Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq788 127 2e-24
seq400 114 1e-20
seq687 111 2e-19
seq1311 107 2e-18
seq1891 98.7 1e-15
seq530 98.7 1e-15
seq912 96.9 3e-15
seq895 93.3 4e-14
seq713 86.0 6e-12
seq1780 84.2 2e-11
>seq788
Length=1574065
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445
|||| || || | ||| | || || || | | | |||||||| || ||||||||||||
Sbjct 694032 AGCCACCACGGAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 693973
Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505
|| |||||| |||||||| || || || | |||| |||||||| ||||||||||
Sbjct 693972 CCAAAGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 693913
Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
| |||||||| || || ||| || |||| | || | |||||||| |||||
Sbjct 693912 GGATACCTTCCTTATCCTGGATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTCTCCA 693853
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||| | || | || || || |||||||| || || ||||||||||||
Sbjct 693852 CCTCCAGTGTGATAGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATG 693803
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| || || ||||| | | | |||||||| |||||||||||||| |
Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || ||||| || |||| |||| | | ||| |||||||||||
Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| |||||||| ||| || ||| | |||| || | |||||| | ||||||
Sbjct 100695 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTG-TCGATGGTGTCAGAGCTCTCCAC 100637
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || ||||||| || || || || || |||||
Sbjct 100636 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589
Score = 104 bits (114), Expect = 2e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||| || || ||||| | | | |||||||| |||||||||||||| |
Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||| || ||||| || |||| |||| | | ||| |||||||||||
Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| |||||||| ||| || ||| | |||| || | |||||| | ||| ||
Sbjct 108131 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTG-TCGATGGTGTCAGAGCTCTCYAC 108073
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || ||||||| || || || || || |||||
Sbjct 108072 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || |||||| ||||| || || || || |
Sbjct 101238 GACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCCTCAAGCTGCTTTCCAGCG 101179
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||||||||| |||||||| ||||| ||| || || |
Sbjct 101178 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACG 101119
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||||| |||||| || | || | || || || |||| ||| ||
Sbjct 101118 TTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 101059
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 101058 ACGAAAATCTGCAT 101045
Score = 102 bits (112), Expect = 8e-17
Identities = 139/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || ||||||| ||||| || ||||| || |
Sbjct 108674 GACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGCCCATCCTCAAGCTGTTTTCCAGCG 108615
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||||||||| || ||||| ||||| ||| || || |
Sbjct 108614 AAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 108555
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | ||| || || | || | ||| || ||||||| ||| ||
Sbjct 108554 TTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTG 108495
Query 138601 ACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 108494 ACGAAGATCTGCAT 108481
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| |||||| || || || | | |||||||| |||||||||||||| |
Sbjct 693346 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 693287
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | || || ||||| || |||| |||| | | ||| |||||||| ||
Sbjct 693286 AAAGTTCTGCCA-TCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGG 693228
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| |||||||| ||| || || | | || | |||||| | ||||||
Sbjct 693227 GATACCCTCTTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCAC 693168
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || ||||||| ||| || || |||||||||||
Sbjct 693167 CTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120
Score = 100 bits (110), Expect = 3e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||||||||| || |||||||| || || || ||||| || ||||| || |
Sbjct 108902 GACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTCAAGCTGTTTTCCAGCG 108843
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||||||||| |||||||| ||||| ||| || || |
Sbjct 108842 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACG 108783
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | ||| ||||||| || | || || || |||||||| ||
Sbjct 108782 TTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTTCCCGGTCAGAGTCTTC 108723
Query 138601 ACAAAAATCTGCAT 138614
|| ||| |||||||
Sbjct 108722 ACGAAARTCTGCAT 108709
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| || || || | | | |||||||| || |||||||| || |
Sbjct 101043 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 100984
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| |||||| | || || |||| |||| | | ||| |||||||||||
Sbjct 100983 AAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 100924
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| || || ||| || ||| | | || | |||||| | |||||||
Sbjct 100923 ATACCTTCCTTATCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAACTCTCCACC 100864
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || || || ||||| || ||||||||||||||
Sbjct 100863 TCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479
|||||||| || ||||||||||| ||| | || || ||||| || ||||| || |
Sbjct 693769 GACTCCTTCTGGATGTTGTAGTCAGCTAAG-GTGCGGCCATCCTCAAGCTGTTTTCCAGC 693711
Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538
|||| |||||||| ||||||||||| || ||||| ||||| ||| || || |
Sbjct 693710 GAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC 693651
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
|||| || | |||||| | |||||| || | || | || ||||| |||| ||| |
Sbjct 693650 ATTG-TCAATGGTGTCTGAGCTCTCCACTTCAAGGGTGATGGTCTTACCGGTCAAAGTCT 693592
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| ||||||||
Sbjct 693591 TGACAAAGATCTGCAT 693576
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| || || || | | | |||||||| || |||||||| || |
Sbjct 108479 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 108420
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||||| | ||||| |||| |||| | | ||| |||||||||||
Sbjct 108419 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 108360
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|||||||| || || ||| || || | | || | ||||| | |||||||
Sbjct 108359 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACC 108300
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || || || ||||| || ||||||||||||||
Sbjct 108299 TCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253
>seq400
Length=13612
Score = 114 bits (126), Expect = 1e-20
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446
|| |||| || ||| | || ||||| | | | ||||| || || ||||||||||| |||
Sbjct 1591 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCT 1650
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||||| ||||| || || ||||||| | |||| || | ||| |||||||||||
Sbjct 1651 -AGGGTACGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGG 1709
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564
|| || ||||| || ||| | || | ||| |||| || | |||||| | |||
Sbjct 1710 GATTCCCTCTTTATC-CTGAATCTTAGCTTTGACATTG-TCAATGGTGTCTGAGCTCTCA 1767
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||||| || | ||||||||||| ||||| || ||||| || |||||
Sbjct 1768 ACCTCGAGGGTGATTGTTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817
Score = 105 bits (116), Expect = 7e-18
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||||| | ||| || || | | |||| || || || || ||||| ||| |
Sbjct 2047 CCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 2106
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || || |||||||||| |||||| | ||| |||||||||||
Sbjct 2107 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 2166
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| ||||| ||||| ||| | |||| ||| |||| || | |||||| | ||| |
Sbjct 2167 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTG-TCGATGGTGTCAGAGCTCTCAA 2224
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| || | || || ||||| || ||||| ||||| || |||||
Sbjct 2225 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 2273
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||| | | |||||||| || |||||||||||
Sbjct 1819 CCACCACGAAGACGAAGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCA 1878
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | ||||| || || || |||| | |||| || | ||| |||||||||||
Sbjct 1879 AGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 1938
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| ||||||||||| ||| | |||| ||| | ||| || | ||||| | ||| |
Sbjct 1939 ATTCCTTCTTTGTC-CTGAATCTTTGCTTTGACGTTG-TCAATAGTGTCAGAGCTCTCAA 1996
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || || ||||||||||| || ||||| ||||||||
Sbjct 1997 CTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045
>seq687
Length=897029
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | | ||| || || | | ||||||| |||||||| ||||| || |
Sbjct 268068 CCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAGCC 268009
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| |||||| ||||||||||||| | |||| || | ||| |||||||| ||
Sbjct 268008 AAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCGGG 267949
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| ||| || | |||| || | ||||| | || ||
Sbjct 267948 ATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTG-TCAATTGTGTCAGAGCTTTCGAC 267890
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || ||||| ||||| || || || ||||||||
Sbjct 267889 CTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 267842
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || || | ||| | || | ||| | | |||||||||| || |||||||| ||
Sbjct 268297 GCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 268238
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| |||||| |||||||| || ||||||| | |||| || | |||||||||||||||
Sbjct 268237 AAGAGTACGGCCATCCTCGAGCTGCTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGG 268178
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||| ||||| ||||| ||| || || | | || | ||| || | || ||
Sbjct 268177 TATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGAC 268118
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | |||||| || || ||||| || ||||| ||||||||
Sbjct 268117 CTCAAGGGTTATCGTTTTCCCTGTAAGAGTCTTGACAAAGATCTGCAT 268070
Score = 109 bits (120), Expect = 5e-19
Identities = 145/198 (73%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
||||||||||||| |||||||| || | ||| || ||||| ||||| || || |
Sbjct 268721 TTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCAAGTTGCTTGCCAG 268662
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT- 138537
|||| || | ||||||||||||||| || ||||||||||| ||| | || | |||
Sbjct 268661 CGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTC-TTGAATCTTAGCTTTC 268603
Query 138538 -AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596
|||| || | |||||| | ||| || || | || | |||||||| || |||||
Sbjct 268602 ACATTG-TCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTACCGGTAAGAGT 268544
Query 138597 TTTTACAAAAATCTGCAT 138614
||| ||||| ||||||||
Sbjct 268543 TTTCACAAATATCTGCAT 268526
Score = 96.9 bits (106), Expect = 3e-15
Identities = 83/103 (81%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478
|||||||||||||||| ||||| || || |||||| |||||||||||||||||||
Sbjct 267809 TTGACTCCTTTTGAATATTGTAATCAGCCAAAGTACGGCCATCCTCGAGTTGTTTACCGG 267750
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521
| |||| || || || ||||| |||| || |||||||||||
Sbjct 267749 CAAAGATAAGTCGTTGCTGGTCTAGAGGAATCCCTTCTTTGTC 267707
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479
||||| || ||||| ||||| || ||| | ||| || |||||||| ||||| ||||
Sbjct 268947 GACTCTTTCTGAATATTGTAATCTGCTAA-AGTGCGACCATCCTCGAGCTGTTTTCCGGC 268889
Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGT-TTTA 138538
| ||||||| | ||| ||||||||| ||| ||||| ||||| ||| | || | ||||
Sbjct 268888 AAAGATTAGCCTCTGCTGGTCCGGAACTATCCCTTCCTTGTCC-TGAATCTTGGCCTTTA 268830
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
| ||| | || || | ||| ||||||| || | || || || |||| ||| |
Sbjct 268829 CGTTTTCAATCGTATCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCCGTCAAAGTCT 268770
Query 138599 TTACAAAAATCTGCAT 138614
| ||||||||||||||
Sbjct 268769 TGACAAAAATCTGCAT 268754
>seq1311
Length=673479
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| | ||| | || ||||| | | ||||| || || |||||||||||
Sbjct 79831 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCA 79772
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | |||||| || || ||||||| | |||| || | |||||||||||||||
Sbjct 79771 AGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGA 79712
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||| ||||| ||| || ||| | | || | |||||| | ||| |||
Sbjct 79711 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCAACC 79652
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | ||||||||||| || || || ||||| ||||||||
Sbjct 79651 TCGAGGGTAATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 79605
Score = 105 bits (116), Expect = 7e-18
Identities = 143/196 (73%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | ||| | ||||| || || ||||||| |
Sbjct 79570 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCA 79511
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| || | ||| ||||||||||| || ||||||||||| ||| | |||| |||||
Sbjct 79510 AAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTC-CTGAATCTTTGCTTTAAC 79452
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | ||| || || | || | || || ||||||||||| |
Sbjct 79451 GTTG-TCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCT 79393
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| ||||||||
Sbjct 79392 TGACAAAGATCTGCAT 79377
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446
|| || |||| |||||| || | || | | | || ||||| ||||||||||| || |||
Sbjct 80059 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 80000
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| || ||||| || |||||||| | |||| || | ||||||||| || ||
Sbjct 79999 -AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 79941
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| ||||| ||||| ||| | || | || | | || | ||||| | |||||
Sbjct 79940 GATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCCA 79882
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | || || || || || || || ||||| ||||||||
Sbjct 79881 CCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 79833
>seq1891
Length=27579
Score = 98.7 bits (108), Expect = 1e-15
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464
||| ||||| | |||| ||||| || || ||||| ||| || ||||| |||||
Sbjct 11434 AACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTACGACCATCCTC 11493
Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524
|| |||||||||| |||| | | ||| ||||||||||| |||||||| || || |
Sbjct 11494 CAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCTTCCTTATC-CT 11552
Query 138525 GATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582
|| | |||| || |||| || | |||||| | ||| ||||||| || | ||
Sbjct 11553 GAATCTTTGCCTTGACATTG-TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTC 11611
Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| ||||| || ||||| || ||||| |||||
Sbjct 11612 TTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 11643
>seq530
Length=553347
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || ||| || ||||| || || || || |
Sbjct 260635 GACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCG 260576
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||||||||| |||||||| ||||| ||| || || |
Sbjct 260575 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACG 260516
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | ||| ||||| | || | || || ||||| ||||| ||
Sbjct 260515 TTGTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATAGTCTTTCCAGTGAGAGTCTTC 260456
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 260455 ACAAAGATCTGCAT 260442
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| || || || | | |||||||| ||||||||||| || |
Sbjct 260440 CCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCC 260381
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | || || ||||| || |||| |||| | | ||| |||||||||||
Sbjct 260380 AAAGTTCTGCCA-TCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 260322
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
||||| |||||||| ||| | || | ||| | |||| | | |||||| | ||||
Sbjct 260321 AATACCCTCTTTGTCT-TGAATCTTGGCTTTGACATTGT-CGATGGTGTCAGAGCTCTCC 260264
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || | || | || || || |||| || || ||||||||||||||
Sbjct 260263 ACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214
>seq912
Length=1276171
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| | ||| | || ||||| | | ||||||| ||||| ||||||||||| |
Sbjct 751612 CCACCTCTGAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCC 751553
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || ||||| | | |||| || | ||| |||||||| ||
Sbjct 751552 AGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 751493
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || ||||| || ||| | || | ||| |||| || | |||||| | ||| |
Sbjct 751492 ATTCCCTCTTTATC-CTGAATCTTAGCTTTGACATTG-TCAATGGTGTCTGAGCTCTCAA 751435
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| | || | |||||||| || ||||| || ||||| || |||||
Sbjct 751434 CCTCTAGAGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | ||| | |||||| || || ||||| |
Sbjct 751351 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCCTCAAGCTGCTTACCAGCG 751292
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
| || || | ||| ||||||||||| || ||||| ||||| ||| | |||| || |
Sbjct 751291 AAAATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTC-CTGAATCTTTGCCTTGAC 751233
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | || ||||| | || | ||||| ||||||||||| |
Sbjct 751232 GTTG-TCAATAGTGTCAGAACTTTCAACCTCAAGGGTGATGGTTTTGCCAGTCAGAGTCT 751174
Query 138599 TTACAAAAATCTGCAT 138614
| ||||| ||||||||
Sbjct 751173 TGACAAAGATCTGCAT 751158
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || || | ||| ||||| | |||| || || || || ||||| || |
Sbjct 751156 CCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCC 751097
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || || || ||||| | |||| | | || |||||||||||
Sbjct 751096 AAGGTACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGA 751037
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| ||||| ||| ||| || | |||| || | |||||| | ||| ||
Sbjct 751036 ATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTG-TCGATGGTGTCAGAACTCTCAAC 750978
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | || |||||||| || ||||| ||||||| |||||
Sbjct 750977 CTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 750930
>seq895
Length=2238827
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||||| ||| || || ||||| ||||
Sbjct 1033424 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCG 1033483
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || | ||||| |||||||| || || ||||| ||||| ||| || ||| | |
Sbjct 1033484 AAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTCACA 1033543
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||| |||| ||| || ||||| | || | || || || || || |||||
Sbjct 1033544 TTG-TCGATGGTATCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 1033602
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 1033603 CACGAAGATCTGCAT 1033617
>seq713
Length=176098
Score = 86.0 bits (94), Expect = 6e-12
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446
|| |||| | ||| | || ||||| | | | ||||| |||||||||||||| || ||
Sbjct 45756 CCACCTCTGAGACGAAGCACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAGC- 45698
Query 138447 CATAGTACGCGA--GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504
||| |||| |||||| || || ||||| | | |||| || | ||| || ||||||
Sbjct 45697 --GAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 45640
Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTC 138563
|| || ||||| || || ||| | || | ||||| | || | || || | ||
Sbjct 45639 GGGATTCCTTCCTTATC-CTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTC 45581
Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | ||||| ||||||| || || ||||||||||||||
Sbjct 45580 AACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 45530
>seq1780
Length=424430
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470
||| | | |||||||||| || |||||||| || | ||| || || ||||||||
Sbjct 97253 ATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCGACCATCTTCGAGTTG 97312
Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530
|| || | | |||| || | ||||||||| || || || ||||||||||| ||| | |
Sbjct 97313 CTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTTGTC-CTGAATCT 97371
Query 138531 TTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAG 138589
| | || | | || | ||||| | ||| || || | || | ||| || || |
Sbjct 97372 TGGACTTCAGGTTATCGATTGTGTCCGAGCTCTCAACTTCCAAAGTTATCGTCTTTCCGG 97431
Query 138590 TCAGAGTTTTTACAAAAATCTGCAT 138614
| ||||| || ||||||||||||||
Sbjct 97432 TAAGAGTCTTGACAAAAATCTGCAT 97456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496248510856080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |