Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1891 140 3e-28 seq980 127 2e-24 seq713 127 2e-24 seq1206 118 1e-21 seq400 111 1e-19 seq687 109 5e-19 seq788 107 2e-18 seq1013 104 2e-17 seq912 104 2e-17 seq530 104 2e-17 seq895 100 3e-16 seq507 100 3e-16 >seq1891 Length=27579 Score = 140 bits (154), Expect = 3e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || ||||||||||| |||||||| |||||| | ||| | ||| |||| || Sbjct 11440 ATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTACGACCATCCTCCAGCTG 11499 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || ||| | ||||||| ||||||||||| ||||| ||||| ||||| ||||| || Sbjct 11500 TTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCTTCCTTATCCTGAATCTT 11559 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | |||| || | |||||| || ||| || |||||||||| || ||||| || Sbjct 11560 TGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 11619 Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || |||||||||||| Sbjct 11620 AAGTGTTTTCACGAAAATTTGCATC 11644 >seq980 Length=1630315 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| |||||||||||||| |||||||| ||||| | ||| | ||| || | || Sbjct 2875 ATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCTAGCTG 2934 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || ||| | ||||||| |||||||| || ||||| ||||| ||||| ||||| || Sbjct 2935 TTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGAATCTT 2994 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | || | || | |||||| || ||| || |||||||||| || ||||| || Sbjct 2995 TGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 3054 Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || |||||||||||| Sbjct 3055 GAGTGTTTTCACGAAAATTTGCATC 3079 >seq713 Length=176098 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| |||||||||||||| |||||||| ||||| | ||| | ||| || | || Sbjct 45505 ATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCTAGCTG 45446 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || ||| | ||||||| |||||||| || ||||| ||||| ||||| ||||| || Sbjct 45445 TTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGAATCTT 45386 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | || | || | |||||| || ||| || |||||||||| || ||||| || Sbjct 45385 TGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 45326 Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || |||||||||||| Sbjct 45325 GAGTGTTTTCACGAAAATTTGCATC 45301 >seq1206 Length=1516661 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || || || |||||||||||||| ||||| || |||||| Sbjct 451371 CCACCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 451430 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | || ||||| ||| | |||||||| ||||||||||| || Sbjct 451431 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 451490 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || ||||| || || |||| || | |||||| || |||||||| Sbjct 451491 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 451550 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| | ||| || || ||||| ||||| || || || |||||| Sbjct 451551 TCAAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 451598 >seq400 Length=13612 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || |||||||| || |||||||| |||||| | ||| ||| || | ||| Sbjct 2071 TGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCCAAGGTACGGCCATCTTCTAGCTGT 2130 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | || |||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct 2131 TTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTT 2190 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | || | |||||| || ||| || |||||||| | || ||||| || Sbjct 2191 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTG 2250 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 || ||||| ||||| ||||||||| Sbjct 2251 AGTGTTTTCACAAAGATTTGCATC 2274 >seq687 Length=897029 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || ||||| ||||||||||| || ||||| | || | ||| || Sbjct 268734 ACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCA 268675 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || ||| | || | || || |||||||| || || |||||||| |||||| Sbjct 268674 AGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGA 268615 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || ||| | || | |||||| || ||| ||||| ||||||| ||||| Sbjct 268614 ATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTA 268555 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| |||||||| ||||| || |||||| Sbjct 268554 CCGGTAAGAGTTTTCACAAATATCTGCATC 268525 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || |||||||| || ||||| || ||||| | ||| | ||| || | ||| Sbjct 268501 ATGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGTTG 268442 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || ||| | || | || ||||||||||| || || ||||| ||||||||||| || Sbjct 268441 CTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTT 268382 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 ||| | || | ||||| || ||| || || | ||| | |||||||| | Sbjct 268381 AGCTTTAACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCAAT 268322 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| ||||| || ||||| Sbjct 268321 GAGGGTTTTCACAAAGATCTGCAT 268298 >seq788 Length=1574065 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | |||||| | || || || || ||||| ||||| || ||||| Sbjct 101046 ATACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 100987 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || ||||| || ||||| ||| | ||||| | ||||||||||| Sbjct 100986 GCCAAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 100927 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| ||||| || || || ||| | || | || | |||||| ||| ||| Sbjct 100926 GGGATACCTTCCTTATCCTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCTGAACTCTC 100868 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || || ||||| ||||| || |||||||| ||||| Sbjct 100867 CACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | |||||| | || || || || ||||| ||||| || ||||| Sbjct 108482 ATACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 108423 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||| |||||||| ||| | ||||| | ||||||||||| Sbjct 108422 GCCAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 108363 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| ||||| || || || || | || | || | ||||| ||| ||| Sbjct 108362 GGGATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATAGTGTCTGAACTCTC 108304 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || | || || ||||| ||||| || |||||||| ||||| Sbjct 108303 CACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || ||||| | ||| | || || || || ||||| ||||| || || || Sbjct 108710 ATACCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCC 108651 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| || | |||||||| ||| | || | || ||||||||||| Sbjct 108650 GCCAAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 108591 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || || || || || || | || | || | |||||| || ||| Sbjct 108590 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTCTC 108532 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| ||||| | ||| ||||| || | ||| || || || || ||||| Sbjct 108531 GACTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 108481 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| | || || || || |||||||||||||| || || Sbjct 108935 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCC 108876 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| || | |||||||| ||| | || | || ||||||||||| || Sbjct 108875 AAGGTGCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 108816 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || ||||| || || || || || || | || | || | |||||| || ||| || Sbjct 108815 ATACCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTCTCTAC 108757 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| |||| || || ||||| ||||| || || ||| | ||||| Sbjct 108756 CTCGAGGGTAATGGTCTTCCCGGTCAGAGTCTTCACGAAARTCTGCAT 108709 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || || | ||| || | || || || || ||||| || || || || || Sbjct 693349 ATACCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCA 693290 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | ||| ||||| ||| | ||||||| ||||||||||| Sbjct 693289 GCCAAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGT 693230 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || ||||| ||||| || || |||| || | || | |||||| ||| ||| Sbjct 693229 GGGATACCCTCTTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAACTCTC 693171 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | || || || || | ||| || || ||||| ||||| Sbjct 693170 CACCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 || || || |||||||| | || | || || || |||||||| |||||||| ||||| Sbjct 107798 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCA 107739 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 || ||| | ||| || | |||||||| ||| | || | | ||||| ||||| Sbjct 107738 GCCAACG-TGCGGCCATCTTCTAGCTGTTTTCCGGCGAAAATAAGCCTYTGCTGATCCGG 107680 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288 ||||||||||| || || || | | || | | | || | || | |||||| || | Sbjct 107679 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTT 107621 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | || ||||| || | || || ||||| || || || ||||| || |||||| Sbjct 107620 CCACCTCGAGGGTGATAGTCTTTCCGGTGAGTGTCTTAACAAAGATCTGCATC 107568 >seq1013 Length=1118043 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||| ||||| ||||| || ||||| || ||||| || ||| | || || Sbjct 384626 CACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGCGAGTGTTCTTCCGTCTTC 384685 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 |||||||||||| ||| | ||||| |||||||| ||||| || || ||||| || ||||| Sbjct 384686 CAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGGATTCCTTCCTTGTCTTG 384745 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||| || ||| | || | ||||| || || || || || | || | || || Sbjct 384746 AATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAACCTCTAAGGTTATTGTCTT 384805 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| ||||| || || || ||||| Sbjct 384806 CCCCGTTAGGGTTTTCACGAAGATCTGCAT 384835 >seq912 Length=1276171 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || |||||||| || |||||||| ||||| | ||| ||| || | || Sbjct 751133 ATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCCAAGGTACGGCCATCTTCTAGCTG 751074 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || ||| | ||||||| |||||||||||| ||||| ||||| || || || || || Sbjct 751073 CTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTT 751014 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 | || | || | |||||| ||| ||| || |||||||| | || || || || Sbjct 751013 TGCCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTACCAGT 750954 Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| ||||||| ||||||| Sbjct 750953 GAGTGTTTTCACAAAAACTTGCATC 750929 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| ||||| || || || ||||||||||| || ||||| Sbjct 751843 ATACCACCACGGAGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCT 751784 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | ||||| || || | || | || |||||||| || Sbjct 751783 GCAAGAGTCCGACCATCTTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 751724 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || |||||||| ||| |||| || | || | ||||| || ||| Sbjct 751723 GGGATCCCTTCCTTGTCTTGAATCTTTGCCTTGA-CGTTATCGATTGTGTCTGAGCTCTC 751665 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | || ||||| ||||| || || ||||| || ||||| Sbjct 751664 AACCTCCAAAGTGATAGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 751614 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188 ||| | ||| || ||||| || |||||||| || || || | | || | || ||| Sbjct 751595 CACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCA--GCCAGTGTGCGACCATCC 751538 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 || | || || ||||| | || | | ||||||||||| || || || |||||||| Sbjct 751537 TCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCC 751478 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 ||||| || ||||| || | |||||| || ||| || || ||||| | ||| Sbjct 751477 TGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCTAGAGTGATTGTT 751418 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||| || ||||| |||||||| Sbjct 751417 TTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386 >seq530 Length=553347 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| ||||| | ||| || | || || || || ||||| || || || ||||| Sbjct 260443 ATACCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCA 260384 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | ||| ||||| ||| | ||||| | ||||||||||| Sbjct 260383 GCCAAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 260324 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || ||||| |||||||| || ||||| || | |||||| || ||| Sbjct 260323 GGAATACCCTCTTTGTCTTGAATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCC 260264 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| || || || || | || || |||||||| ||||| Sbjct 260263 ACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 || || || |||||||| | || | || || || |||||||| |||||||| ||||| Sbjct 259987 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCA 259928 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 || ||| | | ||| ||||| |||||||| ||| | || | | ||||| ||||| Sbjct 259927 GCCAACG-TGCGACCATCCTCCAACTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGG 259869 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288 ||||||||||| || || || | | || | | | || | || | |||||| || | Sbjct 259868 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTT 259810 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 | || ||||| || | || || ||||| ||||| || || || || |||||| Sbjct 259809 CCACCTCGAGGGTGATAGTCTTACCGGTGAGAGTCTTAACGAAGATCTGCATC 259757 >seq895 Length=2238827 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || ||||| ||||| || ||||| ||||| || || ||| | Sbjct 1033391 CCACCACGGAGACGGAGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1033450 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || |||| ||||| || ||| | |||||||| ||||||||||| || Sbjct 1033451 AGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 1033510 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || ||||| || || ||| | || | ||| ||||| || || || Sbjct 1033511 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTATCGGACGATTCAACC 1033570 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || | || || || ||||| ||||| || || || |||||| Sbjct 1033571 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 1033618 >seq507 Length=413332 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || | |||||| || || || ||||||||||| || ||||| ||||| Sbjct 379204 ATACCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCC 379145 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | ||||| || ||| | || | || |||||||| || Sbjct 379144 GCAAGTGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGT 379085 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || || ||||| ||| |||| || | ||||| || ||| Sbjct 379084 GGGATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCA 379025 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||||| ||||| ||||| || || || ||||| |||||||| Sbjct 379024 ACCTCCAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCAT 378975 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || |||||||| || ||||| || |||||| | || | ||| || | ||| Sbjct 378493 TGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCCAAAGTACGACCATCCTCAAGCTGT 378434 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | || ||||||||| || ||||| ||||| || || || || ||| Sbjct 378433 TTCCCAGCAAAGATAAGTCTTTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTT 378374 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | || | |||||| || ||| || |||||||||| || ||||| || Sbjct 378373 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGTG 378314 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || |||||||||||| Sbjct 378313 AGTGTTTTCACGAAAATTTGCATC 378290 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||| || || || || || |||||||| || || || || | ||| || Sbjct 378728 CACCAAATGGAGGGTGGACTCTTTCTGGATATTGTAGTCAGCGAGTGTACGACCATCCTC 378669 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||||| || ||| | || | || ||||||||||| || || || ||||||||||| Sbjct 378668 AAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTG 378609 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || ||| | || | ||||| ||| ||| || |||||||| | ||||| Sbjct 378608 GATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGAGTGATTGTTTT 378549 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | ||| || ||||| || ||||| Sbjct 378548 GCCAGTCAAAGTCTTCACAAAGATCTGCAT 378519 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| ||||| || || || ||||||||||| || ||||| Sbjct 378976 ATACCACCACGGAGACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATGTTGTAATCC 378917 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | ||||| || ||| | || | || ||||||||||| Sbjct 378916 GCAAGTGTCCGACCATCTTCAAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGT 378857 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| || |||| || | ||||| || ||| Sbjct 378856 GGGATCCCTTCCTTGTCTTGAATCTTAGCCTTGACATTATCAATCGTGTCTGAGCTCTCA 378797 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | || |||||||| || || || || ||||| ||||| Sbjct 378796 ACCTCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 378747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451990549560440