
Length=673479
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | | | || ||||| || || || ||||| || |||||||| ||
Sbjct 79831 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCA 79772
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| |||| |||| || | || || || || | || | | |||||||| |||
Sbjct 79771 AGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGA 79712
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|||||||| ||||| || ||| || ||| | || ||||| || | | || ||
Sbjct 79711 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCAACC 79652
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | ||||||||||||||| || || || || ||||| || ||||||
Sbjct 79651 TCGAGGGTAATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCATA 79604
>seq1891
Length=27579
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| || ||||| || || || || || ||||||||||| || | | | | || ||
Sbjct 10294 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTCCGACCATCCTC 10353
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| ||||| |||||| | || | | |||||||| ||| || || || |||||
Sbjct 10354 GAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTG 10413
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||| || ||| ||| | || || || || | || || || || |||||||| ||
Sbjct 10414 AATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTT 10473
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||||| |||||| ||||| |||||||||
Sbjct 10474 GCCTGTCAAAGTTTTCACAAAGATTTGCATA 10504
Score = 87.8 bits (96), Expect = 1e-12
Identities = 167/242 (69%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| || || | ||| ||||| || || || || || || || |||||||||
Sbjct 11417 CCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCC 11476
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | | | || || | ||||| || ||| | ||||| | || ||||| |||
Sbjct 11477 AAGGTACGACCATCCTCCAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 11536
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||| || || ||| ||||| ||| ||| | || ||||| || | || ||
Sbjct 11537 ATACCTTCCTTATCCTGAATCTTTGC-CTTGACATTGTCAATGGTGTCAGAGCTCTCAAC 11595
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAA 15375
|| | |||||||| || || || || ||||| || ||||||||||| | ||||| ||
Sbjct 11596 CTCGAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT-CTGGAAAAAAA 11654
Query 15376 AA 15377
||
Sbjct 11655 AA 11656
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| | | | || ||||| ||||| || ||||| || || ||||||||
Sbjct 10961 CCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAGCG 11020
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | |||| || | || || ||||| | || | | || || || |||
Sbjct 11021 AGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 11080
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| ||||| ||| || ||| || ||| | || || ||||| | |||| ||
Sbjct 11081 ATTCCTTCCTTGTCCTGAATCTTAGCT-TTAACATTGTCAATCGTATCCGAACTTTCAAC 11139
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || ||||||||||| ||||||| || || ||||| || ||||||
Sbjct 11140 CTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCATA 11188
>seq912
Length=1276171
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| || ||||| || || || || || ||||||||||| ||| | | | || ||
Sbjct 752279 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTC 752220
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| ||||| |||||| | || | | |||||||| || || ||||| |||||
Sbjct 752219 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTG 752160
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||| ||| ||| || | || || || || | || || || |||||||| || ||
Sbjct 752159 AATCTTGGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTT 752100
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|||||||| ||| || ||||| ||||||||
Sbjct 752099 ACCTGTCAAAGTCTTCACAAAGATTTGCAT 752070
>seq788
Length=1574065
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210
||| || ||||||||||| || || || || |||||||| || | | |||| ||||
Sbjct 108237 TAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTGCCGTC 108178
Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270
||| | ||| || || ||| | ||||| | || ||||| ||||| || ||||||||
Sbjct 108177 TTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCTTTGTC 108118
Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
|| ||| || ||| | || ||||| || | || || || || || || ||
Sbjct 108117 CTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCYACCTCCAAAGTGATAGT 108058
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || |||| || || || || |||||||||
Sbjct 108057 CTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 108024
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210
||| || ||||||||||| || || || || |||||||| || | | |||| ||||
Sbjct 100801 TAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTGCCGTC 100742
Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270
||| | ||| || || ||| | ||||| | || ||||| ||||| || ||||||||
Sbjct 100741 TTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCTTTGTC 100682
Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
|| ||| || ||| | || ||||| || | || || || || || || ||
Sbjct 100681 CTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTGATAGT 100622
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || |||| || || || || |||||||||
Sbjct 100621 CTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 100588
>seq507
Length=413332
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| || | | ||| || || || || || ||||| || ||||||||||||
Sbjct 378517 CCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCC 378458
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | | | | || || | ||||| ||||| | || | | ||| ||||| |||
Sbjct 378457 AAAGTACGACCATCCTCAAGCTGTTTCCCAGCAAAGATAAGTCTTTGCTGGTCAGGAGGA 378398
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||| ||||| || ||||| ||| ||| | || ||||| || | || ||
Sbjct 378397 ATACCTTCCTTGTCCTGGATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 378339
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| | |||||||| || || || || ||||| || |||||||||||
Sbjct 378338 CTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 378291
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| || ||||| || || || || || ||||||||||| ||| | | | || ||
Sbjct 379412 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGACCATCCTC 379353
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| ||||| |||||| |||| | | |||||||| || || ||||| |||||
Sbjct 379352 AAGCTGTTTCCCAGCGAATATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTG 379293
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||| ||| ||| || | || || || || | || || || | |||||| || ||
Sbjct 379292 AATCTTGGCCTTGACGTTATCAATAGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCTT 379233
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||||| ||| || ||||| |||||||||
Sbjct 379232 GCCTGTCAAAGTCTTCACAAAGATTTGCATA 379202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362169316921899
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |