Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq788 111 1e-19
seq530 105 5e-18
seq400 102 7e-17
seq1311 98.7 8e-16
seq687 95.1 1e-14
seq912 89.7 4e-13
seq895 84.2 2e-11
seq1780 82.4 6e-11
>seq788
Length=1574065
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || ||||| || |||| || || || |||||||| || ||||||||||| ||
Sbjct 693802 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCT 693743
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | ||||| || || | || || ||||| |||||| |||
Sbjct 693742 AAGGTGCGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 693683
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || ||||| || || || |||||| | | | | ||||| | ||||
Sbjct 693682 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTGTCAATGGTGTCTGAGCTCTCCA 693625
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | ||||||||| || ||||||| || |||||||| ||||||||
Sbjct 693624 CTTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCAT 693576
Score = 102 bits (112), Expect = 7e-17
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || |||| || || || |||||||| || |||||||| || |||
Sbjct 108479 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 108420
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | |||||||| ||||| || || | || | || ||| |||||| |||
Sbjct 108419 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 108360
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || || || || || || || |||||| | | | | |||||| ||||
Sbjct 108359 ATACCTTCCTTATCCTGGATCTTGGC--CTTCACGTTGTCAATAGTGTCTGAACTCTCCA 108302
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| |||||||| || || || ||||||||||||||
Sbjct 108301 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | | |||| ||| || || |||||||| || ||||||||||| |||
Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || |||| || | ||| || || || | || | || ||| |||||| |||
Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || || ||| || || | | | | ||||| | ||||
Sbjct 100695 ATACCCTCTTTGTCCTGGATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCCA 100638
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||| || ||||| |||| ||| ||||| || || |||||
Sbjct 100637 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || |||| || || || |||||||| || |||||||| || |||
Sbjct 101043 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 100984
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| |||||||||| || || || || | || | || ||| |||||| |||
Sbjct 100983 AAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 100924
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || || || || || || ||| ||||| | | | | ||||| ||||
Sbjct 100923 ATACCTTCCTTATCCTGGATCTTGGCT--TTCACGTTGTCGATGGTGTCTGAACTCTCCA 100866
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||||||| |||||||| || || || ||||||||||||||
Sbjct 100865 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || ||||| || || | ||| || || |||||||| || ||||||||||| ||
Sbjct 108023 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 107964
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| || | |||||||| || || || || | || | || ||| || ||| |||
Sbjct 107963 AGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 107904
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| || || || || || |||||| | | | | ||||| ||||
Sbjct 107903 ATACCCTCCTTATCTTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAACTCTCCA 107846
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | || || |||||| | || || || ||||| |||||||||||
Sbjct 107845 CTTCAAGAGTAATAGTTTTTYCCGTTAGGGTCTTGACGAAAATCTGCAT 107797
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | | |||| ||| || || |||||||| || ||||||||||| |||
Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || |||| || | ||| || || || | || | || ||| |||||| |||
Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || || ||| || || | | | | ||||| | |||
Sbjct 108131 ATACCCTCTTTGTCCTGGATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCYA 108074
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||| || ||||| |||| ||| ||||| || || |||||
Sbjct 108073 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || ||||| || || | ||| || || |||||||| || ||||||||||| ||
Sbjct 100587 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 100528
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| |||| || | |||||||| || || || || | || | || ||| || ||| |||
Sbjct 100527 AGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 100468
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||| || || || || || |||||| | | | | ||||| ||||
Sbjct 100467 ATACCCTCCTTATCTTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAACTCTCCA 100410
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | || || |||||| | || || || ||||| |||||||||||
Sbjct 100409 CTTCAAGAGTAATAGTTTTTTCCGTTAGGGTCTTGACGAAAATCTGCAT 100361
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || |||||||| || ||||||||||| |||| || | |||
Sbjct 101256 AGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCC 101197
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|| | || || || || | || || ||||| |||||| ||| | || || |||||
Sbjct 101196 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCC 101137
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || || |||||| | | | | |||||| | |||| ||| | ||||||||
Sbjct 101136 TGGATCTTAGC--CTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGG 101079
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| |||||||||| || || || |||||||||||
Sbjct 101078 TCTTTCCGGTCAAAGTCTTCACGAAAATCTGCAT 101045
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || ||||| || || | ||| || || |||||||| || ||||||||||| ||
Sbjct 100259 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 100200
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || | |||||||| || || || || | || | || ||| || ||| |||
Sbjct 100199 AGTGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 100140
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||| || || || || || ||| || | | | | ||||| | |||
Sbjct 100139 ATGCCCTCCTTATCTTGGATCTTAGC--CTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 100082
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | |||||| || |||||||| || || || || || ||||||||
Sbjct 100081 CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 100033
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || ||||| || |||| || || || |||||||| || ||||||||||| |||
Sbjct 108707 CCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 108648
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | ||||| | ||||| || || | || || ||||| |||||| |||
Sbjct 108647 AAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 108588
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || ||||| || || || |||||| | | | | ||||| | |||
Sbjct 108587 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGAGCTCTCGA 108530
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | ||||| || || || |||| || ||||| || ||||||||
Sbjct 108529 CTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 108481
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || |||| || || || |||||||| || ||||||||||| |||
Sbjct 693346 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 693287
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || | || || | ||| || || || | || | | ||| |||||| ||
Sbjct 693286 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 693227
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || || || ||| || | | | | ||||| ||||
Sbjct 693226 ATACCCTCTTTGTCTTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCAGAACTCTCCA 693169
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| ||||| || ||||| |||| || ||||| |||||||||||
Sbjct 693168 CCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120
>seq530
Length=553347
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || |||| || || ||||||||||| || |||||||| || |||
Sbjct 260440 CCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCC 260381
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || | || || | ||| || || || | || | || ||| |||||| |||
Sbjct 260380 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 260321
Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || || ||| || || | | | | ||||| | ||||
Sbjct 260320 ATACCCTCTTTGTCTTGAATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCCA 260263
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || ||||| ||||| |||| || |||||||||||||||||
Sbjct 260262 CTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214
>seq400
Length=13612
Score = 102 bits (112), Expect = 7e-17
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| || || |||||||| || ||||||||||| || | || | | |||
Sbjct 1834 AGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCC 1893
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || || || ||| | ||||||| ||| |||||| ||| | || ||||||||
Sbjct 1894 TCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTCC 1953
Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| |||||| || || | | | | |||||| | ||| ||||| || ||||
Sbjct 1954 TGAATCTTTGCT--TTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGG 2011
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || || ||||| || |||||||| ||||||||
Sbjct 2012 TCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| || |||||||| || || ||||||||||| || | ||| | |||
Sbjct 1606 AGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCTAGGGTACGACCATCC 1665
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || || || ||| | ||||||| ||| |||||| ||| | |||||||| ||
Sbjct 1666 TCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCCTCTTTATCC 1725
Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || ||| || || | | | | ||||| | ||| || | |||||| |
Sbjct 1726 TGAATCTTAGCT--TTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATTG 1783
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || || || || |||||||| || |||||
Sbjct 1784 TTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817
>seq1311
Length=673479
Score = 98.7 bits (108), Expect = 8e-16
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||||||||| || | ||| | | ||||| | ||
Sbjct 79579 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGC 79520
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850
|| || ||| | ||||||| ||| |||||| ||| | || |||||||| || |||
Sbjct 79519 TTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTCCTGAATCTTT 79460
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
||| || || | | | | |||||| | ||| ||||| || ||||| || || |
Sbjct 79459 GCT--TTAACGTTGTCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAG 79402
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || |||||||| ||||||||
Sbjct 79401 TCAGAGTCTTGACAAAGATCTGCAT 79377
>seq687
Length=897029
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
|||||| | || || || ||||||||||| |||||||| || || | || | ||
Sbjct 268738 CAGTACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATC 268679
Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842
||| | ||| ||||| || | ||||| | |||||||||| ||| | || ||||||||
Sbjct 268678 CTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTC 268619
Query 16843 GGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| || ||| ||||| | | | | ||||| | ||| ||| | || |||
Sbjct 268618 TTGAATCTTAGCT--TTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATG 268561
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||||| || ||||| ||||| ||||||||
Sbjct 268560 GTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 268526
>seq912
Length=1276171
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||||||||| || | || | ||||||| | ||
Sbjct 751360 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCCTCAAGCTGC 751301
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850
|| || || ||||||||| ||| |||||| ||| | || || ||||| || |||
Sbjct 751300 TTACCAGCGAAAATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATCTTT 751241
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
|| ||| || | | | | |||||| || || | |||||||||||| || |
Sbjct 751240 GC--CTTGACGTTGTCAATAGTGTCAGAACTTTCAACCTCAAGGGTGATGGTTTTGCCAG 751183
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || |||||||| ||||||||
Sbjct 751182 TCAGAGTCTTGACAAAGATCTGCAT 751158
>seq895
Length=2238827
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| ||| ||||| |||||||| || |||||||||||||| | ||| | ||||
Sbjct 1033406 AGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCT 1033465
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|||| ||||| || || |||| | ||||| |||||| || | || || |||||
Sbjct 1033466 TCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCT 1033525
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || ||| ||||| | | | | || ||| | || || | ||| ||||
Sbjct 1033526 TGGATCTTCGCT--TTCACATTGTCGATGGTATCGGACGATTCAACCTCTAGGGTTATGG 1033583
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938
| || || || || ||||| || || |||||||| ||
Sbjct 1033584 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 1033620
>seq1780
Length=424430
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| || || || ||||| || | ||| || || |||||||| || |||||||| || ||
Sbjct 97229 CCCACCACGGAGTCTCAGCACGAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 97288
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
| || | || || | ||| ||||| ||| | || || | ||||||||| ||
Sbjct 97289 AAGAGTCCGACCATCTTCGAGTTGCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGG 97348
Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| || |||||||| ||| | ||||| | | | ||||| | |||
Sbjct 97349 GATCCCTTCTTTGTCCTGAATCTTGGACTTCAGGTTATCGATTGTGTCCGAGCTCTCAAC 97408
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| || || || |||||||| || || |||||||||||||||||
Sbjct 97409 TTCCAAAGTTATCGTCTTTCCGGTAAGAGTCTTGACAAAAATCTGCAT 97456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405076946034610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |