Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 98.7 1e-15
>seq1127
Length=645582
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 10249 GTGGGATAAGAAACACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAAC 10308
|| ||||||| | |||| || |||| || || || | ||||| ||||||||||||||
Sbjct 573855 GTAGGATAAGCAGCACAAGTGAGAACAAACCCTTCACCAATCTGTTCATCATCAAGGAAA 573914
Query 10309 GATTGATCGCTTTGATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCA 10368
||| || ||||| || | || || | | ||| || ||||| |||||||| | |
Sbjct 573915 CTTTGGTCAGACTGATCAACAGATCCAGACACAACTTTACCAGCACAGCTCGAACAAGAA 573974
Query 10369 CCAGCTCGGCACGAGTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTAC 10428
||||| ||||| ||||| | || || || ||||| || || || || |||| |||
Sbjct 573975 CCAGCACGGCAAGAGTATGGCAAATCGATTCCAGCTTCCTCGGCCGCGTCAAGAACGTAA 574034
Query 10429 TGATCGTCAGCACACTCAA 10447
||||| |||||||||
Sbjct 574035 ACGTCGTCGTCACACTCAA 574053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622107388282160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |