Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1013 129 4e-25
seq713 120 2e-22
seq1891 111 1e-19
seq687 111 1e-19
seq980 107 1e-18
seq1780 105 4e-18
seq507 98.7 7e-16
seq400 96.9 2e-15
seq788 93.3 3e-14
seq912 89.7 3e-13
seq530 89.7 3e-13
seq895 87.8 1e-12
seq1676 82.4 5e-11
>seq1013
Length=1118043
Score = 129 bits (142), Expect = 4e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
||| ||||||| ||| | |||||||||||| || || || || || ||||||||||
Sbjct 384608 ACCTCCTCTCAGACGTAGCACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGC 384667
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| | | |||| || |||||||||||||| || || | ||||| ||||| | ||
Sbjct 384668 GAGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGG 384727
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| ||||| ||||| ||| || |||||||| | || || ||| ||||||
Sbjct 384728 GATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAAC 384787
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||||| || || || || ||||| | |||||||||||| |||||||| ||
Sbjct 384788 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 384838
>seq713
Length=176098
Score = 120 bits (132), Expect = 2e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | ||| | |||||||||||| || ||| |||||||| ||||||||||
Sbjct 45758 TACCACCTCTGAGACGAAGCACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAG 45699
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || |||| || | || || || ||||| || || | || ||||| | |
Sbjct 45698 CGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAG 45639
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| || ||| ||| || || ||||| | | |||||| ||||||||
Sbjct 45638 GGATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAA 45579
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || || ||||| || ||||| || ||||| || ||||||||
Sbjct 45578 CCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 45530
>seq1891
Length=27579
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | ||| | ||||||||| || || ||| || || |||||||||||||
Sbjct 10959 TACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAG 11018
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || |||| || | || || || ||||| || || | || ||||| | |
Sbjct 11019 CGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAG 11078
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| |||||| ||| || || ||||| | | ||||| ||||||||
Sbjct 11079 GAATTCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATCGTATCCGAACTTTCAA 11138
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || ||||| ||||| || ||||| || ||||| || ||||||||
Sbjct 11139 CCTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 11187
>seq687
Length=897029
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | | ||||| ||||| || ||| |||||||||||||||||||
Sbjct 268070 TACCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAG 268011
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| |||| || | |||||| |||||||| || || | || || || | |
Sbjct 268010 CCAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCG 267951
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| ||||| || ||| ||| ||||| | | || || ||||| |
Sbjct 267950 GGATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGCTTTCGA 267891
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || || | || || ||||| ||||||||
Sbjct 267890 CCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 267842
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| || | ||||| || | ||||| || ||||||||| || |||||||| |
Sbjct 268752 CCACCACTAAGACGCAGTACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCA 268693
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || | || || | ||| || || || || || || | ||||| || | |||
Sbjct 268692 AGAGTGCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGG 268633
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||||||||||| ||| || |||||||| | | || ||| || ||||||
Sbjct 268632 ATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACT 268573
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| ||||| |||||||| || | |||||||| |||||||||||
Sbjct 268572 TCTAGAGTAATGGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 268526
Score = 98.7 bits (108), Expect = 7e-16
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | | |||| || ||| | |||||||||||||||||||||||
Sbjct 267842 TACCACCTCTCAACCTAAGGGCCAAGTGGAGAATTGACTCCTTTTGAATATTGTAATCAG 267783
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| | || || | |||||| |||||||| || || ||||| || || |
Sbjct 267782 CCAAAGTACGGCCATCCTCGAGTTGTTTACCGGCAAAGATAAGTCGTTGCTGGTCTAGAG 267723
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||||||||| || | | ||| ||||| | || || | ||||||||
Sbjct 267722 GAATCCCTTCTTTGTCTTGGATCTGTGCCTTGACATTATTGATGGTGTAGGAACTTTCAA 267663
Query 38269 CTTCTAATGTAATAGTTTT 38287
| || | || || |||||
Sbjct 267662 CATCGAGGGTTATGGTTTT 267644
>seq980
Length=1630315
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | ||| | ||||||||| || || ||| || || |||||||||||||
Sbjct 2622 TACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAG 2681
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || |||| || | || || || ||||| || || | || ||||| | |
Sbjct 2682 CGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAG 2741
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||| ||| ||| || || ||||| | | |||||| ||||||||
Sbjct 2742 GAATTCCCTCTTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAA 2801
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || || ||||| || ||||| || ||||| || ||||||||
Sbjct 2802 CCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 2850
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | ||||||||| || || ||||| || || ||||||||||
Sbjct 2394 TACCACCACGGAGACGAAGCACCAAATGGAGGGTAGATTCCTTCTGGATGTTGTAATCAG 2453
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| || | || || | ||||| || || || || || | ||||| || | |
Sbjct 2454 CCAAAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTG 2513
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| |||||| || || || ||||| | | ||| ||| || ||||
Sbjct 2514 GGATCCCTTCCTTGTCCTGGATCTTAGCTTTAACATTATCAATAGTGTCTGAGCTCTCAA 2573
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || ||||| || || || || | ||| ||||| |||||||||||
Sbjct 2574 CCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAATATCTGCAT 2622
>seq1780
Length=424430
Score = 105 bits (116), Expect = 4e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
|||||||| ||| || || || |||||||| | ||| || | || || | ||
Sbjct 96798 TGAAGAGTTGACTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCATCTTCAAGCTGC 96857
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| |||||||| ||||| | || ||||| | |||| |||||||||||| ||| |||
Sbjct 96858 TTCCCGGCAAAGATTAGCCTCTGCTGATCCGGTGGGATCCCTTCTTTGTCCTGAATCTTT 96917
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||||||||| | | ||||| ||||| ||||| | || || || || ||||||
Sbjct 96918 GCCTTCACATTGTCAATGGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCGTC 96977
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
|| || || || |||||||||||
Sbjct 96978 AAAGTCTTGACAAATATCTGCAT 97000
Score = 98.7 bits (108), Expect = 7e-16
Identities = 163/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||||| ||| | ||| | ||| ||||| || ||||| || |||||||| |
Sbjct 97456 TACCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCTG 97515
Query 38149 ACAAAACACGTTCG----TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCG 38204
||| |||||| || || | ||||| || || || ||||| | ||||||||
Sbjct 97516 -CAAG---CGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCC 97571
Query 38205 GAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT 38264
| |||| ||||| ||||| || || || || || | | || ||| |||
Sbjct 97572 GGAGGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTC 97631
Query 38265 TCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||||||| ||||| |||||||| || | || || ||||||||||||||
Sbjct 97632 TCGACTTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACGAATATCTGCAT 97684
>seq507
Length=413332
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| ||||| | ||||| || ||||| || || || || |||||||| |
Sbjct 378519 TACCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGG 378460
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| ||| | || || | ||||| || ||||| || || | ||| || || | |
Sbjct 378459 CCAAAGTACGACCATCCTCAAGCTGTTTCCCAGCAAAGATAAGTCTTTGCTGGTCAGGAG 378400
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| |||||| || ||| ||| ||||| | || || || || ||||
Sbjct 378399 GAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAA 378340
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | ||||| || || || || | ||||||||||| || |||||
Sbjct 378339 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 378291
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||||||||| | ||||| || ||||| |||||||||||||| |
Sbjct 379203 TACCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCCG 379144
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| || | || || | ||||| || || || || || | || || || | |
Sbjct 379143 CAAGTGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGTG 379084
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| |||||| ||| ||| ||| ||||| | || || ||| || ||||
Sbjct 379083 GGATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCAA 379024
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | ||||| ||||| || || | ||| ||||| || || |||||
Sbjct 379023 CCTCCAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCAT 378975
>seq400
Length=13612
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | |||||||||||| || |||||| || || ||||| ||||
Sbjct 1817 TACCACCACGAAGACGAAGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAG 1876
Query 38149 ACAAAACACGTT-CGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
||| | | || | || || | || || |||||||| || || | || || || |
Sbjct 1877 -CAAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCCGGA 1935
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|||| |||||||||||| ||| ||| || || || | | ||| || || |||
Sbjct 1936 GGGATTCCTTCTTTGTCCTGAATCTTTGCTTTGACGTTGTCAATAGTGTCAGAGCTCTCA 1995
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| || ||||| || || || |||| || || || || ||||||||
Sbjct 1996 ACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| ||||| | ||||| || || || || || || ||||||||||| |
Sbjct 2045 TACCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGG 2104
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || |||| ||||| ||||| || |||| | || || || | |
Sbjct 2105 CCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAG 2164
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||| |||||| ||| ||| ||| ||||| | || || || || ||||
Sbjct 2165 GAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAA 2224
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || || || || | |||||||| || || |||||
Sbjct 2225 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 2273
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||||| ||| | ||||||||| || ||| ||| || || || ||||| ||||
Sbjct 1589 TACCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAG 1648
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| ||| | || |||| || || |||||||| || || | || || || | |
Sbjct 1649 CTAGGGTACGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAG 1708
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| || ||||| ||| ||| || || ||||| | | || ||| || ||||
Sbjct 1709 GGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAA 1768
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || |||||||| || | || || || || || |||||
Sbjct 1769 CCTCGAGGGTGATTGTTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817
>seq788
Length=1574065
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | || ||| |||||||||||||| || |||||| ||||| ||||| ||||
Sbjct 100817 TACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAG 100758
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| | |||| || | ||| |||||||| || || | | || || || | |
Sbjct 100757 CCAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 100698
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||||||| || || || ||||| | || || || || || |
Sbjct 100697 GAATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCA 100638
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || ||||| || || ||||| || || ||||| || |||||
Sbjct 100637 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | || ||| |||||||||||||| || |||||| ||||| ||||| ||||
Sbjct 108253 TACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAG 108194
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| | |||| || | ||| |||||||| || || | | || || || | |
Sbjct 108193 CCAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 108134
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || ||||||||| || || || ||||| | || || || || || |
Sbjct 108133 GAATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCYA 108074
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || ||||| || || ||||| || || ||||| || |||||
Sbjct 108073 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | | |||||||||||| ||||| || |||||| || || |||||||| |
Sbjct 108481 TACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCG 108422
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || || || ||||||||||| || || | | || || || | |
Sbjct 108421 CCAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 108362
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| || ||| || || |||||| || | | ||| ||| ||| || |
Sbjct 108361 GGATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCA 108302
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || || || || || || | || ||||| || ||||||||
Sbjct 108301 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| || | | |||||||||||| ||||| || |||||| || || |||||||| |
Sbjct 101045 TACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCG 100986
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| |||| || || || |||||||| || || | | || || || | |
Sbjct 100985 CCAAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 100926
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||| || ||| || || ||||| || | || || ||| ||| || |
Sbjct 100925 GGATACCTTCCTTATCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAACTCTCCA 100866
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || || || || || || | || ||||| || ||||||||
Sbjct 100865 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817
Score = 82.4 bits (90), Expect = 5e-11
Identities = 143/209 (68%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
||||| || || ||| ||||| || ||||||||||||| ||| || | || |||
Sbjct 107777 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTGCGGCCATCTTCT 107718
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
| ||||||||||| || || || | || ||||| | || | |||||| ||||||
Sbjct 107717 AGCTGTTTTCCGGCGAAAATAAGCCTYTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGG 107658
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288
|| || ||| || || | || || || ||||| || || | || ||||| ||
Sbjct 107657 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTT 107598
Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | || || || || ||||||||
Sbjct 107597 CCGGTGAGTGTCTTAACAAAGATCTGCAT 107569
>seq912
Length=1276171
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| | ||| | ||||||||| || || ||| ||||| || ||||| ||||
Sbjct 751614 TACCACCTCTGAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAG 751555
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|| || | || |||| || || || ||||| || || | || || || | |
Sbjct 751554 CCAGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTG 751495
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| || ||||| ||| ||| || || ||||| | | || ||| || ||||
Sbjct 751494 GGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAA 751435
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| |||| || || ||||||||||| | || ||||| || || |||||
Sbjct 751434 CCTCTAGAGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386
Score = 84.2 bits (92), Expect = 1e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| || || | |||||||| || || || || || |||||||||||||
Sbjct 751158 TACCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAG 751099
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || |||| || || || || || || | | ||| || || | |
Sbjct 751098 CCAAGGTACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAG 751039
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | ||||| |||||| || ||| ||| ||||| | || || || ||| ||||
Sbjct 751038 GAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAACTCTCAA 750979
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || | || || || ||||| || | |||||||| || | |||||
Sbjct 750978 CCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 750930
>seq530
Length=553347
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
||||| || || ||| ||||| || ||||||||||||| ||| || | || ||
Sbjct 259966 ACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCCAACGTGCGACCATCCTCC 259907
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
|| ||||||||||| || || || | || ||||| | || | |||||| ||||||
Sbjct 259906 AACTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCCTGG 259847
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288
|| || ||| || || | || || || ||||| || || | || ||||| |||
Sbjct 259846 ATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATAGTCTTA 259787
Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | || || ||||| ||||||||
Sbjct 259786 CCGGTGAGAGTCTTAACGAAGATCTGCAT 259758
>seq895
Length=2238827
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | ||| | |||| |||||| || |||||| || || ||||| || |
Sbjct 1033390 ACCACCACGGAGACGGAGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 1033449
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
| ||| |||| || | ||||| ||||| || || | || || || || | ||
Sbjct 1033450 GAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGG 1033509
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
|| ||||| ||||| || || |||||||| | || ||||| ||||||
Sbjct 1033510 GATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTATCGGACGATTCAAC 1033569
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTTT 38322
|||| || || || || ||||| | |||||||||||| |||||||| ||||
Sbjct 1033570 CTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTTT 1033622
>seq1676
Length=2083552
Score = 82.4 bits (90), Expect = 5e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||||||||| |||| ||||| || ||||| ||| || || || ||||||||| |
Sbjct 1910231 CCACCTCTCAACCGCAGAACCAAGTGGAGAGTTGACTCTTTCTGGATGCTGTAATCAGCC 1910172
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
|| | | | || || | |||| |||||||| || || ||||| || || | ||
Sbjct 1910171 AAGGTAAGGCCATCCTCGAGCTGTTGACCGGCAAAGATAAGTCGTTGCTGGTCTAAAGGA 1910112
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGA 38250
| ||||||||||||| || || ||| ||||| ||||
Sbjct 1910111 ATGCCTTCTTTGTCCTGGATCATTGCCTTGACATTATGGA 1910072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334938060023609
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |