Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq530 113 3e-20 seq980 107 1e-18 seq713 107 1e-18 seq507 104 2e-17 seq788 98.7 7e-16 seq1891 96.9 2e-15 seq400 95.1 9e-15 seq1311 89.7 4e-13 seq687 87.8 1e-12 >seq530 Length=553347 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || ||||| || || || |||||||| ||||| ||| | | Sbjct 260214 ATGCAGATTTTTGTCAAGACATTGACAGGAAAGACCATTACTTTGGAAGTGGAGAGCTCT 260273 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || || ||| || ||||||||| | ||| |||| Sbjct 260274 GACACCATCGACAATGTCAAAGCCAAGATTCAAGACAAAGAGGGTATTCCTCCGGACCAG 260333 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| | ||||| || || || ||||| |||||| | |||| |||| |||||||| Sbjct 260334 CAGAGGTTGATCTTCGCCGGAAAGCAACTTGAAGATGGCAGAACTTTGGCTGATTACAAC 260393 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||| || |||||||| |||| || ||| | || ||||| Sbjct 260394 ATTCAGAAGGAGTCCACTCTTCACTTGGTCTTGCGTCTCCGTGGAGG 260440 >seq980 Length=1630315 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | |||||| | || ||||| |||||||| | || || | | Sbjct 3078 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTCT 3019 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || ||||| ||| ||| ||||| || ||| | ||| | |||| Sbjct 3018 GACACCATTGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGTATTCCTCCAGACCAG 2959 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||| ||||| ||||| ||||||||| || |||| ||||||||| Sbjct 2958 CAGAGATTGATCTTCGCTGGTAAACAGCTAGAAGATGGTCGTACCTTGGCAGATTACAAT 2899 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || || ||| |||| | | ||| |||| || Sbjct 2898 ATCCAGAAGGAATCAACGCTACATTTGGTTCTCAGGTTAAGAGGTGG 2852 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || ||||||||||| |||| || | || Sbjct 2394 ATGCAGATCTTTGTGAAGACCCTTACCGGGAAAACCATTACTCTGGAGGTTGAGAGCTCA 2335 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| || |||||||| | || | ||||| Sbjct 2334 GACACAATCGATAATGTCAAGGCTAAGATTCAGGACAAAGAGGGGATTCCACCAGACCAA 2275 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || ||||| ||||| ||||| || || ||| | ||| |||| |||||||| Sbjct 2274 CAGAGGCTCATCTTCGCTGGGAAACAGCTTGAGGATGGACGGACTTTGGCTGATTACAAC 2215 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||||||||| ||||| | || || ||| | || || || Sbjct 2214 ATCCAGAAGGAATCTACCCTTCACCTTGTGTTGCGTCTTCGTGGTGG 2168 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || || || ||||| || ||||| |||| || | || Sbjct 2166 ATGCAAATCTTTGTGAARACTTTGACAGGCAAGACYATTACBTTGGAGGTTGAGAGCTCA 2107 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||| || ||| || || ||||| | || | ||||| Sbjct 2106 GACACAATCGATAAYGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCAA 2047 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||| ||||| ||||| || || ||| ||| | || |||||||| Sbjct 2046 CAGAGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGGACTTTAGCTGATTACAAC 1987 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || |||||||| || |||||||| |||| | ||| | || || ||| Sbjct 1986 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGA 1939 Score = 86.0 bits (94), Expect = 4e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 ||||||||||||| ||||| ||||| ||||| || || ||| ||| |||| |||| Sbjct 2507 ACCAACAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACTTTGGCTGATT 2448 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||| || |||||||||||||| || ||| |||| | ||| | || || || Sbjct 2447 ACAACATCCAGAAGGAATCTACCCTCCATTTGGTGCTTCGTCTCCGTGGTGG 2396 >seq713 Length=176098 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | |||||| | || ||||| |||||||| | || || | | Sbjct 45302 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTCT 45361 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || ||||| ||| ||| ||||| || ||| | ||| | |||| Sbjct 45362 GACACCATTGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGTATTCCTCCAGACCAG 45421 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||| ||||| ||||| ||||||||| || |||| ||||||||| Sbjct 45422 CAGAGATTGATCTTCGCTGGTAAACAGCTAGAAGATGGTCGTACCTTGGCAGATTACAAT 45481 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || || ||| |||| | | ||| |||| || Sbjct 45482 ATCCAGAAGGAATCAACGCTACATTTGGTTCTCAGGTTAAGAGGTGG 45528 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| || || ||||| |||||||| |||| || | || Sbjct 46214 ATGCAAATCTTTGTGAAAACTTTGACAGGCAAGACCATTACKTTGGAGGTTGAGAGCTCA 46273 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| || || ||||| | || | ||||| Sbjct 46274 GACACAATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCAA 46333 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||| ||||| ||||| || || ||| ||| | || |||||||| Sbjct 46334 CAGAGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGGACTTTAGCTGATTACAAC 46393 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || |||||||| || |||||||| |||| | ||| | || || ||| Sbjct 46394 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGA 46441 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || ||||||||||| |||| || | || Sbjct 45986 ATGCAGATCTTTGTGAAGACCCTTACTGGGAAAACCATTACTCTGGAGGTTGAGAGCTCA 46045 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| || || ||||| | || | ||||| Sbjct 46046 GACACTATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGGATTCCACCAGACCAA 46105 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||| ||||| ||||| || || ||| | ||| |||| |||||||| Sbjct 46106 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGACGGACTTTGGCTGATTACAAC 46165 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||||||||| ||||| | || || ||| | || || || Sbjct 46166 ATCCAGAAGGAATCTACCCTTCACCTTGTGTTGCGTCTTCGTGGTGG 46212 >seq507 Length=413332 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | |||||| | || ||||| |||||||| | || || | | Sbjct 378291 ATGCAAATTTTCGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTCT 378350 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || ||||| ||| || || || || ||| | ||| |||| Sbjct 378351 GACACCATCGACAATGTTAAGGCAAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAG 378410 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||||||||||||||||| ||||| || || ||| ||| ||||||||||||| Sbjct 378411 CAAAGACTTATCTTTGCTGGGAAACAGCTTGAGGATGGTCGTACTTTGGCCGATTACAAC 378470 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| ||||| ||||| || |||| | |||||| |||| || Sbjct 378471 ATCCAGAAAGAATCAACTCTCCACTTGGTTCTTCGTTTAAGAGGTGG 378517 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || | || || ||||||||||| |||| || | || Sbjct 378975 ATGCAAATCTTTGTGAAGACCCTTACCGGAAAAACCATTACTCTGGAGGTTGAGAGCTCA 379034 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| ||| ||| || || || || | || | |||| Sbjct 379035 GACACAATCGATAATGTCAAGGCAAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAG 379094 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||| ||||| ||||| || || ||| || | || ||||||||| Sbjct 379095 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGGACACTTGCGGATTACAAT 379154 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||||||||||| || ||||| | || || ||| | || || || Sbjct 379155 ATTCAGAAGGAATCAACCCTTCACCTTGTGTTGCGTCTTCGTGGTGG 379201 >seq788 Length=1574065 Score = 98.7 bits (108), Expect = 7e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || ||||||||| | ||| |||| ||||| | ||||| || || || ||||| ||| Sbjct 100682 GACAAAGAGGGTATTCCTCCGGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAACTTGAA 100741 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 || | |||| |||| || ||||| ||||||||||| ||||| |||||| |||| ||| Sbjct 100742 GACGGCAGAACTTTGGCTGACTACAACATTCAGAAGGAGTCTACCCTTCATTTGGTGTTA 100801 Query 22047 CGTTTACGAGGAGG 22060 ||| | || ||||| Sbjct 100802 CGTCTGCGTGGAGG 100815 Score = 98.7 bits (108), Expect = 7e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || ||||||||| | ||| |||| ||||| | ||||| || || || ||||| ||| Sbjct 108118 GACAAAGAGGGTATTCCTCCGGACCAGCAGAGGTTGATCTTCGCCGGAAAGCAACTTGAA 108177 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 || | |||| |||| || ||||| ||||||||||| ||||| |||||| |||| ||| Sbjct 108178 GACGGCAGAACTTTGGCTGACTACAACATTCAGAAGGAGTCTACCCTTCATTTGGTGTTA 108237 Query 22047 CGTTTACGAGGAGG 22060 ||| | || ||||| Sbjct 108238 CGTCTGCGTGGAGG 108251 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || ||||||||| | || |||| |||||| | ||||| || || || ||||| ||| Sbjct 693213 GACAAAGAGGGTATCCCACCGGACCAGCAGAGATTGATCTTCGCCGGAAAGCAACTTGAA 693272 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| | |||| |||| || ||||| ||||||||||| ||||| ||||| |||| || Sbjct 693273 GATGGCAGAACTTTGGCTGACTACAACATTCAGAAGGAGTCTACACTTCACTTGGTCTTG 693332 Query 22047 CGTTTACGAGGAGG 22060 ||| | || ||||| Sbjct 693333 CGTCTGCGTGGAGG 693346 >seq1891 Length=27579 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| || || ||||| |||||||| |||| || | || Sbjct 10503 ATGCAAATCTTTGTGAAAACTTTGACAGGCAAGACCATTACGTTGGAGGTTGAGAGCTCA 10444 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| || || ||||| | || | ||||| Sbjct 10443 GACACAATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCAA 10384 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||| ||||| ||||| || || ||| ||| | || |||||||| Sbjct 10383 CAGAGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGGACTTTAGCTGATTACAAC 10324 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || |||||||| || |||||||| |||| | ||| | || || ||| Sbjct 10323 ATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGGA 10276 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || | || || ||||||||||| |||| || | || Sbjct 10731 ATGCAGATCTTTGTGAAGACCCTTACCGGGAAAACCATTACTCTGGAGGTTGAGAGCTCA 10672 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | | ||| || ||| || |||||||| | || | ||||| Sbjct 10671 GACACAATCGATAAYGTCAAGGCTAAGATTCAGGACAAAGAGGGGATTCCACCAGACCAA 10612 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || ||||| ||||| ||||| || || ||| | ||| |||| |||||||| Sbjct 10611 CAGAGGCTCATCTTCGCTGGGAAACAGCTTGARGATGGACGGACTTTGGCTGATTACAAC 10552 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || |||||||||||||| ||||| | || || ||| | || || || Sbjct 10551 ATCCAGAAGGAATCTACCCTTCACCTTGTGTTGCGTCTTCGTGGTGG 10505 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | |||||| | || ||||| |||||||| | || || | | Sbjct 11643 ATGCAAATTTTCGTGAAAACACTTACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTCT 11584 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | ||| ||| ||| ||||| || ||| | ||| |||| Sbjct 11583 GACACCATTGACAATGTCAAGGCAAAGATTCAGGATAAGGAAGGTATTCCTCCGGACCAG 11524 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||| || || ||||| || || ||| || |||||||||||||| Sbjct 11523 CAGAGATTGATCTTCGCCGGTAAACAGCTGGAGGATGGTCGTACCTTGGCCGATTACAAT 11464 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||||||||| || || ||| |||| | | ||| |||| || Sbjct 11463 ATCCAGAAGGAATCAACACTCCATTTGGTTCTCAGGTTAAGAGGTGG 11417 >seq400 Length=13612 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | |||||| | || ||||| ||||| || | || || | | Sbjct 2273 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCT 2214 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || ||||| ||| ||| || || || || | ||| |||| Sbjct 2213 GACACCATCGACAATGTTAAGGCAAAGATTCAGGACAAGGAAGGCATTCCTCCGGACCAG 2154 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||| | ||||| || || ||||| ||||||||| || |||||||||||||| Sbjct 2153 CAGAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGCCGTACCTTGGCCGATTACAAT 2094 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| ||||| || || || |||| | |||||| |||| || Sbjct 2093 ATCCAGAAAGAATCAACCCTCCACTTGGTTCTCCGTTTAAGAGGTGG 2047 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 ||||||||||||| ||||| ||||| ||||| || || ||| ||| |||| |||| Sbjct 1474 ACCAACAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTTTGGCTGATT 1415 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||| || |||||||||||||||||||| | || || ||| | || || || Sbjct 1414 ACAACATCCAGAAGGAATCTACTCTTCACCTTGTGTTGCGTCTGCGTGGTGG 1363 >seq1311 Length=673479 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | || || |||| ||||| ||||| || |||| ||| | || Sbjct 79833 ATGCAGATCTTTGTGAAGACCCTAACCGGCAAGACCATAACTTTGGAGGTGGAGAGCTCA 79892 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || ||| || || || || | || | ||||| Sbjct 79893 GACACAATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAA 79952 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||| ||||| ||||| ||||| || || ||| ||| | || |||||||| Sbjct 79953 CAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTTTAGCTGATTACAAC 80012 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||||||||||||||||| ||||| | || || ||| | || || || Sbjct 80013 ATTCAGAAGGAATCTACCCTTCACCTTGTGTTGCGTCTGCGTGGTGG 80059 >seq687 Length=897029 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| |||||| | ||||| | || || ||||||||||| | ||| || | || Sbjct 268526 ATGCAGATATTTGTGAAAACTCTTACCGGTAAAACCATTACTCTAGAAGTTGAGAGCTCA 268585 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || | || || ||| || ||||| || | ||| ||||| Sbjct 268586 GACACCATTGACAATGTGAAAGCTAAGATTCAAGACAAAGAAGGAATCCCTCCGGACCAA 268645 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||||||||| |||||||| ||||| || ||| ||| | || |||||||| Sbjct 268646 CAGAGACTTATCTTCGCTGGCAAGCAACTTGAGGATGGTCGCACTCTTGCGGATTACAAC 268705 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGT 22049 || || ||||| || || ||||| | ||| | ||| Sbjct 268706 ATCCAAAAGGAGTCAACACTTCACCTTGTACTGCGT 268741 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 ||||| || ||| | ||||| | | ||||||||||| || |||| || | || Sbjct 268298 ATGCAGATCTTTGTGAAAACCCTCATTGGCAAAACCATAACTTTGGAGGTTGAGAGCTCA 268357 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || |||| || ||| ||||| || || | ||| |||| Sbjct 268358 GACACAATTGACAATGTTAAAGCTAAGATTCAAGATAAGGAAGGGATCCCTCCGGACCAG 268417 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 |||||||||||||| |||||||| ||||| || ||| || | || |||||||| Sbjct 268418 CAGAGACTTATCTTCGCTGGCAAGCAACTTGAGGATGGTCGCACCCTTGCAGATTACAAC 268477 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 || ||||| ||||| ||||| ||| |||| Sbjct 268478 ATCCAGAAAGAATCAACTCTCCATTTGGT 268506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358115027557606