Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq1013 118 8e-22
seq713 109 4e-19
seq895 105 5e-18
seq1891 104 2e-17
seq1311 104 2e-17
seq687 100 2e-16
seq530 96.9 2e-15
seq788 95.1 9e-15
seq980 93.3 3e-14
seq912 93.3 3e-14
seq507 93.3 3e-14
seq1780 87.8 1e-12
seq400 86.0 4e-12
>seq1013
Length=1118043
Score = 118 bits (130), Expect = 8e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| |||| || | || || |||||||| || || ||||| || ||||||||||| |
Sbjct 384609 CCTCCTCTCAGACGTAGCACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGCG 384668
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| |||| ||||||| |||||||| || ||| | ||||| || || || || |||
Sbjct 384669 AGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGG 384728
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||||||||| ||| || ||| ||| | || || || || ||| ||
Sbjct 384729 ATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAACC 384788
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|||||||| || || || || || || ||||| || || || ||||| ||
Sbjct 384789 TCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 384838
>seq713
Length=176098
Score = 109 bits (120), Expect = 4e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| |||||||||||||| |||||||| ||||||||||| ||| | | |||| ||
Sbjct 45738 ACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAGCGAGTGTGCGACCGTCCTCA 45679
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || ||||| | || | | ||| || || || ||||||||||| || |
Sbjct 45678 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGA 45619
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| | || |||||||| | |||| || || || || ||||||||
Sbjct 45618 ATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTTG 45559
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| || || |||||||| ||||||
Sbjct 45558 CCAGTCAACGTCTTCACAAAAATCTGCATA 45529
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| || || | ||| ||||| || || || || || || || |||||||| ||
Sbjct 45528 CCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCC 45469
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | | ||||||| ||||| |||||| | ||||| | ||| ||||| ||
Sbjct 45468 AAGG-TACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGG 45410
Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||| |||||||| || ||| ||||| || ||| | || || || || | || |
Sbjct 45409 AATACCTTCCTTATCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAA 45351
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || | |||||||| || || || || ||||| || |||||||||||
Sbjct 45350 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 45302
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025
||| || ||||| || || || || || ||||||||||| ||| | | | | | || |
Sbjct 46423 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT-AAAGTCCGACCATCCT 46365
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
| | ||||| |||||| | || | | ||||||||| ||| || || ||||||||
Sbjct 46364 CGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCT 46305
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
||| || || ||| | || || || || | || || || || |||||||| |
Sbjct 46304 GAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAAMGTAATGGTCT 46245
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||||| |||||| ||||| |||||||||
Sbjct 46244 TGCCTGTCAAAGTTTTCACAAAGATTTGCATA 46213
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||||||||| || || || ||||||||||| | | | | | || || | |||
Sbjct 46188 TGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGTCCATCCTCAAGCTGT 46129
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | | ||||||||| |||||| || |||||||| ||| ||
Sbjct 46128 TTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATCCCCTCCTTGTCCTGAATCTTA 46069
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||| || | || || || | ||||||||||| || ||
Sbjct 46068 GCCTTGACATTATCGATAGTGTCTGAGCTCTCAACCTCCAGAGTAATGGTTTTCCCAGTA 46009
Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || ||||||
Sbjct 46008 AGGGTCTTCACAAAGATCTGCATA 45985
>seq895
Length=2238827
Score = 105 bits (116), Expect = 5e-18
Identities = 148/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||| || || || || || |||||||| ||| ||| | | ||||||| | ||
Sbjct 1033414 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTG 1033473
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||| || ||| | ||||| ||||| ||||| ||| |||||||||||||| || ||
Sbjct 1033474 TTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTT 1033533
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
||| ||| | || || |||||| ||| || |||| ||| ||||| || || ||
Sbjct 1033534 CGCTTTCACATTGTCGATGGTATCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGT 1033593
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180
|| ||||| || || || ||||| |||
Sbjct 1033594 TAGGGTTTTCACGAAGATCTGCATCTTT 1033621
>seq1891
Length=27579
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| |||||||| ||||| || || |||||||| ||| | | |||| ||
Sbjct 10979 ACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTCA 11038
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || ||||| | || | | ||| || || ||||||||||||||||| |
Sbjct 11039 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGA 11098
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| | || || ||||| | |||| || || || |||||||||||
Sbjct 11099 ATCTTAGCTTTAACATTGTCAATCGTATCCGAACTTTCAACCTCCAAAGTAATGGTTTTC 11158
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||||| || || ||||| || ||||||
Sbjct 11159 CCTGTCAATGTCTTCACAAAGATCTGCATA 11188
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025
||| || ||||| || || || || || ||||||||||| ||| | | | | | || |
Sbjct 10294 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT-AAAGTCCGACCATCCT 10352
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
| | ||||| |||||| | || | | ||||||||| ||| || || ||||||||
Sbjct 10353 CGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCT 10412
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
||| || || ||| | || || || || | || || || || |||||||| |
Sbjct 10413 GAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCT 10472
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||||| |||||| ||||| |||||||||
Sbjct 10473 TGCCTGTCAAAGTTTTCACAAAGATTTGCATA 10504
Score = 86.0 bits (94), Expect = 4e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| |||||||| || ||||| ||||||||||| || | | | ||||| | ||
Sbjct 11212 ATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCAAGCTG 11271
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| ||||| | || | | ||| || || |||||||| || || || ||| ||
Sbjct 11272 CTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATTCCCTCTTTATCCTGAATCTT 11331
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
||| ||| | || |||||||| | |||| || || || || |||||||| || ||
Sbjct 11332 AGCTTTCACATTATCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTTGCCAGT 11391
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
|| || || |||||||| ||||||
Sbjct 11392 CAACGTCTTCACAAAAATCTGCATA 11416
>seq1311
Length=673479
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| || ||||| ||||| || |||||||| || ||| |||| |||| ||
Sbjct 79813 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTCA 79754
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || || || | || | | ||||||||| |||||||||||||||||
Sbjct 79753 AGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTGG 79694
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| ||| ||| | || || || || | | || || || | |||||||||||||
Sbjct 79693 ATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCAACCTCGAGGGTAATGGTTTTA 79634
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || ||||| || ||||||
Sbjct 79633 CCAGTGAGGGTCTTCACAAAGATCTGCATA 79604
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||| |||| | || || | ||||||||||| || || || ||||||||||| |||
Sbjct 80059 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 80000
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
| | | | | || || | ||||| |||||| | || | | ||||||||| |||
Sbjct 79999 AA-AGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 79941
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| ||||||||||| ||| || || ||| | || || || || | || ||
Sbjct 79940 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCCAC 79881
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || || || || || || ||||| || ||||||
Sbjct 79880 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 79832
>seq687
Length=897029
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||| || || || ||||| ||||||||||| ||| | | | || || | |||
Sbjct 268728 TGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCAAGTTGC 268669
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
||||||||| | || | | ||||||||| || |||||||| ||||| ||| ||
Sbjct 268668 TTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGAATCTTA 268609
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||| ||| | || || || || | || || |||| |||||||||||||| ||
Sbjct 268608 GCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTACCGGTA 268549
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
|||||||| ||||| || |||||
Sbjct 268548 AGAGTTTTCACAAATATCTGCAT 268526
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| ||| || | ||| || |||||||| || |||||||| || ||||||||
Sbjct 268068 CCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAGCC 268009
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | |||| || | |||||| || || | || | | ||| ||||| ||
Sbjct 268008 AAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCGGG 267949
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|||||||||||||| || ||||| || ||| | || || || || |||| ||
Sbjct 267948 ATTCCTTCCTTGTCTTGGATCTTTGC-CTTGACATTGTCAATTGTGTCAGAGCTTTCGAC 267890
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || ||||| || || || ||||| || || || || ||||||
Sbjct 267889 CTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCATA 267841
>seq530
Length=553347
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| || || ||||| || || || || || ||||||||||| | | |||| | |||
Sbjct 260425 AAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCCAAAGTTCTGCCATCT 260366
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| | ||| || || ||| | ||||| | ||| ||||| ||||| || || |||||
Sbjct 260365 TCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCTTTGTCT 260306
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
||| ||| ||| ||| | || || || || | || || || || ||||||||
Sbjct 260305 TGAATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACTTCCAAAGTAATGGTC 260246
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| ||||||| || || |||||||| ||||||
Sbjct 260245 TTTCCTGTCAATGTCTTGACAAAAATCTGCATA 260213
>seq788
Length=1574065
Score = 95.1 bits (104), Expect = 9e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006
||||||| || | |||| || || |||||||| || || || || |||||||| || |
Sbjct 693804 TGCCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 693745
Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066
|| || | | | || || | ||||| |||||| | || | |||||| |||||
Sbjct 693744 CTAAGG-TGCGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 693686
Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126
||||| ||||||||||| || ||| || ||| | || || || || | ||
Sbjct 693685 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCC 693626
Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || | ||| ||||| ||||| |||| ||| || ||||| || ||||||
Sbjct 693625 ACTTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCATA 693575
Score = 93.3 bits (102), Expect = 3e-14
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||| | ||| || |||||||||||||| || || || |||||||| ||
Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| ||||||| | ||| || || ||| | ||||| | ||| ||||| |||
Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || ||||| || ||| ||| ||| | || || || || | || ||
Sbjct 108131 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCYACC 108072
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || || || |||| || || || || |||||||||
Sbjct 108071 TCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 108024
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||| | ||| || |||||||||||||| || || || |||||||| ||
Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| ||||||| | ||| || || ||| | ||||| | ||| ||||| |||
Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || ||||| || ||| ||| ||| | || || || || | || ||
Sbjct 100695 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACC 100636
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || || || |||| || || || || |||||||||
Sbjct 100635 TCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 100588
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAAT-CGCTGAGAATTCTCGCGTC 15023
|| || || |||||||| || || || || |||||||||| ||| || | | ||||
Sbjct 101028 AACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAAG-GTACGACCGTC 100970
Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083
|| || || || || ||| | ||||| | ||| ||||| || || |||||||| ||
Sbjct 100969 CTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTATC 100910
Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143
|| ||| ||| || | || || || || | | || || || ||||| |||||
Sbjct 100909 CTGGATCTTGGCTTTCACGTTGTCGATGGTGTCTGAACTCTCCACCTCCAAGGTGATGGT 100850
Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || |||||||| ||||||
Sbjct 100849 CTTTCCGGTGAGAGTCTTCACAAAAATCTGCATA 100816
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAAT-CGCTGAGAATTCTCGCGTC 15023
|| || || |||||||| || || || || |||||||||| ||| || | | | ||
Sbjct 108464 AACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAAG-GTACGACCATC 108406
Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083
|| || ||||| || ||| | ||||| | ||| ||||| || || |||||||| ||
Sbjct 108405 CTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTATC 108346
Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143
|| ||| || || | || ||||| || | | || || || ||||| |||||
Sbjct 108345 CTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACCTCCAAGGTGATGGT 108286
Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || |||||||| ||||||
Sbjct 108285 CTTTCCGGTGAGAGTCTTCACAAAAATCTGCATA 108252
>seq980
Length=1630315
Score = 93.3 bits (102), Expect = 3e-14
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| || || | ||| ||||| || || || || || || || |||||||| ||
Sbjct 2852 CCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCC 2911
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | | ||||||| ||||| |||||| | ||||| | ||| ||||| ||
Sbjct 2912 AAGG-TACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGG 2970
Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||| |||||||| || ||| ||||| || ||| | || || || || | || |
Sbjct 2971 AATACCTTCCTTATCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAA 3029
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || | |||||||| || || || || ||||| || |||||||||||
Sbjct 3030 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 3078
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| |||||||| || || || ||||||||||| | | | | | || ||
Sbjct 2414 ACCAAATGGAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCA 2473
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| ||||| |||||| | || | | ||||||||| ||| || |||||||||||
Sbjct 2474 AGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGG 2533
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| | || ||||| || | || || || || |||||||| ||
Sbjct 2534 ATCTTAGCTTTAACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTTT 2593
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || ||||| || ||||||
Sbjct 2594 CCAGTGAGGGTCTTCACAAATATCTGCATA 2623
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/211 (69%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025
||| || ||||| || || || || || ||||||||||| ||| | | | | | || |
Sbjct 1957 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT-AAAGTCCGACCATCCT 2015
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
| | ||||| |||||| | || | | ||||||||| ||| || || ||||||||
Sbjct 2016 CGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCT 2075
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
||| || || || | || || || || | || || || || ||||| || |
Sbjct 2076 GAATCTTAGCCTTGACRTTATCGATTGTGTCTGAGCTCTCAACCTCCAAVGTAATRGTCT 2135
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| ||||||| ||| || ||||| ||||||||
Sbjct 2136 TGCCTGTCAAAGTYTTCACAAAGATTTGCAT 2166
>seq912
Length=1276171
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||| || || || || || |||||||| || ||| | || |||| || | ||
Sbjct 751360 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCCTCAAGCTGC 751301
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092
|| |||||| | || | | ||| ||||| || |||||||||||||| ||| |||
Sbjct 751300 TTACCAGCGAAAATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATCTTT 751241
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| || || | || ||||| || | |||| || || | ||| |||||||| || ||
Sbjct 751240 GC-CTTGACGTTGTCAATAGTGTCAGAACTTTCAACCTCAAGGGTGATGGTTTTGCCAGT 751182
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
|||||| || ||||| || ||||||
Sbjct 751181 CAGAGTCTTGACAAAGATCTGCATA 751157
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| || ||||| || || || || || ||||||||||| ||| | | | || ||
Sbjct 752279 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTC 752220
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| ||||| |||||| | || | | ||||||||| || || |||||||||||
Sbjct 752219 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTG 752160
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||| ||| || || | || || || || | || || || |||||||| || ||
Sbjct 752159 AATCTTGGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTT 752100
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|||||||| ||| || ||||| ||||||||
Sbjct 752099 ACCTGTCAAAGTCTTCACAAAGATTTGCAT 752070
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| || | | ||| ||||| || || || ||||| || || |||||||| ||
Sbjct 751156 CCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCC 751097
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | | ||||||| || || |||||| | ||||| | || ||||| ||
Sbjct 751096 AAGG-TACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGG 751038
Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||| ||||||||||| || ||||| || ||| | || || || || | | || |
Sbjct 751037 AATACCTTCCTTGTCCTGGATCTTTGC-CTTAACATTGTCGATGGTGTCAGAACTCTCAA 750979
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || | || ||||| ||||| || || ||||| ||||||| ||||||
Sbjct 750978 CCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 750930
>seq507
Length=413332
Score = 93.3 bits (102), Expect = 3e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| || ||||| || || || || || ||||||||||| ||| | | | || ||
Sbjct 379412 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGACCATCCTC 379353
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| ||||| |||||| |||| | | ||||||||| || || |||||||||||
Sbjct 379352 AAGCTGTTTCCCAGCGAATATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTG 379293
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||| ||| || || | || ||||| || | || || || | |||||| || ||
Sbjct 379292 AATCTTGGCCTTGACGTTATCAATAGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCTT 379233
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||||| ||| || ||||| |||||||||
Sbjct 379232 GCCTGTCAAAGTCTTCACAAAGATTTGCATA 379202
>seq1780
Length=424430
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||| || || || ||||| ||||||||||| ||| | | | || || | |||
Sbjct 97026 TGAAGTGTTGACTCCTTTTGGATGTTGTAATCAGCAAGAGTGCGGCCATCCTCAAGCTGT 97085
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | | ||||||||| |||||| ||||| ||||| || |||
Sbjct 97086 TTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTG 97145
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|||||| | || || ||||| | || || || || || || || || || ||
Sbjct 97146 GCCTTTACATTGTCGATTGTATCCGAGCTCTCAACTTCCAAAGTTATAGTCTTTCCGGTA 97205
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
||||| || ||||||| ||||||
Sbjct 97206 AGAGTCTTGACAAAAACTTGCAT 97228
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | || | ||| || || || |||||||| |||||||||||
Sbjct 97458 CCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCTGCA 97517
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| ||| | || || | ||||| |||||| | || | | |||||| || ||
Sbjct 97518 AGCGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGGAGGG 97577
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||||||||| || || ||| || | || || || || | | || ||
Sbjct 97578 ATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTCTCGACT 97637
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||||||||||||||| || || || || || || || ||||||
Sbjct 97638 TCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACGAATATCTGCATA 97685
>seq400
Length=13612
Score = 86.0 bits (94), Expect = 4e-12
Identities = 165/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | ||| || || ||||| || ||||| || || |||||||||
Sbjct 2047 CCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 2106
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | ||||||| ||||| || ||| | || || | ||| ||||| |||
Sbjct 2107 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 2166
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| ||||||||||| ||| ||||| || ||| | || || || || | || ||
Sbjct 2167 ATGCCTTCCTTGTCCTGAATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 2225
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188
|| | || ||||| || || || || ||||| ||||| |||||| || |||||| ||
Sbjct 2226 CTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGC--ATCTGAAATTAA 2283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357382247554115
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |