Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1780 136 7e-27 seq400 127 4e-24 seq1311 122 2e-22 seq687 122 2e-22 seq530 122 2e-22 seq912 118 2e-21 seq507 118 2e-21 seq980 113 8e-20 seq713 113 8e-20 seq1891 109 1e-18 seq1013 105 1e-17 seq1676 95.1 2e-14 seq788 84.2 4e-11 >seq1780 Length=424430 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| ||||| || ||||| | || | ||||| || || || || Sbjct 97455 ATACCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCT 97514 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| | ||| || | ||||| || || || |||| |||||||||||| ||| Sbjct 97515 GCAAGCGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGGA 97574 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| || ||||| || || | ||| | || ||| || || ||| ||| Sbjct 97575 GGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTCTCG 97634 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| || || |||||||| || ||||| || || ||||| ||||| Sbjct 97635 ACTTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACGAATATCTGCAT 97684 >seq400 Length=13612 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| ||||| |||| ||| | || | |||||| || || ||||| Sbjct 1588 ATACCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCA 1647 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | | ||| |||| || || |||||||| || | ||||| || || ||| Sbjct 1648 GCTAGGGTACGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 1707 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| |||||||| || || || | ||| | ||| ||| || || || |||| Sbjct 1708 GGGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCA 1767 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || |||||||| || || || || ||||| |||||||| Sbjct 1768 ACCTCGAGGGTGATTGTTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || || || |||| || | || | ||||| ||||| || ||| Sbjct 2044 ATACCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCG 2103 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | ||| |||| ||||| ||||| || ||||||||||| || || ||| Sbjct 2104 GCCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGA 2163 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || || | || | ||| || || || || |||| Sbjct 2164 GGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 2223 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || || ||||| ||||| |||||||| Sbjct 2224 ACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 2273 Score = 96.9 bits (106), Expect = 6e-15 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| |||| ||| | ||| | ||| || || || Sbjct 1810 ATTTGCATACCACCACGAAGACGAAGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTG 1869 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| | | || || ||| || | || || |||||||| || | ||||| || Sbjct 1870 TAGTCAGCAAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGG 1929 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| ||||||||||| || || || || | ||| | || |||||| || || Sbjct 1930 TCCGGAGGGATTCCTTCTTTGTCCTGAATCTTTGCTTTGACGTTGTCAATAGTGTCAGAG 1989 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||||| | ||| || || || || || || || || ||||| || ||||| Sbjct 1990 CTCTCAACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045 >seq1311 Length=673479 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| |||| ||| | |||| |||||| || || ||||| Sbjct 79834 ATACCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCA 79775 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| || || | || || |||||||| || | |||||||| || ||| Sbjct 79774 GCAAGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGA 79715 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| || || || || |||| ||| | ||| ||| || || ||| |||| Sbjct 79714 GGAATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCA 79655 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || |||||||| || || || || ||||| || ||||| Sbjct 79654 ACCTCGAGGGTAATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 79605 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| || || || | ||| | ||| || || || ||||| Sbjct 79606 ATACCACCACGAAGACGAAGGACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCA 79547 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || | || || |||||||| || | ||||| || || ||| Sbjct 79546 GCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 79487 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| || || || || | ||| | || |||||| || || |||| Sbjct 79486 GGGATTCCTTCTTTGTCCTGAATCTTTGCTTTAACGTTGTCAATAGTGTCAGAGCTCTCA 79427 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | ||| || || || || || || || || ||||| || ||||| Sbjct 79426 ACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 79377 >seq687 Length=897029 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| || | || ||||| || || | ||| | ||| || || || || || Sbjct 268755 ATCCCACCACTAAGACGCAGTACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCC 268696 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | ||| || | ||| || || || || || | ||||||||| || ||| Sbjct 268695 GCAAGAGTGCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGA 268636 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||| ||||| || || | ||| | ||| ||| || || || |||| Sbjct 268635 GGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCA 268576 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||||||||| || |||||||| || || ||||| |||||||| ||||| Sbjct 268575 ACTTCTAGAGTAATGGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 268526 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||| | ||| |||| || | || | |||||| |||||| || || Sbjct 268071 ATACCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCA 268012 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | | || || | |||||| |||||||| || | |||||| || || || Sbjct 268011 GCCAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGC 267952 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| || ||||| || || | || | ||| ||| || || || || Sbjct 267951 GGGATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGCTTTCG 267892 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || |||||||| || || || || || || || || || || ||||| Sbjct 267891 ACCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 267842 Score = 100 bits (110), Expect = 5e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || || || || | || | |||||| |||||| || || | ||| || | | | Sbjct 268968 CGGAGAACAAGGTGAAGAGTCGACTCTTTCTGAATATTGTAATCTGCTAAAGTGCGACCA 268909 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||||| |||| ||||| || || ||| ||| ||||| || Sbjct 268908 TCCTCGAGCTGTTTTCCGGCAAAGATTAGCCTCTGCTGGTCCGGAACTATCCCTTCCTTG 268849 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| |||| ||| ||| ||||| || |||||| || ||||| || Sbjct 268848 TCCTGAATCTTGGCCTTTACGTTTTCAATCGTATCAGAGCTCTCAACCTCGAGAGTGATG 268789 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || | || || ||||| || ||||| Sbjct 268788 GTCTTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 268754 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || |||||||| || | ||||||||| || |||||||||||||| || ||||| || Sbjct 268215 TGCTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGGTATTCCTTCCTTGTCTTGGATC 268156 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | || || ||||| || || || || || ||||| ||||| ||| Sbjct 268155 TTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGACCTCAAGGGTTATCGTTTTCCCT 268096 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| || ||||| Sbjct 268095 GTAAGAGTCTTGACAAAGATCTGCAT 268070 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||| | ||| ||| || | | | ||| || |||||| || || Sbjct 267843 ATACCACCTCTCAACCTAAGGGCCAAGTGGAGAATTGACTCCTTTTGAATATTGTAATCA 267784 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | ||| || | |||||| |||||||| || | || || || || || Sbjct 267783 GCCAAAGTACGGCCATCCTCGAGTTGTTTACCGGCAAAGATAAGTCGTTGCTGGTCTAGA 267724 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| || | | || | ||| || || | |||| ||| Sbjct 267723 GGAATCCCTTCTTTGTCTTGGATCTGTGCCTTGACATTATTGATGGTGTAGGAACTTTCA 267664 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| ||||| ||||||| || || | || |||||||| Sbjct 267663 ACATCGAGGGTTATGGTTTTTTCTGTTAGAGTCCTTGCGAAGATTTGCAT 267614 >seq530 Length=553347 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | | || || ||||| | ||||| ||| || || || ||||| Sbjct 260215 ATACCACCACGGAGCCTGAGAACAAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCA 260156 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | |||||| ||| || || ||||||||||| || || |||||||| ||||| ||| Sbjct 260155 GCAAGAGTTCTACCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCCGGA 260096 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || |||||||| || |||| || | || ||| || || ||| ||| Sbjct 260095 GGAATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAACTCTCC 260036 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || ||||| ||||| ||||| || ||||| Sbjct 260035 ACCTCAAGAGTAATCGTCTTCCCAGTTAGGGTTTTGACAAAAATCTGCAT 259986 >seq912 Length=1276171 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| |||| ||| | || | |||||| || || ||||| Sbjct 751615 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCA 751556 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | ||| |||| || || || ||||| || | ||||| || || || Sbjct 751555 GCCAGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGT 751496 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| |||||||| || || || | ||| | ||| ||| || || || |||| Sbjct 751495 GGGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCA 751436 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||| || |||||||| || || || || ||||| |||||||| Sbjct 751435 ACCTCTAGAGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || || || |||| ||| | ||| | ||||| ||||| || || Sbjct 751159 ATACCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCA 751100 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | ||| |||| || || || || || || ||||| || || || ||| Sbjct 751099 GCCAAGGTACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGA 751040 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || || | || | ||| || || || ||| |||| Sbjct 751039 GGAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAACTCTCA 750980 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || ||||| || || ||||| ||||| | |||||| Sbjct 750979 ACCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 750930 >seq507 Length=413332 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| |||| ||| | || | |||||| ||||| ||||| Sbjct 378748 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATATTGTAGTCA 378689 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | ||| || | ||||| || || || || | |||||| || || || Sbjct 378688 GCGAGTGTACGACCATCCTCAAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGT 378629 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||||||||| || || | ||| | ||| |||||| || ||| |||| Sbjct 378628 GGGATTCCCTCTTTATCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCA 378569 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || ||||| || || | || || ||||| || ||||| Sbjct 378568 ACCTCGAGAGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 378519 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || ||||| |||| || | || | ||||| || || || ||| Sbjct 378520 ATACCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCG 378461 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | | ||| || | ||||| || ||||| || | ||| || || |||||| Sbjct 378460 GCCAAAGTACGACCATCCTCAAGCTGTTTCCCAGCAAAGATAAGTCTTTGCTGGTCAGGA 378401 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || || | || | ||| || || || || |||| Sbjct 378400 GGAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 378341 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || || ||||| || || |||||||| Sbjct 378340 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 378291 >seq980 Length=1630315 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| |||| ||| | |||| |||||| ||||| || || Sbjct 2621 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCA 2680 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | || || | || || || ||||| || | ||||| ||||| ||| Sbjct 2681 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 2740 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| |||||||| || || || | ||| | ||| ||||||||| ||| ||| Sbjct 2741 GGAATTCCCTCTTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCA 2800 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || ||||| || || | ||| || ||||| || ||||| Sbjct 2801 ACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 2850 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || | || |||| ||| | || | || || ||||| || || Sbjct 2849 ATACCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCT 2908 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | | ||| |||| ||||| || || || || |||||||| || || ||| Sbjct 2909 GCCAAGGTACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGA 2968 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || || || | || | ||| ||| || || || |||| Sbjct 2969 GGAATACCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 3028 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || || ||||| || || |||||||| Sbjct 3029 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 3078 >seq713 Length=176098 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| |||| ||| | |||| |||||| ||| || || || Sbjct 45759 ATACCACCTCTGAGACGAAGCACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCA 45700 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | || || | || || || ||||| || | ||||| ||||| ||| Sbjct 45699 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 45640 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| ||||| || || || | ||| | ||| ||||||||| ||| ||| Sbjct 45639 GGGATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCA 45580 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || ||||| || || | ||| || ||||| || ||||| Sbjct 45579 ACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 45530 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || | || |||| ||| | || | || || ||||| || || Sbjct 45531 ATACCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCT 45472 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | | ||| |||| ||||| || || || || |||||||| || || ||| Sbjct 45471 GCCAAGGTACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGA 45412 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || || || | || | ||| ||| || || || |||| Sbjct 45411 GGAATACCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 45352 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || || ||||| || || |||||||| Sbjct 45351 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 45302 >seq1891 Length=27579 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| || | || |||| ||| | ||| | || || ||||| || ||| Sbjct 11414 ATACCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCG 11473 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || | | ||| || | ||||| ||||| || || |||||||| || || ||| Sbjct 11474 GCCAAGGTACGACCATCCTCCAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGA 11533 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| ||||| || || || | || | ||| ||| || || || |||| Sbjct 11534 GGAATACCTTCCTTATCCTGAATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTCTCA 11593 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || || ||||| || || |||||||| Sbjct 11594 ACCTCGAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 11643 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | ||||| |||| ||| | |||| |||||| ||||| || || Sbjct 10958 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCA 11017 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | || || | || || || ||||| || | ||||| ||||| ||| Sbjct 11018 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 11077 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| || || || || || | ||| | ||| ||| ||||| ||| ||| Sbjct 11078 GGAATTCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATCGTATCCGAACTTTCA 11137 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || ||||| ||||| | || || ||||| || ||||| Sbjct 11138 ACCTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 11187 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || || || ||||| | |||| ||| || || || || || Sbjct 11186 ATACCACCTCTGAGACGGAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCA 11245 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || | || || || ||||| || | ||||| ||||| ||| Sbjct 11246 GCAAGGGTGCGTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 11305 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| |||||||| || || || | ||| | ||| ||||||||| ||| ||| Sbjct 11306 GGAATTCCCTCTTTATCCTGAATCTTAGCTTTCACATTATCAATAGTATCAGAACTTTCA 11365 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | ||| || ||||| || || | ||| || ||||| || ||||| Sbjct 11366 ACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 11415 >seq1013 Length=1118043 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 ||| ||||||| || || |||| ||| | || | ||||| || || || || | Sbjct 384608 ACCTCCTCTCAGACGTAGCACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGC 384667 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | ||||| || || |||||||||||||| || || || | || ||||| || || Sbjct 384668 GAGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGG 384727 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 |||||||| || ||||| || || | ||| | ||| || || || || || ||||| Sbjct 384728 GATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAAC 384787 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 |||| ||||| || || || ||||| ||||| || || || |||||||| Sbjct 384788 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 384838 >seq1676 Length=2083552 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| || || || | ||| | |||||| ||| | || || Sbjct 1910462 ATACCACCGCGAAGACGAAGGACAAGGTGAAGTGTTGACTCTTTCTGGATACTGTAATCC 1910403 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || | ||| || || ||||| || | ||||| || |||||| Sbjct 1910402 GCAAGAGTACGGCCATCCTCGAGTTGCTTACCTGCAAAGATCAGCCTCTGCTGGTCAGGA 1910343 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||||||||| || |||| || | || ||| || || || || Sbjct 1910342 GGGATTCCTTCTTTATCTTGGATCTTGGCCTTGACGTTGTCAATTGTGTCTGAGCTTTCG 1910283 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || |||||||| || || || || || || || ||||| |||||||| Sbjct 1910282 ACCTCAAGAGTTATGGTCTTTCCCGTAAGAGTCTTCACAAAGATTTGCAT 1910233 >seq788 Length=1574065 Score = 84.2 bits (92), Expect = 4e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || || ||||||||||| || || || ||||| || || ||||| || ||||| || Sbjct 108408 ATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTT 108349 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||| || || |||| || | || |||||| || ||| ||| || || | || || Sbjct 108348 ATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACCTCCAAGGTGAT 108289 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| || ||||| Sbjct 108288 GGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899629220922480