Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq895 113 5e-20
seq1206 107 2e-18
seq788 105 8e-18
seq912 98.7 1e-15
seq1891 96.9 4e-15
seq400 96.9 4e-15
seq713 93.3 5e-14
seq530 91.5 2e-13
seq980 87.8 2e-12
seq507 86.0 7e-12
>seq895
Length=2238827
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||||||| | || |||||| ||||| |||||||||| || || || |||| ||
Sbjct 1033409 ACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCC 1033468
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||| || |||||||| ||||| ||||||||||| | || | | |||||||| |
Sbjct 1033469 AGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGG 1033528
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| || | | | | || ||| |||||| || || | || ||||| ||
Sbjct 1033529 ATCTTCGCTTTCACATTGTCGATGGTATCGGACGATTCAACCTCTAGGGTTATGGTCTTC 1033588
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596
||||| || ||||| || ||||| ||||| ||
Sbjct 1033589 CCCGTTAGGGTTTTCACGAAGATCTGCATCTT 1033620
>seq1206
Length=1516661
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||| |||| || || || |||| ||||||||||| ||||||||
Sbjct 451407 TCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAA 451466
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| ||||||||||| | || | | |||||||| |||||| ||||| |
Sbjct 451467 ATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 451526
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||| || || || || | ||||| || || ||||| || ||||| ||
Sbjct 451527 TCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACG 451586
Query 46583 AAGATTTGCATTTT 46596
||||| ||||| ||
Sbjct 451587 AAGATCTGCATCTT 451600
>seq788
Length=1574065
Score = 105 bits (116), Expect = 8e-18
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||| ||||||| ||| | ||| |||||| || || |||||||| |
Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||| | |||| || || ||||| |||||||| ||||| | ||||||||| | ||
Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||| |||||| |||||| |||| | | | ||||| |||| |||
Sbjct 100695 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTC---TCC 100639
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||| ||||| || || || |||| ||| || || |||||||||||
Sbjct 100638 ACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589
Score = 104 bits (114), Expect = 3e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || | || |||||| |||| || | || |||||| ||||| |||||||| |
Sbjct 693574 CCACCACGTAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 693515
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||||| | || || ||||||||||||||||| ||||| | ||||||||| | ||
Sbjct 693514 AAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 693455
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542
| || ||||| ||| |||||| ||||| ||| | | | || || |||| ||
Sbjct 693454 ATGCCTTCCTTATCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCAGAGCTC---TC 693399
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||| |||||||| || || || || || || || ||||| |||||
Sbjct 693398 TACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 693348
Score = 102 bits (112), Expect = 9e-17
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||| ||||||| ||| | ||| |||||| || || |||||||| |
Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| ||| | |||| || || ||||| |||||||| ||||| | ||||||||| | ||
Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||| |||||| |||||| |||| | | | ||||| |||| ||
Sbjct 108131 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTC---TCY 108075
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||| ||||| || || || |||| ||| || || |||||||||||
Sbjct 108074 ACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| | || ||||| | || || ||||| || || |||||
Sbjct 693767 CTCCTTCTGGATGTTGTAGTCAGCTAAGGTGCGGCCATCCTCAAGCTGTTTTCCAGCGAA 693708
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | || ||||||||| |||||| ||| | |
Sbjct 693707 GATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 693648
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| ||||| || | |||||||| || || |||| || ||
Sbjct 693647 GTCAATGGTGTCTGAGCTC---TCCACTTCAAGGGTGATGGTCTTACCGGTCAAAGTCTT 693591
Query 46579 AACAAAGATTTGCAT 46593
|||||||| |||||
Sbjct 693590 GACAAAGATCTGCAT 693576
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||||| | ||| || | || ||||||||||| || |||||
Sbjct 693995 CTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCGAGCTGCTTTCCAGCGAA 693936
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | ||||| ||| |||||| ||| | |||
Sbjct 693935 GATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTGGATCTTGGCCTTTA-CGT 693877
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | ||||| |||| ||||| |||| ||||| || || || ||||| || |
Sbjct 693876 TGTCAATGGTGTCGGAGCTC---TCCACCTCCAGTGTGATAGTCTTCCCGGTCAGAGTCT 693820
Query 46578 TAACAAAGATTTGCAT 46593
| || || || |||||
Sbjct 693819 TCACGAAAATCTGCAT 693804
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||| || | ||| |||||| ||||| |||||||| | | ||| ||| | || ||
Sbjct 108690 CACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGCCCATCCTC 108631
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||| || || ||||| || | ||||||||||| | || | || |||||||||
Sbjct 108630 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTG 108571
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGG 46559
|||||| ||| | ||| | | | ||||| |||| || || || | ||||| |
Sbjct 108570 GATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTC---TCGACTTCAAGAGTGATCG 108515
Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| ||||| |||| || || || ||||| |||||
Sbjct 108514 TCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 108481
Score = 86.0 bits (94), Expect = 7e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||||||||||| || | || |||||| ||||| ||||| || |
Sbjct 101043 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 100984
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || || |||| || | |||||| |||||||| ||||| | ||||||||| | ||
Sbjct 100983 AAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 100924
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542
| | ||||| ||| |||||| ||| ||| | | | ||||| ||| ||
Sbjct 100923 ATACCTTCCTTATCCTGGATCTT-GGCTTTCACGTTGTCGATGGTGTCTGAACTC---TC 100868
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| |||| |||||||| || || || || || || ||||| || |||||
Sbjct 100867 CACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817
Score = 82.4 bits (90), Expect = 9e-11
Identities = 138/196 (70%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| | | ||| || | || || |||||||| || |||||
Sbjct 101236 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCCTCAAGCTGCTTTCCAGCGAA 101177
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | ||||||||| |||||| ||| | |||
Sbjct 101176 GATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCA-CGT 101118
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | ||||| |||| ||||| || | |||||||| || || |||| || |
Sbjct 101117 TGTCAATGGTGTCGGAGCTC---TCCACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCT 101061
Query 46578 TAACAAAGATTTGCAT 46593
| || || || |||||
Sbjct 101060 TCACGAAAATCTGCAT 101045
Score = 82.4 bits (90), Expect = 9e-11
Identities = 159/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||||||||||| || | || |||||| ||||| ||||| || |
Sbjct 108479 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 108420
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || || | || || | ||| || |||||||| ||||| | ||||||||| | ||
Sbjct 108419 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 108360
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542
| | ||||| ||| |||||| ||| | ||| | | | ||||| ||| ||
Sbjct 108359 ATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATAGTGTCTGAACTC---TC 108304
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| |||| |||||||| || || || || || || ||||| || |||||
Sbjct 108303 CACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253
>seq912
Length=1276171
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| | ||||| | |||| || |||||||| || |||||
Sbjct 751349 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCCTCAAGCTGCTTACCAGCGAA 751290
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||||||||| | || | | ||||||||| ||||| ||||| |||
Sbjct 751289 AATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCCTGAATCTTTGCCTTGA-CGT 751231
Query 46522 CGCCACC-GTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| || ||||| ||| || || | |||||||||||||| ||||| || || |
Sbjct 751230 TGTCAATAGTGTCAGAACTTTCAACCTCAAGGGTGATGGTTTTGCCAGTCAGAGTCTTGA 751171
Query 46581 CAAAGATTTGCAT 46593
||||||| |||||
Sbjct 751170 CAAAGATCTGCAT 751158
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| ||| | || ||| |||||||| |||||||| |
Sbjct 751612 CCACCTCTGAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCC 751553
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || |||||||| || || || || | | ||||||||| | ||
Sbjct 751552 AGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 751493
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||| || ||| ||||| |||| | | | ||||| |||| ||
Sbjct 751492 ATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TCA 751436
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | ||||| ||||| ||||| || || || ||||||||||||||
Sbjct 751435 ACCTCTAGAGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386
Score = 86.0 bits (94), Expect = 7e-12
Identities = 151/219 (69%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||| ||||| | ||| |||||||||||| ||||| || | ||||| || |
Sbjct 751829 ACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGACC 751770
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| |||||||| || || || || || | | ||||||||| | || | | |||||
Sbjct 751769 ATCTTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTT 751710
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554
||| ||||| ||||| | | | ||||| |||| || || |||| ||
Sbjct 751709 GTCTTGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTC---TCAACCTCCAAAGT 751653
Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || ||||| || || || || |||||||| |||||
Sbjct 751652 GATAGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 751614
>seq1891
Length=27579
Score = 96.9 bits (106), Expect = 4e-15
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || | || ||| || | || |||||||| || || |||||
Sbjct 10312 CTCCTTCTGGATGTTGTAATCAGCTAAAGTCCGACCATCCTCGAGCTGTTTACCAGCGAA 10371
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||| ||||| | || | | |||||||||| ||||| ||||| |
Sbjct 10372 GATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATT 10431
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || |||| ||| ||||| ||||| |||| |||||
Sbjct 10432 ATCGATTGTGTCTGAGCTC---TCAACCTCCAACGTAATGGTCTTGCCTGTCAAAGTTTT 10488
Query 46579 AACAAAGATTTGCAT 46593
||||||||||||||
Sbjct 10489 CACAAAGATTTGCAT 10503
Score = 87.8 bits (96), Expect = 2e-12
Identities = 166/243 (68%), Gaps = 6/243 (2%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| |||||||| | | |||| ||| | ||| ||||| ||||||||||| ||||
Sbjct 11417 CCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCC 11476
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || || | || || ||||| || |||||||| ||||| | ||||||||| | ||
Sbjct 11477 AAGGTACGACCATCCTCCAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGA 11536
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||||| ||| ||||| ||||| | | | ||||| |||| ||
Sbjct 11537 ATACCTTCCTTATCCTGAATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTC---TCA 11593
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAA 46603
|| || | || ||||| ||||| || || ||||| || || |||||||| | | | |||
Sbjct 11594 ACCTCGAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCATCTGGAAAAAA 11653
Query 46604 CAA 46606
||
Sbjct 11654 AAA 11656
Score = 86.0 bits (94), Expect = 7e-12
Identities = 160/231 (69%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| ||| | ||| ||| || ||||||||||| || |
Sbjct 10961 CCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAGCG 11020
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || |||||||| || || || || | | |||||| || | ||
Sbjct 11021 AGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGA 11080
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA---TTC 46542
| | ||||||||| ||||| ||| | | | | | | ||| || ||| |||
Sbjct 11081 ATTCCTTCCTTGTCCTGAATCTT-AGCTTTAACATTGTCAATCGTATC---CGAACTTTC 11136
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||| || |||||||| || |||| || || |||||||| |||||
Sbjct 11137 AACCTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 11187
>seq400
Length=13612
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||||||||| | |||| || | || || || ||||||||||| ||||
Sbjct 2047 CCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 2106
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
| || || | || || ||||| || |||||||| || || | ||||||||| | ||
Sbjct 2107 AAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 2166
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| || ||||||||| ||||| ||| | | | | ||||| |||| ||
Sbjct 2167 ATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTC---TCA 2223
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | |||||||| ||||| || || ||||| ||||||||||||||
Sbjct 2224 ACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 2273
Score = 82.4 bits (90), Expect = 9e-11
Identities = 136/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || | ||||| || | || || ||||| || || |||||
Sbjct 1170 CTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTCAAGCTGTTTTCCAGCGAA 1229
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | |||||| || | || | | ||||||||| |||||| ||||| |
Sbjct 1230 GATGAGTCTCTGCTGATCCGGAGGGATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTT 1289
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || |||| || || || ||||| |||| |||||
Sbjct 1290 ATCAATTGTGTCTGAGCTC---TCAACCTCCAAGGTAATAGTCTTGCCTGTCAAAGTTTT 1346
Query 46579 AACAAAGATTTGCAT 46593
||||||||||||||
Sbjct 1347 CACAAAGATTTGCAT 1361
Score = 82.4 bits (90), Expect = 9e-11
Identities = 157/230 (68%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | ||| | ||||| ||| | || ||| || ||||| |||||||| | |
Sbjct 1591 CCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCT 1650
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| || || | || || |||||||| ||||| || || | | ||||||||| | ||
Sbjct 1651 AGGGTACGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 1710
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543
| | ||| || ||| ||||| |||| | | | ||||| |||| ||
Sbjct 1711 ATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TCA 1767
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | ||||| ||||| || || || || || ||||||||||||||
Sbjct 1768 ACCTCGAGGGTGATTGTTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817
>seq713
Length=176098
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || | || ||| || | || |||||||| || || |||||
Sbjct 46405 CTCCTTCTGGATGTTGTAATCAGCTAAAGTCCGACCATCCTCGAGCTGTTTACCAGCGAA 46346
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||| ||||| | || | | |||||||||| ||||| ||||| |
Sbjct 46345 GATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTGACATT 46286
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || |||| || ||||| ||||| |||| |||||
Sbjct 46285 ATCGATTGTGTCTGAGCTC---TCAACCTCCAAMGTAATGGTCTTGCCTGTCAAAGTTTT 46229
Query 46579 AACAAAGATTTGCAT 46593
||||||||||||||
Sbjct 46228 CACAAAGATTTGCAT 46214
>seq530
Length=553347
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| | | |||||| | || || |||||||| || |||||
Sbjct 260633 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 260574
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||| | || | | ||||||||| |||||| ||| | |||
Sbjct 260573 GATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 260515
Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | ||||| |||| || || |||| ||||| || || || || || || |
Sbjct 260514 TGTCAATGGTGTCAGAGCTC---TCTACCTCCAAGGTGATAGTCTTTCCAGTGAGAGTCT 260458
Query 46578 TAACAAAGATTTGCAT 46593
| |||||||| |||||
Sbjct 260457 TCACAAAGATCTGCAT 260442
>seq980
Length=1630315
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/195 (70%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || | || ||| || | || |||||||| || || |||||
Sbjct 1975 CTCCTTCTGGATGTTGTAATCAGCTAAAGTCCGACCATCCTCGAGCTGTTTACCAGCGAA 2034
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | | ||| ||||| | || | | |||||||||| ||||| ||||| |
Sbjct 2035 GATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCCTTGACRTT 2094
Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || |||| || || || ||||| |||| || ||
Sbjct 2095 ATCGATTGTGTCTGAGCTC---TCAACCTCCAAVGTAATRGTCTTGCCTGTCAAAGTYTT 2151
Query 46579 AACAAAGATTTGCAT 46593
||||||||||||||
Sbjct 2152 CACAAAGATTTGCAT 2166
>seq507
Length=413332
Score = 86.0 bits (94), Expect = 7e-12
Identities = 151/219 (69%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||| ||||| | |||| |||||||||||| ||||| || | || || || |
Sbjct 378962 ACGAAGCACAAGATGGAGTGTAGACTCCTTTTGGATGTTGTAATCCGCAAGTGTCCGACC 378903
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || ||||| || || ||||| || | | ||||||||| | || | | |||||
Sbjct 378902 ATCTTCAAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTT 378843
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGT 46554
||| ||||| ||||| | | | |||||| |||| || || |||| ||
Sbjct 378842 GTCTTGAATCTTAGCCTTGACATTATCAATCGTGTCTGAGCTC---TCAACCTCCAAAGT 378786
Query 46555 GATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| ||||| || || || || || || || |||||
Sbjct 378785 GATGGTCTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 378747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565222580390280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |