Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq788 111 1e-19 seq530 105 5e-18 seq400 102 7e-17 seq1311 98.7 8e-16 seq687 95.1 1e-14 seq912 89.7 4e-13 seq895 84.2 2e-11 seq1780 82.4 6e-11 >seq788 Length=1574065 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || |||||||| || ||||||||||| || Sbjct 693802 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCT 693743 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | ||||| || || | || || ||||| |||||| ||| Sbjct 693742 AAGGTGCGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 693683 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || |||||| | | | | ||||| | |||| Sbjct 693682 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTGTCAATGGTGTCTGAGCTCTCCA 693625 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||| || ||||||| || |||||||| |||||||| Sbjct 693624 CTTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCAT 693576 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || |||||||| || |||||||| || ||| Sbjct 108479 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 108420 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||||||| ||||| || || | || | || ||| |||||| ||| Sbjct 108419 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 108360 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || || || || |||||| | | | | |||||| |||| Sbjct 108359 ATACCTTCCTTATCCTGGATCTTGGC--CTTCACGTTGTCAATAGTGTCTGAACTCTCCA 108302 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| |||||||| || || || |||||||||||||| Sbjct 108301 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | | |||| ||| || || |||||||| || ||||||||||| ||| Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | ||| || || || | || | || ||| |||||| ||| Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | | ||||| | |||| Sbjct 100695 ATACCCTCTTTGTCCTGGATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCCA 100638 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || ||||| |||| ||| ||||| || || ||||| Sbjct 100637 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || |||||||| || |||||||| || ||| Sbjct 101043 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 100984 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||||||||| || || || || | || | || ||| |||||| ||| Sbjct 100983 AAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 100924 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || || || ||| ||||| | | | | ||||| |||| Sbjct 100923 ATACCTTCCTTATCCTGGATCTTGGCT--TTCACGTTGTCGATGGTGTCTGAACTCTCCA 100866 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| |||||||| || || || |||||||||||||| Sbjct 100865 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || ||||||||||| || Sbjct 108023 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 107964 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | |||||||| || || || || | || | || ||| || ||| ||| Sbjct 107963 AGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 107904 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || |||||| | | | | ||||| |||| Sbjct 107903 ATACCCTCCTTATCTTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAACTCTCCA 107846 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || |||||| | || || || ||||| ||||||||||| Sbjct 107845 CTTCAAGAGTAATAGTTTTTYCCGTTAGGGTCTTGACGAAAATCTGCAT 107797 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | | |||| ||| || || |||||||| || ||||||||||| ||| Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | ||| || || || | || | || ||| |||||| ||| Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | | ||||| | ||| Sbjct 108131 ATACCCTCTTTGTCCTGGATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCYA 108074 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || ||||| |||| ||| ||||| || || ||||| Sbjct 108073 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || ||||||||||| || Sbjct 100587 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 100528 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | |||||||| || || || || | || | || ||| || ||| ||| Sbjct 100527 AGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 100468 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || |||||| | | | | ||||| |||| Sbjct 100467 ATACCCTCCTTATCTTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAACTCTCCA 100410 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || |||||| | || || || ||||| ||||||||||| Sbjct 100409 CTTCAAGAGTAATAGTTTTTTCCGTTAGGGTCTTGACGAAAATCTGCAT 100361 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||| |||| || | ||| Sbjct 101256 AGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCC 101197 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | || || ||||| |||||| ||| | || || ||||| Sbjct 101196 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCC 101137 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | |||||| | |||| ||| | |||||||| Sbjct 101136 TGGATCTTAGC--CTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGG 101079 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||||||||| || || || ||||||||||| Sbjct 101078 TCTTTCCGGTCAAAGTCTTCACGAAAATCTGCAT 101045 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || ||||||||||| || Sbjct 100259 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 100200 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | |||||||| || || || || | || | || ||| || ||| ||| Sbjct 100199 AGTGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 100140 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| || || || || || ||| || | | | | ||||| | ||| Sbjct 100139 ATGCCCTCCTTATCTTGGATCTTAGC--CTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 100082 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || |||||||| || || || || || |||||||| Sbjct 100081 CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 100033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || |||||||| || ||||||||||| ||| Sbjct 108707 CCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 108648 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| | ||||| || || | || || ||||| |||||| ||| Sbjct 108647 AAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 108588 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || |||||| | | | | ||||| | ||| Sbjct 108587 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGAGCTCTCGA 108530 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||| || || || |||| || ||||| || |||||||| Sbjct 108529 CTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 108481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || |||||||| || ||||||||||| ||| Sbjct 693346 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 693287 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || || | ||| || || || | || | | ||| |||||| || Sbjct 693286 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 693227 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || || ||| || | | | | ||||| |||| Sbjct 693226 ATACCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCAGAACTCTCCA 693169 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || ||||| |||| || ||||| ||||||||||| Sbjct 693168 CCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120 >seq530 Length=553347 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || ||||||||||| || |||||||| || ||| Sbjct 260440 CCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCC 260381 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || || | ||| || || || | || | || ||| |||||| ||| Sbjct 260380 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 260321 Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | | ||||| | |||| Sbjct 260320 ATACCCTCTTTGTCTTGAATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCCA 260263 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || ||||| ||||| |||| || ||||||||||||||||| Sbjct 260262 CTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214 >seq400 Length=13612 Score = 102 bits (112), Expect = 7e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || || |||||||| || ||||||||||| || | || | | ||| Sbjct 1834 AGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCC 1893 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | ||||||| ||| |||||| ||| | || |||||||| Sbjct 1894 TCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTCC 1953 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||||| || || | | | | |||||| | ||| ||||| || |||| Sbjct 1954 TGAATCTTTGCT--TTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGG 2011 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || |||||||| |||||||| Sbjct 2012 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || |||||||| || || ||||||||||| || | ||| | ||| Sbjct 1606 AGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCTAGGGTACGACCATCC 1665 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | ||||||| ||| |||||| ||| | |||||||| || Sbjct 1666 TCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCCTCTTTATCC 1725 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | | ||||| | ||| || | |||||| | Sbjct 1726 TGAATCTTAGCT--TTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATTG 1783 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || |||||||| || ||||| Sbjct 1784 TTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817 >seq1311 Length=673479 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | | ||||| | || Sbjct 79579 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGC 79520 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 || || ||| | ||||||| ||| |||||| ||| | || |||||||| || ||| Sbjct 79519 TTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTCCTGAATCTTT 79460 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | |||||| | ||| ||||| || ||||| || || | Sbjct 79459 GCT--TTAACGTTGTCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAG 79402 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||||||| |||||||| Sbjct 79401 TCAGAGTCTTGACAAAGATCTGCAT 79377 >seq687 Length=897029 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 |||||| | || || || ||||||||||| |||||||| || || | || | || Sbjct 268738 CAGTACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATC 268679 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 ||| | ||| ||||| || | ||||| | |||||||||| ||| | || |||||||| Sbjct 268678 CTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTC 268619 Query 16843 GGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || ||| ||||| | | | | ||||| | ||| ||| | || ||| Sbjct 268618 TTGAATCTTAGCT--TTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATG 268561 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||| || ||||| ||||| |||||||| Sbjct 268560 GTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 268526 >seq912 Length=1276171 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | || | ||||||| | || Sbjct 751360 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCCTCAAGCTGC 751301 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 || || || ||||||||| ||| |||||| ||| | || || ||||| || ||| Sbjct 751300 TTACCAGCGAAAATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATCTTT 751241 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| || || | |||||||||||| || | Sbjct 751240 GC--CTTGACGTTGTCAATAGTGTCAGAACTTTCAACCTCAAGGGTGATGGTTTTGCCAG 751183 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||||||| |||||||| Sbjct 751182 TCAGAGTCTTGACAAAGATCTGCAT 751158 >seq895 Length=2238827 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| ||||| |||||||| || |||||||||||||| | ||| | |||| Sbjct 1033406 AGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCT 1033465 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| ||||| || || |||| | ||||| |||||| || | || || ||||| Sbjct 1033466 TCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCT 1033525 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | | || ||| | || || | ||| |||| Sbjct 1033526 TGGATCTTCGCT--TTCACATTGTCGATGGTATCGGACGATTCAACCTCTAGGGTTATGG 1033583 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || ||||| || || |||||||| || Sbjct 1033584 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 1033620 >seq1780 Length=424430 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || ||||| || | ||| || || |||||||| || |||||||| || || Sbjct 97229 CCCACCACGGAGTCTCAGCACGAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 97288 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | || || | ||| ||||| ||| | || || | ||||||||| || Sbjct 97289 AAGAGTCCGACCATCTTCGAGTTGCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGG 97348 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || |||||||| ||| | ||||| | | | ||||| | ||| Sbjct 97349 GATCCCTTCTTTGTCCTGAATCTTGGACTTCAGGTTATCGATTGTGTCCGAGCTCTCAAC 97408 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || |||||||| || || ||||||||||||||||| Sbjct 97409 TTCCAAAGTTATCGTCTTTCCGGTAAGAGTCTTGACAAAAATCTGCAT 97456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405076946034610