Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1013 129 4e-25 seq713 120 2e-22 seq1891 111 1e-19 seq687 111 1e-19 seq980 107 1e-18 seq1780 105 4e-18 seq507 98.7 7e-16 seq400 96.9 2e-15 seq788 93.3 3e-14 seq912 89.7 3e-13 seq530 89.7 3e-13 seq895 87.8 1e-12 seq1676 82.4 5e-11 >seq1013 Length=1118043 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||| ||||||| ||| | |||||||||||| || || || || || |||||||||| Sbjct 384608 ACCTCCTCTCAGACGTAGCACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGC 384667 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | | |||| || |||||||||||||| || || | ||||| ||||| | || Sbjct 384668 GAGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGG 384727 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||| ||||| ||| || |||||||| | || || ||| |||||| Sbjct 384728 GATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAAC 384787 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||||| || || || || ||||| | |||||||||||| |||||||| || Sbjct 384788 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 384838 >seq713 Length=176098 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | ||| | |||||||||||| || ||| |||||||| |||||||||| Sbjct 45758 TACCACCTCTGAGACGAAGCACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAG 45699 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || |||| || | || || || ||||| || || | || ||||| | | Sbjct 45698 CGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAG 45639 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| || ||| ||| || || ||||| | | |||||| |||||||| Sbjct 45638 GGATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAA 45579 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || ||||| || ||||| || ||||| || |||||||| Sbjct 45578 CCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 45530 >seq1891 Length=27579 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | ||| | ||||||||| || || ||| || || ||||||||||||| Sbjct 10959 TACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAG 11018 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || |||| || | || || || ||||| || || | || ||||| | | Sbjct 11019 CGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAG 11078 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| |||||| ||| || || ||||| | | ||||| |||||||| Sbjct 11079 GAATTCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATCGTATCCGAACTTTCAA 11138 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| ||||| || ||||| || ||||| || |||||||| Sbjct 11139 CCTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 11187 >seq687 Length=897029 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | | ||||| ||||| || ||| ||||||||||||||||||| Sbjct 268070 TACCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAG 268011 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| |||| || | |||||| |||||||| || || | || || || | | Sbjct 268010 CCAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCG 267951 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| ||||| || ||| ||| ||||| | | || || ||||| | Sbjct 267950 GGATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGCTTTCGA 267891 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | || || ||||| |||||||| Sbjct 267890 CCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 267842 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| || | ||||| || | ||||| || ||||||||| || |||||||| | Sbjct 268752 CCACCACTAAGACGCAGTACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCA 268693 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | || | || || | ||| || || || || || || | ||||| || | ||| Sbjct 268692 AGAGTGCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGG 268633 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||| ||| || |||||||| | | || ||| || |||||| Sbjct 268632 ATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACT 268573 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| ||||| |||||||| || | |||||||| ||||||||||| Sbjct 268572 TCTAGAGTAATGGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 268526 Score = 98.7 bits (108), Expect = 7e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||| | | |||| || ||| | ||||||||||||||||||||||| Sbjct 267842 TACCACCTCTCAACCTAAGGGCCAAGTGGAGAATTGACTCCTTTTGAATATTGTAATCAG 267783 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | |||||| |||||||| || || ||||| || || | Sbjct 267782 CCAAAGTACGGCCATCCTCGAGTTGTTTACCGGCAAAGATAAGTCGTTGCTGGTCTAGAG 267723 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| || | | ||| ||||| | || || | |||||||| Sbjct 267722 GAATCCCTTCTTTGTCTTGGATCTGTGCCTTGACATTATTGATGGTGTAGGAACTTTCAA 267663 Query 38269 CTTCTAATGTAATAGTTTT 38287 | || | || || ||||| Sbjct 267662 CATCGAGGGTTATGGTTTT 267644 >seq980 Length=1630315 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | ||| | ||||||||| || || ||| || || ||||||||||||| Sbjct 2622 TACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAG 2681 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || |||| || | || || || ||||| || || | || ||||| | | Sbjct 2682 CGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAG 2741 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||| ||| ||| || || ||||| | | |||||| |||||||| Sbjct 2742 GAATTCCCTCTTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAA 2801 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || ||||| || ||||| || ||||| || |||||||| Sbjct 2802 CCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 2850 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||||||| || || ||||| || || |||||||||| Sbjct 2394 TACCACCACGGAGACGAAGCACCAAATGGAGGGTAGATTCCTTCTGGATGTTGTAATCAG 2453 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| || | || || | ||||| || || || || || | ||||| || | | Sbjct 2454 CCAAAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTG 2513 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| || || || ||||| | | ||| ||| || |||| Sbjct 2514 GGATCCCTTCCTTGTCCTGGATCTTAGCTTTAACATTATCAATAGTGTCTGAGCTCTCAA 2573 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| || || || || | ||| ||||| ||||||||||| Sbjct 2574 CCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAATATCTGCAT 2622 >seq1780 Length=424430 Score = 105 bits (116), Expect = 4e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 |||||||| ||| || || || |||||||| | ||| || | || || | || Sbjct 96798 TGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCATCTTCAAGCTGC 96857 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || |||||||| ||||| | || ||||| | |||| |||||||||||| ||| ||| Sbjct 96858 TTCCCGGCAAAGATTAGCCTCTGCTGATCCGGTGGGATCCCTTCTTTGTCCTGAATCTTT 96917 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||||||||| | | ||||| ||||| ||||| | || || || || |||||| Sbjct 96918 GCCTTCACATTGTCAATGGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCGTC 96977 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 || || || || ||||||||||| Sbjct 96978 AAAGTCTTGACAAATATCTGCAT 97000 Score = 98.7 bits (108), Expect = 7e-16 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| ||| | ||| | ||| ||||| || ||||| || |||||||| | Sbjct 97456 TACCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCTG 97515 Query 38149 ACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204 ||| |||||| || || | ||||| || || || ||||| | |||||||| Sbjct 97516 -CAAG---CGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCC 97571 Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264 | |||| ||||| ||||| || || || || || | | || ||| ||| Sbjct 97572 GGAGGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTC 97631 Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||||| ||||| |||||||| || | || || |||||||||||||| Sbjct 97632 TCGACTTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACGAATATCTGCAT 97684 >seq507 Length=413332 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| ||||| | ||||| || ||||| || || || || |||||||| | Sbjct 378519 TACCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGG 378460 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| ||| | || || | ||||| || ||||| || || | ||| || || | | Sbjct 378459 CCAAAGTACGACCATCCTCAAGCTGTTTCCCAGCAAAGATAAGTCTTTGCTGGTCAGGAG 378400 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| |||||| || ||| ||| ||||| | || || || || |||| Sbjct 378399 GAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAA 378340 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||| || || || || | ||||||||||| || ||||| Sbjct 378339 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 378291 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||||||| | ||||| || ||||| |||||||||||||| | Sbjct 379203 TACCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCCG 379144 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | || | || || | ||||| || || || || || | || || || | | Sbjct 379143 CAAGTGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTG 379084 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| ||| ||| ||| ||||| | || || ||| || |||| Sbjct 379083 GGATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCAA 379024 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | ||||| ||||| || || | ||| ||||| || || ||||| Sbjct 379023 CCTCCAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCAT 378975 >seq400 Length=13612 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||||||||||| || |||||| || || ||||| |||| Sbjct 1817 TACCACCACGAAGACGAAGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAG 1876 Query 38149 ACAAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 ||| | | || | || || | || || |||||||| || || | || || || | Sbjct 1877 -CAAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCCGGA 1935 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 |||| |||||||||||| ||| ||| || || || | | ||| || || ||| Sbjct 1936 GGGATTCCTTCTTTGTCCTGAATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCA 1995 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || ||||| || || || |||| || || || || |||||||| Sbjct 1996 ACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| ||||| | ||||| || || || || || || ||||||||||| | Sbjct 2045 TACCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGG 2104 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || |||| ||||| ||||| || |||| | || || || | | Sbjct 2105 CCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAG 2164 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||| |||||| ||| ||| ||| ||||| | || || || || |||| Sbjct 2165 GAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAA 2224 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || || || | |||||||| || || ||||| Sbjct 2225 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 2273 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||||| ||| | ||||||||| || ||| ||| || || || ||||| |||| Sbjct 1589 TACCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 1648 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| | || |||| || || |||||||| || || | || || || | | Sbjct 1649 CTAGGGTACGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAG 1708 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || ||||| ||| ||| || || ||||| | | || ||| || |||| Sbjct 1709 GGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAA 1768 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || |||||||| || | || || || || || ||||| Sbjct 1769 CCTCGAGGGTGATTGTTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817 >seq788 Length=1574065 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | || ||| |||||||||||||| || |||||| ||||| ||||| |||| Sbjct 100817 TACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAG 100758 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | |||| || | ||| |||||||| || || | | || || || | | Sbjct 100757 CCAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 100698 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||||||| || || || ||||| | || || || || || | Sbjct 100697 GAATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCA 100638 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || ||||| || || ||||| || || ||||| || ||||| Sbjct 100637 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | || ||| |||||||||||||| || |||||| ||||| ||||| |||| Sbjct 108253 TACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAG 108194 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| | |||| || | ||| |||||||| || || | | || || || | | Sbjct 108193 CCAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 108134 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || ||||||||| || || || ||||| | || || || || || | Sbjct 108133 GAATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCYA 108074 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || ||||| || || ||||| || || ||||| || ||||| Sbjct 108073 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | | |||||||||||| ||||| || |||||| || || |||||||| | Sbjct 108481 TACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCG 108422 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || || || ||||||||||| || || | | || || || | | Sbjct 108421 CCAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 108362 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| || ||| || || |||||| || | | ||| ||| ||| || | Sbjct 108361 GGATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCA 108302 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || || | || ||||| || |||||||| Sbjct 108301 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| || | | |||||||||||| ||||| || |||||| || || |||||||| | Sbjct 101045 TACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCG 100986 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| |||| || || || |||||||| || || | | || || || | | Sbjct 100985 CCAAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 100926 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| || ||| || || ||||| || | || || ||| ||| || | Sbjct 100925 GGATACCTTCCTTATCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAACTCTCCA 100866 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || || || | || ||||| || |||||||| Sbjct 100865 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/209 (68%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || || ||| ||||| || ||||||||||||| ||| || | || ||| Sbjct 107777 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTGCGGCCATCTTCT 107718 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 | ||||||||||| || || || | || ||||| | || | |||||| |||||| Sbjct 107717 AGCTGTTTTCCGGCGAAAATAAGCCTYTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGG 107658 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || || | || || || ||||| || || | || ||||| || Sbjct 107657 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 107598 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || || || || |||||||| Sbjct 107597 CCGGTGAGTGTCTTAACAAAGATCTGCAT 107569 >seq912 Length=1276171 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| | ||| | ||||||||| || || ||| ||||| || ||||| |||| Sbjct 751614 TACCACCTCTGAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAG 751555 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 || || | || |||| || || || ||||| || || | || || || | | Sbjct 751554 CCAGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTG 751495 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| || ||||| ||| ||| || || ||||| | | || ||| || |||| Sbjct 751494 GGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAA 751435 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||| || || ||||||||||| | || ||||| || || ||||| Sbjct 751434 CCTCTAGAGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||||||||| || || | |||||||| || || || || || ||||||||||||| Sbjct 751158 TACCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAG 751099 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| ||| | || |||| || || || || || || | | ||| || || | | Sbjct 751098 CCAAGGTACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAG 751039 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||| |||||| || ||| ||| ||||| | || || || ||| |||| Sbjct 751038 GAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAACTCTCAA 750979 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || ||||| || | |||||||| || | ||||| Sbjct 750978 CCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 750930 >seq530 Length=553347 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 ||||| || || ||| ||||| || ||||||||||||| ||| || | || || Sbjct 259966 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTGCGACCATCCTCC 259907 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 || ||||||||||| || || || | || ||||| | || | |||||| |||||| Sbjct 259906 AACTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGG 259847 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288 || || ||| || || | || || || ||||| || || | || ||||| ||| Sbjct 259846 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTA 259787 Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | || || ||||| |||||||| Sbjct 259786 CCGGTGAGAGTCTTAACGAAGATCTGCAT 259758 >seq895 Length=2238827 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | | ||| | |||| |||||| || |||||| || || ||||| || | Sbjct 1033390 ACCACCACGGAGACGGAGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1033449 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | ||| |||| || | ||||| ||||| || || | || || || || | || Sbjct 1033450 GAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGG 1033509 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || ||||| ||||| || || |||||||| | || ||||| |||||| Sbjct 1033510 GATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTATCGGACGATTCAAC 1033569 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322 |||| || || || || ||||| | |||||||||||| |||||||| |||| Sbjct 1033570 CTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTT 1033622 >seq1676 Length=2083552 Score = 82.4 bits (90), Expect = 5e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||||||||| |||| ||||| || ||||| ||| || || || ||||||||| | Sbjct 1910231 CCACCTCTCAACCGCAGAACCAAGTGGAGAGTTGACTCTTTCTGGATGCTGTAATCAGCC 1910172 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || | | | || || | |||| |||||||| || || ||||| || || | || Sbjct 1910171 AAGGTAAGGCCATCCTCGAGCTGTTGACCGGCAAAGATAAGTCGTTGCTGGTCTAAAGGA 1910112 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGA 38250 | ||||||||||||| || || ||| ||||| |||| Sbjct 1910111 ATGCCTTCTTTGTCCTGGATCATTGCCTTGACATTATGGA 1910072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334938060023609