Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq788 113 4e-20 seq1891 98.7 8e-16 seq1206 91.5 1e-13 seq912 91.5 1e-13 seq713 91.5 1e-13 seq530 87.8 2e-12 seq1311 86.0 5e-12 seq687 82.4 6e-11 seq400 82.4 6e-11 >seq788 Length=1574065 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | ||||| || ||||| || |||||| || ||||||||||| || Sbjct 101044 ACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGC 100985 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || ||||||||| |||||| ||| || | || || | |||||| ||| || Sbjct 100984 CAAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 100925 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | || |||||| ||| || || |||| | | | ||||| || | | |||| Sbjct 100924 GATACCTTCCTTATCCTGGATCTT-GGCTTTCACGTTGTCGATGGTGTCTGAACTCTCCA 100866 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| || ||||||||||| ||||||||||||||||| Sbjct 100865 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | ||||| || ||||| || |||||| || ||||||||||| || Sbjct 108480 ACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGC 108421 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||||| ||| || ||| || | || || | |||||| ||| || Sbjct 108420 CAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 108361 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||| ||| || || ||| | | || || || | | |||| Sbjct 108360 GATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCAC 108301 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| || ||||||||||| ||||||||||||||||| Sbjct 108300 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || || || ||||| || |||||| || |||||||| |||||||| || | ||| Sbjct 693559 AAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCC 693500 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 ||||||||||| ||| || | || || | |||||| ||| || | | |||||| ||| Sbjct 693499 TCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 693440 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 || || ||||| | |||||||| | ||| ||| | || ||||| Sbjct 693439 TGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCTCTCTACCTCCAAGGTGATGGTC 693380 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||||||||| ||||| || |||||||| Sbjct 693379 TTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 693348 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || || ||||| || |||||| || |||||||| |||||||| || | ||||| Sbjct 101253 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCCTCA 101194 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| || || | || | ||||||||| ||| || | || |||||||||| Sbjct 101193 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 101134 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || || ||| | | ||||| |||| |||| || | || ||||| || Sbjct 101133 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTT 101074 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| | ||| ||||| ||||||||||| Sbjct 101073 CCGGTCAAAGTCTTCACGAAAATCTGCAT 101045 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || || ||||| || |||||| || |||||||| || ||||| || | ||||| Sbjct 694012 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCG 693953 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 |||||||| || || | || | ||||||||| ||| || | || |||||| ||| Sbjct 693952 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTGG 693893 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || || ||| | | ||||| |||| |||| ||| | ||| || || || Sbjct 693892 ATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATAGTCTTC 693833 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| ||||| ||||| ||||||||||| Sbjct 693832 CCGGTCAGAGTCTTCACGAAAATCTGCAT 693804 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| |||| | |||||| |||||||| || |||||| ||||||||||| ||||| Sbjct 100816 ACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGC 100757 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || |||| || || ||||| ||| || | || || | |||||| ||| || Sbjct 100756 CAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 100697 Query 48619 CACACTTTCCTTGTCC 48634 | || || |||||| Sbjct 100696 AATACCCTCTTTGTCC 100681 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| |||| | |||||| |||||||| || |||||| ||||||||||| ||||| Sbjct 108252 ACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGC 108193 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || |||| || || ||||| ||| || | || || | |||||| ||| || Sbjct 108192 CAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 108133 Query 48619 CACACTTTCCTTGTCC 48634 | || || |||||| Sbjct 108132 AATACCCTCTTTGTCC 108117 >seq1891 Length=27579 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48509 AACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGC 48568 ||||| | || ||||| ||||| ||||| || || |||||||| ||||| || Sbjct 11426 AACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTACGA 11485 Query 48569 TCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCC 48628 | ||||||||||| |||||| || | || || | |||||| ||| || | || |||| Sbjct 11486 CCATCCTCCAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCTTCC 11545 Query 48629 TTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688 || ||| ||| || ||||| | | ||||| || | ||| ||||| || Sbjct 11546 TTATCCTGAATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTA 11605 Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || || || || |||||||| ||||| |||||| Sbjct 11606 ATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCATC 11644 >seq1206 Length=1516661 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || ||||||||||| || || || |||| || |||||||| ||| || || Sbjct 451407 TCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAA 451466 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || || |||||||| ||| || | || ||||||||| || || ||||| | Sbjct 451467 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 451526 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||||| ||| | || || || || || || || |||||||| Sbjct 451527 TCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACG 451586 Query 48716 AAAATCTGCATCGTGTCTTG 48735 || ||||||||| | | ||| Sbjct 451587 AAGATCTGCATCTTTTTTTG 451606 >seq912 Length=1276171 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||| ||||| || || || || |||||||||||||| || | || || Sbjct 751138 ACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCCAAGGTACGGCCATCTTCT 751079 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 ||||||||||| || | || || | ||||| ||| || | || |||||||||| Sbjct 751078 AGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGG 751019 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || || ||| | | | ||||| || | | ||| ||||| || ||||| ||| Sbjct 751018 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTA 750959 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || ||||| ||||||||||||| |||||| Sbjct 750958 CCAGTGAGTGTTTTCACAAAAACTTGCATC 750929 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC-GTCCTCCAGCTG 48582 |||||||| |||||| || |||||||| ||||| || ||| || |||||| ||||| Sbjct 751360 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGC-AAGAGTCCTTCCGTCCTCAAGCTG 751302 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || |||| | | |||||| ||| || | | |||||||||| ||| || Sbjct 751301 CTTACCAGCGAAAATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATCTT 751242 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | || || || | | || ||| | || |||||||| || || Sbjct 751241 TGCCTTGACGTTGTCAATAGTGTCAGAACTTTCAACCTCAAGGGTGATGGTTTTGCCAGT 751182 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || ||||| |||||||| Sbjct 751181 CAGAGTCTTGACAAAGATCTGCAT 751158 >seq713 Length=176098 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| |||||||| || ||| |||||||||||||||||||| | | || ||||||| Sbjct 45739 CACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAGCGAGTGTGCGACCGTCCTC 45680 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| | | || | | |||||||||| || | | |||||| ||| Sbjct 45679 AAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 45620 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || || | | | || ||||| | | || ||| | || |||||||| Sbjct 45619 AATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTT 45560 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || | || ||||||||||||||||| Sbjct 45559 GCCAGTCAACGTCTTCACAAAAATCTGCAT 45530 >seq530 Length=553347 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || || || || ||| ||||| || || ||||||||||| Sbjct 259985 ACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGC 259926 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||||| ||| || ||| || |||| | | |||||||||| || Sbjct 259925 CAACGTGCGACCATCCTCCAACTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGG 259866 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | |||||||||| || || ||| | | | || ||||| || | ||| Sbjct 259865 AATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCG--ATGGTGTCAGAGCTTTCC 259808 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || || || |||||||||||||| || || || ||||||||| Sbjct 259807 ACCTCGAGGGTGATAGTCTTACCGGTGAGAGTCTTAACGAAGATCTGCATC 259757 >seq1311 Length=673479 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||| || || ||| || || |||||||| ||||| | || ||||||| Sbjct 79814 CACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTC 79755 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||||||| | | || | | ||| || ||| || | | |||||||||| Sbjct 79754 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 79695 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || |||| | | ||||| || | | ||| ||||| || |||||||| Sbjct 79694 GATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCAACCTCGAGGGTAATGGTTTT 79635 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| ||||| || |||||||| |||||||| Sbjct 79634 ACCAGTGAGGGTCTTCACAAAGATCTGCAT 79605 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | ||||| | ||||| || ||||| ||||||||||||||||| Sbjct 80060 ACCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGC 80001 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || | ||||| ||||| ||||| || | || | | ||| || || || Sbjct 80000 TAAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 79941 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||||| ||| || ||||| | | || || || | |||| Sbjct 79940 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCCAC 79881 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | |||||||| || ||||| || || |||||||| |||||||| Sbjct 79880 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 79833 >seq687 Length=897029 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || | |||||| | || || ||||| || ||| |||||||| ||||||||||| Sbjct 268069 ACCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAGC 268010 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || ||||||| || || |||||| | | || | | |||||| ||| ||| Sbjct 268009 CAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCGG 267950 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG- 48677 | | ||||||||| || || ||||| | | || || || | || | || Sbjct 267949 GATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCAG-AGCTTTCGA 267891 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | |||||||| || || || ||||| || || || |||||||| Sbjct 267890 CCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 267842 >seq400 Length=13612 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | ||||| | ||||| || ||||| || |||||||||||||| Sbjct 1362 ACCACCACGCAGACGCAACACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGC 1421 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||| ||||| ||||| || | || | | ||| || || || Sbjct 1422 CAAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 1481 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||||| ||| || ||||| | | || || || | |||| Sbjct 1482 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 1541 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | |||||||| || ||||| || || |||||||| |||||||| Sbjct 1542 CTCCAAAGTTATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 1589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421239704976239