Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1891 140 3e-28
seq980 127 2e-24
seq713 127 2e-24
seq1206 118 1e-21
seq400 111 1e-19
seq687 109 5e-19
seq788 107 2e-18
seq1013 104 2e-17
seq912 104 2e-17
seq530 104 2e-17
seq895 100 3e-16
seq507 100 3e-16
>seq1891
Length=27579
Score = 140 bits (154), Expect = 3e-28
Identities = 154/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || ||||||||||| |||||||| |||||| | ||| | ||| |||| ||
Sbjct 11440 ATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTACGACCATCCTCCAGCTG 11499
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
||| || ||| | ||||||| ||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct 11500 TTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCTTCCTTATCCTGAATCTT 11559
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| |||| || | |||||| || ||| || |||||||||| || ||||| ||
Sbjct 11560 TGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 11619
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 11620 AAGTGTTTTCACGAAAATTTGCATC 11644
>seq980
Length=1630315
Score = 127 bits (140), Expect = 2e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| |||||||||||||| |||||||| ||||| | ||| | ||| || | ||
Sbjct 2875 ATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCTAGCTG 2934
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
||| || ||| | ||||||| |||||||| || ||||| ||||| ||||| ||||| ||
Sbjct 2935 TTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGAATCTT 2994
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| || | || | |||||| || ||| || |||||||||| || ||||| ||
Sbjct 2995 TGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 3054
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 3055 GAGTGTTTTCACGAAAATTTGCATC 3079
>seq713
Length=176098
Score = 127 bits (140), Expect = 2e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| |||||||||||||| |||||||| ||||| | ||| | ||| || | ||
Sbjct 45505 ATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCTAGCTG 45446
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
||| || ||| | ||||||| |||||||| || ||||| ||||| ||||| ||||| ||
Sbjct 45445 TTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGAATCTT 45386
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| || | || | |||||| || ||| || |||||||||| || ||||| ||
Sbjct 45385 TGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 45326
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 45325 GAGTGTTTTCACGAAAATTTGCATC 45301
>seq1206
Length=1516661
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || || || |||||||||||||| ||||| || ||||||
Sbjct 451371 CCACCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 451430
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || || | || ||||| ||| | |||||||| ||||||||||| ||
Sbjct 451431 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 451490
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || ||||| || || |||| || | |||||| || ||||||||
Sbjct 451491 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 451550
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| | ||| || || ||||| ||||| || || || ||||||
Sbjct 451551 TCAAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 451598
>seq400
Length=13612
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || |||||||| || |||||||| |||||| | ||| ||| || | |||
Sbjct 2071 TGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCCAAGGTACGGCCATCTTCTAGCTGT 2130
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || |||| ||||||||||| ||||||||||| || || ||||| |||
Sbjct 2131 TTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTT 2190
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | |||||| || ||| || |||||||| | || ||||| ||
Sbjct 2191 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTG 2250
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| ||||| |||||||||
Sbjct 2251 AGTGTTTTCACAAAGATTTGCATC 2274
>seq687
Length=897029
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| || || || ||||| ||||||||||| || ||||| | || | ||| ||
Sbjct 268734 ACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGAGTGCGACCATCCTCA 268675
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| || || ||| | || | || || |||||||| || || |||||||| ||||||
Sbjct 268674 AGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGA 268615
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| || ||| | || | |||||| || ||| ||||| ||||||| |||||
Sbjct 268614 ATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTA 268555
Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| |||||||| ||||| || ||||||
Sbjct 268554 CCGGTAAGAGTTTTCACAAATATCTGCATC 268525
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || |||||||| || ||||| || ||||| | ||| | ||| || | |||
Sbjct 268501 ATGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGTTG 268442
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| || ||| | || | || ||||||||||| || || ||||| ||||||||||| ||
Sbjct 268441 CTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTT 268382
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
||| | || | ||||| || ||| || || | ||| | |||||||| |
Sbjct 268381 AGCTTTAACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCAAT 268322
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| ||||| || |||||
Sbjct 268321 GAGGGTTTTCACAAAGATCTGCAT 268298
>seq788
Length=1574065
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | |||||| | || || || || ||||| ||||| || |||||
Sbjct 101046 ATACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 100987
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | || ||||| || ||||| ||| | ||||| | |||||||||||
Sbjct 100986 GCCAAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 100927
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| ||||| || || || ||| | || | || | |||||| ||| |||
Sbjct 100926 GGGATACCTTCCTTATCCTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCTGAACTCTC 100868
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | || || ||||| ||||| || |||||||| |||||
Sbjct 100867 CACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | |||||| | || || || || ||||| ||||| || |||||
Sbjct 108482 ATACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 108423
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| |||||||| ||| | ||||| | |||||||||||
Sbjct 108422 GCCAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 108363
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| ||||| || || || || | || | || | ||||| ||| |||
Sbjct 108362 GGGATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATAGTGTCTGAACTCTC 108304
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | || || ||||| ||||| || |||||||| |||||
Sbjct 108303 CACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || ||||| | ||| | || || || || ||||| ||||| || || ||
Sbjct 108710 ATACCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCC 108651
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | |||||||| ||| | || | || |||||||||||
Sbjct 108650 GCCAAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 108591
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || || || || || || | || | || | |||||| || |||
Sbjct 108590 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTCTC 108532
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| ||||| | ||| ||||| || | ||| || || || || |||||
Sbjct 108531 GACTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 108481
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | ||| | || || || || |||||||||||||| || ||
Sbjct 108935 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCC 108876
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| | ||| || | |||||||| ||| | || | || ||||||||||| ||
Sbjct 108875 AAGGTGCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 108816
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|| ||||| || || || || || || | || | || | |||||| || ||| ||
Sbjct 108815 ATACCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTCTCTAC 108757
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| |||| || || ||||| ||||| || || ||| | |||||
Sbjct 108756 CTCGAGGGTAATGGTCTTCCCGGTCAGAGTCTTCACGAAARTCTGCAT 108709
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || | ||| || | || || || || ||||| || || || || ||
Sbjct 693349 ATACCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCA 693290
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | ||| ||||| ||| | ||||||| |||||||||||
Sbjct 693289 GCCAAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGT 693230
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || ||||| ||||| || || |||| || | || | |||||| ||| |||
Sbjct 693229 GGGATACCCTCTTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAACTCTC 693171
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || || || || | ||| || || ||||| |||||
Sbjct 693170 CACCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| || || |||||||| | || | || || || |||||||| |||||||| |||||
Sbjct 107798 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCA 107739
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | ||| || | |||||||| ||| | || | | ||||| |||||
Sbjct 107738 GCCAACG-TGCGGCCATCTTCTAGCTGTTTTCCGGCGAAAATAAGCCTYTGCTGATCCGG 107680
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288
||||||||||| || || || | | || | | | || | || | |||||| || |
Sbjct 107679 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTT 107621
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || ||||| || | || || ||||| || || || ||||| || ||||||
Sbjct 107620 CCACCTCGAGGGTGATAGTCTTTCCGGTGAGTGTCTTAACAAAGATCTGCATC 107568
>seq1013
Length=1118043
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | ||| ||||| ||||| || ||||| || ||||| || ||| | || ||
Sbjct 384626 CACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGCGAGTGTTCTTCCGTCTTC 384685
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|||||||||||| ||| | ||||| |||||||| ||||| || || ||||| || |||||
Sbjct 384686 CAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGGGATTCCTTCCTTGTCTTG 384745
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
||| || ||| | || | ||||| || || || || || | || | || ||
Sbjct 384746 AATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAACCTCTAAGGTTATTGTCTT 384805
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| ||||| || || || |||||
Sbjct 384806 CCCCGTTAGGGTTTTCACGAAGATCTGCAT 384835
>seq912
Length=1276171
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || |||||||| || |||||||| ||||| | ||| ||| || | ||
Sbjct 751133 ATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCCAAGGTACGGCCATCTTCTAGCTG 751074
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| || ||| | ||||||| |||||||||||| ||||| ||||| || || || || ||
Sbjct 751073 CTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTT 751014
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| || | || | |||||| ||| ||| || |||||||| | || || || ||
Sbjct 751013 TGCCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTGATGGTCTTACCAGT 750954
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| ||||||| |||||||
Sbjct 750953 GAGTGTTTTCACAAAAACTTGCATC 750929
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| ||||| || || || ||||||||||| || |||||
Sbjct 751843 ATACCACCACGGAGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCT 751784
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||||| || || | || | || |||||||| ||
Sbjct 751783 GCAAGAGTCCGACCATCTTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 751724
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| || |||||||| ||| |||| || | || | ||||| || |||
Sbjct 751723 GGGATCCCTTCCTTGTCTTGAATCTTTGCCTTGA-CGTTATCGATTGTGTCTGAGCTCTC 751665
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || ||||| ||||| || || ||||| || |||||
Sbjct 751664 AACCTCCAAAGTGATAGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 751614
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCG 45188
||| | ||| || ||||| || |||||||| || || || | | || | || |||
Sbjct 751595 CACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCA--GCCAGTGTGCGACCATCC 751538
Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248
|| | || || ||||| | || | | ||||||||||| || || || ||||||||
Sbjct 751537 TCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCC 751478
Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308
||||| || ||||| || | |||||| || ||| || || ||||| | |||
Sbjct 751477 TGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCTAGAGTGATTGTT 751418
Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||| || ||||| ||||||||
Sbjct 751417 TTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386
>seq530
Length=553347
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | ||| || | || || || || ||||| || || || |||||
Sbjct 260443 ATACCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCA 260384
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | ||| ||||| ||| | ||||| | |||||||||||
Sbjct 260383 GCCAAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 260324
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || ||||| |||||||| || ||||| || | |||||| || |||
Sbjct 260323 GGAATACCCTCTTTGTCTTGAATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCC 260264
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||||| || || || || | || || |||||||| |||||
Sbjct 260263 ACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214
Score = 95.1 bits (104), Expect = 1e-14
Identities = 164/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| || || |||||||| | || | || || || |||||||| |||||||| |||||
Sbjct 259987 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCA 259928
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | | ||| ||||| |||||||| ||| | || | | ||||| |||||
Sbjct 259927 GCCAACG-TGCGACCATCCTCCAACTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGG 259869
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288
||||||||||| || || || | | || | | | || | || | |||||| || |
Sbjct 259868 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTT 259810
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || ||||| || | || || ||||| ||||| || || || || ||||||
Sbjct 259809 CCACCTCGAGGGTGATAGTCTTACCGGTGAGAGTCTTAACGAAGATCTGCATC 259757
>seq895
Length=2238827
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || ||||| ||||| || ||||| ||||| || || ||| |
Sbjct 1033391 CCACCACGGAGACGGAGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 1033450
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || |||| ||||| || ||| | |||||||| ||||||||||| ||
Sbjct 1033451 AGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 1033510
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || ||||| || || ||| | || | ||| ||||| || || ||
Sbjct 1033511 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTATCGGACGATTCAACC 1033570
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || | || || || ||||| ||||| || || || ||||||
Sbjct 1033571 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 1033618
>seq507
Length=413332
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | |||||| || || || ||||||||||| || ||||| |||||
Sbjct 379204 ATACCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCC 379145
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||||| || ||| | || | || |||||||| ||
Sbjct 379144 GCAAGTGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCTGGT 379085
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| || || ||||| ||| |||| || | ||||| || |||
Sbjct 379084 GGGATCCCTTCCTTGTCCTGAATCTTTGCCTTGACATTATCGATTGTGTCTGAGCTCTCA 379025
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 379024 ACCTCCAGAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCAT 378975
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || |||||||| || ||||| || |||||| | || | ||| || | |||
Sbjct 378493 TGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCCAAAGTACGACCATCCTCAAGCTGT 378434
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || || | || | || ||||||||| || ||||| ||||| || || || || |||
Sbjct 378433 TTCCCAGCAAAGATAAGTCTTTGCTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTT 378374
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | |||||| || ||| || |||||||||| || ||||| ||
Sbjct 378373 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGTG 378314
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 378313 AGTGTTTTCACGAAAATTTGCATC 378290
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | ||| || || || || || |||||||| || || || || | ||| ||
Sbjct 378728 CACCAAATGGAGGGTGGACTCTTTCTGGATATTGTAGTCAGCGAGTGTACGACCATCCTC 378669
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
| ||||| || ||| | || | || ||||||||||| || || || |||||||||||
Sbjct 378668 AAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTG 378609
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || ||| | || | ||||| ||| ||| || |||||||| | |||||
Sbjct 378608 GATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGAGTGATTGTTTT 378549
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || | ||| || ||||| || |||||
Sbjct 378548 GCCAGTCAAAGTCTTCACAAAGATCTGCAT 378519
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| ||||| || || || ||||||||||| || |||||
Sbjct 378976 ATACCACCACGGAGACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATGTTGTAATCC 378917
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||||| || ||| | || | || |||||||||||
Sbjct 378916 GCAAGTGTCCGACCATCTTCAAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGT 378857
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| || |||||||| || |||| || | ||||| || |||
Sbjct 378856 GGGATCCCTTCCTTGTCTTGAATCTTAGCCTTGACATTATCAATCGTGTCTGAGCTCTCA 378797
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || |||||||| || || || || ||||| |||||
Sbjct 378796 ACCTCCAAAGTGATGGTCTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 378747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451990549560440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |