Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq788 127 2e-24 seq400 114 1e-20 seq687 111 2e-19 seq1311 107 2e-18 seq1891 98.7 1e-15 seq530 98.7 1e-15 seq912 96.9 3e-15 seq895 93.3 4e-14 seq713 86.0 6e-12 seq1780 84.2 2e-11 >seq788 Length=1574065 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | ||| | || || || | | | |||||||| || |||||||||||| Sbjct 694032 AGCCACCACGGAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 693973 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 || |||||| |||||||| || || || | |||| |||||||| |||||||||| Sbjct 693972 CCAAAGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 693913 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | |||||||| || || ||| || |||| | || | |||||||| ||||| Sbjct 693912 GGATACCTTCCTTATCCTGGATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTCTCCA 693853 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | || || || |||||||| || || |||||||||||| Sbjct 693852 CCTCCAGTGTGATAGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATG 693803 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| || || ||||| | | | |||||||| |||||||||||||| | Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| || |||| |||| | | ||| ||||||||||| Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| || ||| | |||| || | |||||| | |||||| Sbjct 100695 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTG-TCGATGGTGTCAGAGCTCTCCAC 100637 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||||| || || || || || ||||| Sbjct 100636 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589 Score = 104 bits (114), Expect = 2e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| || || ||||| | | | |||||||| |||||||||||||| | Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| || |||| |||| | | ||| ||||||||||| Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| || ||| | |||| || | |||||| | ||| || Sbjct 108131 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTG-TCGATGGTGTCAGAGCTCTCYAC 108073 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||||| || || || || || ||||| Sbjct 108072 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || |||||| ||||| || || || || | Sbjct 101238 GACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCCTCAAGCTGCTTTCCAGCG 101179 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| |||||||| ||||| ||| || || | Sbjct 101178 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACG 101119 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| |||||| || | || | || || || |||| ||| || Sbjct 101118 TTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTC 101059 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 101058 ACGAAAATCTGCAT 101045 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||||||| ||||| || ||||| || | Sbjct 108674 GACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGCCCATCCTCAAGCTGTTTTCCAGCG 108615 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 108614 AAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 108555 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| || || | || | ||| || ||||||| ||| || Sbjct 108554 TTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTG 108495 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 108494 ACGAAGATCTGCAT 108481 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | |||||||| |||||||||||||| | Sbjct 693346 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 693287 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || ||||| || |||| |||| | | ||| |||||||| || Sbjct 693286 AAAGTTCTGCCA-TCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGG 693228 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| || || | | || | |||||| | |||||| Sbjct 693227 GATACCCTCTTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCAC 693168 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||||| ||| || || ||||||||||| Sbjct 693167 CTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120 Score = 100 bits (110), Expect = 3e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| || |||||||| || || || ||||| || ||||| || | Sbjct 108902 GACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTCAAGCTGTTTTCCAGCG 108843 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| |||||||| ||||| ||| || || | Sbjct 108842 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACG 108783 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||||| || | || || || |||||||| || Sbjct 108782 TTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTTCCCGGTCAGAGTCTTC 108723 Query 138601 ACAAAAATCTGCAT 138614 || ||| ||||||| Sbjct 108722 ACGAAARTCTGCAT 108709 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | | |||||||| || |||||||| || | Sbjct 101043 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 100984 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| | || || |||| |||| | | ||| ||||||||||| Sbjct 100983 AAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 100924 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| || ||| | | || | |||||| | ||||||| Sbjct 100923 ATACCTTCCTTATCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAACTCTCCACC 100864 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| || |||||||||||||| Sbjct 100863 TCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| ||| | || || ||||| || ||||| || | Sbjct 693769 GACTCCTTCTGGATGTTGTAGTCAGCTAAG-GTGCGGCCATCCTCAAGCTGTTTTCCAGC 693711 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 |||| |||||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 693710 GAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC 693651 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||| | |||||| || | || | || ||||| |||| ||| | Sbjct 693650 ATTG-TCAATGGTGTCTGAGCTCTCCACTTCAAGGGTGATGGTCTTACCGGTCAAAGTCT 693592 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 693591 TGACAAAGATCTGCAT 693576 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | | |||||||| || |||||||| || | Sbjct 108479 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 108420 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| | ||||| |||| |||| | | ||| ||||||||||| Sbjct 108419 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 108360 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| || || | | || | ||||| | ||||||| Sbjct 108359 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACC 108300 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| || |||||||||||||| Sbjct 108299 TCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253 >seq400 Length=13612 Score = 114 bits (126), Expect = 1e-20 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || |||| || ||| | || ||||| | | | ||||| || || ||||||||||| ||| Sbjct 1591 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCT 1650 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||||| || || ||||||| | |||| || | ||| ||||||||||| Sbjct 1651 -AGGGTACGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGG 1709 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 || || ||||| || ||| | || | ||| |||| || | |||||| | ||| Sbjct 1710 GATTCCCTCTTTATC-CTGAATCTTAGCTTTGACATTG-TCAATGGTGTCTGAGCTCTCA 1767 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | ||||||||||| ||||| || ||||| || ||||| Sbjct 1768 ACCTCGAGGGTGATTGTTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | ||| || || | | |||| || || || || ||||| ||| | Sbjct 2047 CCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 2106 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || |||||||||| |||||| | ||| ||||||||||| Sbjct 2107 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 2166 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | |||| ||| |||| || | |||||| | ||| | Sbjct 2167 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTG-TCGATGGTGTCAGAGCTCTCAA 2224 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || ||||| ||||| || ||||| Sbjct 2225 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 2273 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | | |||||||| || ||||||||||| Sbjct 1819 CCACCACGAAGACGAAGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCA 1878 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||||| || || || |||| | |||| || | ||| ||||||||||| Sbjct 1879 AGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 1938 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| | |||| ||| | ||| || | ||||| | ||| | Sbjct 1939 ATTCCTTCTTTGTC-CTGAATCTTTGCTTTGACGTTG-TCAATAGTGTCAGAGCTCTCAA 1996 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | || || ||||||||||| || ||||| |||||||| Sbjct 1997 CTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045 >seq687 Length=897029 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | ||| || || | | ||||||| |||||||| ||||| || | Sbjct 268068 CCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAGCC 268009 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| |||||| ||||||||||||| | |||| || | ||| |||||||| || Sbjct 268008 AAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCGGG 267949 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| ||| || | |||| || | ||||| | || || Sbjct 267948 ATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTG-TCAATTGTGTCAGAGCTTTCGAC 267890 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||| ||||| || || || |||||||| Sbjct 267889 CTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 267842 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || | ||| | | |||||||||| || |||||||| || Sbjct 268297 GCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 268238 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| |||||||| || ||||||| | |||| || | ||||||||||||||| Sbjct 268237 AAGAGTACGGCCATCCTCGAGCTGCTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGG 268178 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||| ||||| ||||| ||| || || | | || | ||| || | || || Sbjct 268177 TATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGAC 268118 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | |||||| || || ||||| || ||||| |||||||| Sbjct 268117 CTCAAGGGTTATCGTTTTCCCTGTAAGAGTCTTGACAAAGATCTGCAT 268070 Score = 109 bits (120), Expect = 5e-19 Identities = 145/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||||||||| |||||||| || | ||| || ||||| ||||| || || | Sbjct 268721 TTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCAAGTTGCTTGCCAG 268662 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT- 138537 |||| || | ||||||||||||||| || ||||||||||| ||| | || | ||| Sbjct 268661 CGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTC-TTGAATCTTAGCTTTC 268603 Query 138538 -AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 |||| || | |||||| | ||| || || | || | |||||||| || ||||| Sbjct 268602 ACATTG-TCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTACCGGTAAGAGT 268544 Query 138597 TTTTACAAAAATCTGCAT 138614 ||| ||||| |||||||| Sbjct 268543 TTTCACAAATATCTGCAT 268526 Score = 96.9 bits (106), Expect = 3e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||||||||| ||||| || || |||||| ||||||||||||||||||| Sbjct 267809 TTGACTCCTTTTGAATATTGTAATCAGCCAAAGTACGGCCATCCTCGAGTTGTTTACCGG 267750 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 | |||| || || || ||||| |||| || ||||||||||| Sbjct 267749 CAAAGATAAGTCGTTGCTGGTCTAGAGGAATCCCTTCTTTGTC 267707 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 ||||| || ||||| ||||| || ||| | ||| || |||||||| ||||| |||| Sbjct 268947 GACTCTTTCTGAATATTGTAATCTGCTAA-AGTGCGACCATCCTCGAGCTGTTTTCCGGC 268889 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGT-TTTA 138538 | ||||||| | ||| ||||||||| ||| ||||| ||||| ||| | || | |||| Sbjct 268888 AAAGATTAGCCTCTGCTGGTCCGGAACTATCCCTTCCTTGTCC-TGAATCTTGGCCTTTA 268830 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | ||| | || || | ||| ||||||| || | || || || |||| ||| | Sbjct 268829 CGTTTTCAATCGTATCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCCGTCAAAGTCT 268770 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||||||||| Sbjct 268769 TGACAAAAATCTGCAT 268754 >seq1311 Length=673479 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | || ||||| | | ||||| || || ||||||||||| Sbjct 79831 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCA 79772 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||| || || ||||||| | |||| || | ||||||||||||||| Sbjct 79771 AGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGA 79712 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | |||||| | ||| ||| Sbjct 79711 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCAACC 79652 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||||||||| || || || ||||| |||||||| Sbjct 79651 TCGAGGGTAATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 79605 Score = 105 bits (116), Expect = 7e-18 Identities = 143/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| | ||||| || || ||||||| | Sbjct 79570 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCA 79511 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| ||||||||||| || ||||||||||| ||| | |||| ||||| Sbjct 79510 AAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTC-CTGAATCTTTGCTTTAAC 79452 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | ||| || || | || | || || ||||||||||| | Sbjct 79451 GTTG-TCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCT 79393 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 79392 TGACAAAGATCTGCAT 79377 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || || |||| |||||| || | || | | | || ||||| ||||||||||| || ||| Sbjct 80059 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 80000 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || ||||| || |||||||| | |||| || | ||||||||| || || Sbjct 79999 -AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 79941 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || | | || | ||||| | ||||| Sbjct 79940 GATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCCA 79882 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || || || || ||||| |||||||| Sbjct 79881 CCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 79833 >seq1891 Length=27579 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| ||||| | |||| ||||| || || ||||| ||| || ||||| ||||| Sbjct 11434 AACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTACGACCATCCTC 11493 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 || |||||||||| |||| | | ||| ||||||||||| |||||||| || || | Sbjct 11494 CAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCTTCCTTATC-CT 11552 Query 138525 GATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 || | |||| || |||| || | |||||| | ||| ||||||| || | || Sbjct 11553 GAATCTTTGCCTTGACATTG-TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTC 11611 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| || ||||| || ||||| ||||| Sbjct 11612 TTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 11643 >seq530 Length=553347 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||| || ||||| || || || || | Sbjct 260635 GACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCG 260576 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| |||||||| ||||| ||| || || | Sbjct 260575 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACG 260516 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | || | || || ||||| ||||| || Sbjct 260515 TTGTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATAGTCTTTCCAGTGAGAGTCTTC 260456 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 260455 ACAAAGATCTGCAT 260442 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | |||||||| ||||||||||| || | Sbjct 260440 CCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCC 260381 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || ||||| || |||| |||| | | ||| ||||||||||| Sbjct 260380 AAAGTTCTGCCA-TCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 260322 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| |||||||| ||| | || | ||| | |||| | | |||||| | |||| Sbjct 260321 AATACCCTCTTTGTCT-TGAATCTTGGCTTTGACATTGT-CGATGGTGTCAGAGCTCTCC 260264 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | || || || |||| || || |||||||||||||| Sbjct 260263 ACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214 >seq912 Length=1276171 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | || ||||| | | ||||||| ||||| ||||||||||| | Sbjct 751612 CCACCTCTGAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCC 751553 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || ||||| | | |||| || | ||| |||||||| || Sbjct 751552 AGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 751493 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || ||||| || ||| | || | ||| |||| || | |||||| | ||| | Sbjct 751492 ATTCCCTCTTTATC-CTGAATCTTAGCTTTGACATTG-TCAATGGTGTCTGAGCTCTCAA 751435 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | |||||||| || ||||| || ||||| || ||||| Sbjct 751434 CCTCTAGAGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| | |||||| || || ||||| | Sbjct 751351 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCCTCAAGCTGCTTACCAGCG 751292 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 | || || | ||| ||||||||||| || ||||| ||||| ||| | |||| || | Sbjct 751291 AAAATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTC-CTGAATCTTTGCCTTGAC 751233 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | || ||||| | || | ||||| ||||||||||| | Sbjct 751232 GTTG-TCAATAGTGTCAGAACTTTCAACCTCAAGGGTGATGGTTTTGCCAGTCAGAGTCT 751174 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 751173 TGACAAAGATCTGCAT 751158 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || || | ||| ||||| | |||| || || || || ||||| || | Sbjct 751156 CCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCC 751097 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || || ||||| | |||| | | || ||||||||||| Sbjct 751096 AAGGTACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGA 751037 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| ||| || | |||| || | |||||| | ||| || Sbjct 751036 ATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTG-TCGATGGTGTCAGAACTCTCAAC 750978 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || |||||||| || ||||| ||||||| ||||| Sbjct 750977 CTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 750930 >seq895 Length=2238827 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| ||| || || ||||| |||| Sbjct 1033424 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCG 1033483 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||||| |||||||| || || ||||| ||||| ||| || ||| | | Sbjct 1033484 AAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTCACA 1033543 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| |||| ||| || ||||| | || | || || || || || ||||| Sbjct 1033544 TTG-TCGATGGTATCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 1033602 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1033603 CACGAAGATCTGCAT 1033617 >seq713 Length=176098 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || |||| | ||| | || ||||| | | | ||||| |||||||||||||| || || Sbjct 45756 CCACCTCTGAGACGAAGCACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAGC- 45698 Query 138447 CATAGTACGCGA--GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504 ||| |||| |||||| || || ||||| | | |||| || | ||| || |||||| Sbjct 45697 --GAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 45640 Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTC 138563 || || ||||| || || ||| | || | ||||| | || | || || | || Sbjct 45639 GGGATTCCTTCCTTATC-CTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTC 45581 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | ||||| ||||||| || || |||||||||||||| Sbjct 45580 AACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 45530 >seq1780 Length=424430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 138411 ATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTG 138470 ||| | | |||||||||| || |||||||| || | ||| || || |||||||| Sbjct 97253 ATGGAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTCCGACCATCTTCGAGTTG 97312 Query 138471 TTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTT 138530 || || | | |||| || | ||||||||| || || || ||||||||||| ||| | | Sbjct 97313 CTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCTTTGTC-CTGAATCT 97371 Query 138531 TTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAG 138589 | | || | | || | ||||| | ||| || || | || | ||| || || | Sbjct 97372 TGGACTTCAGGTTATCGATTGTGTCCGAGCTCTCAACTTCCAAAGTTATCGTCTTTCCGG 97431 Query 138590 TCAGAGTTTTTACAAAAATCTGCAT 138614 | ||||| || |||||||||||||| Sbjct 97432 TAAGAGTCTTGACAAAAATCTGCAT 97456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496248510856080