Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1780 136 7e-27
seq400 127 4e-24
seq1311 122 2e-22
seq687 122 2e-22
seq530 122 2e-22
seq912 118 2e-21
seq507 118 2e-21
seq980 113 8e-20
seq713 113 8e-20
seq1891 109 1e-18
seq1013 105 1e-17
seq1676 95.1 2e-14
seq788 84.2 4e-11
>seq1780
Length=424430
Score = 136 bits (150), Expect = 7e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| ||||| || ||||| | || | ||||| || || || ||
Sbjct 97455 ATACCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCT 97514
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| | ||| || | ||||| || || || |||| |||||||||||| |||
Sbjct 97515 GCAAGCGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGGA 97574
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || ||||| || || | ||| | || ||| || || ||| |||
Sbjct 97575 GGGATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTCTCG 97634
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| || || |||||||| || ||||| || || ||||| |||||
Sbjct 97635 ACTTCTAGGGTAATGGTTTTACCGGTAAGCGTCTTGACGAATATCTGCAT 97684
>seq400
Length=13612
Score = 127 bits (140), Expect = 4e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||||| ||||| |||| ||| | || | |||||| || || |||||
Sbjct 1588 ATACCACCTCTCAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCA 1647
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| |||| || || |||||||| || | ||||| || || |||
Sbjct 1648 GCTAGGGTACGACCATCCTCTAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 1707
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| |||||||| || || || | ||| | ||| ||| || || || ||||
Sbjct 1708 GGGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCA 1767
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || |||||||| || || || || ||||| ||||||||
Sbjct 1768 ACCTCGAGGGTGATTGTTTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 1817
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || || || |||| || | || | ||||| ||||| || |||
Sbjct 2044 ATACCACCTCTTAAACGGAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCG 2103
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | ||| |||| ||||| ||||| || ||||||||||| || || |||
Sbjct 2104 GCCAAGGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGA 2163
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| || || || || ||||
Sbjct 2164 GGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 2223
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| ||||| ||||||||
Sbjct 2224 ACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 2273
Score = 96.9 bits (106), Expect = 6e-15
Identities = 163/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | ||||| |||| ||| | ||| | ||| || || ||
Sbjct 1810 ATTTGCATACCACCACGAAGACGAAGCACCAAATGAAGTGTCGACTCCTTCTGGATGTTG 1869
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| | | || || ||| || | || || |||||||| || | ||||| ||
Sbjct 1870 TAGTCAGCAAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGG 1929
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| ||||||||||| || || || || | ||| | || |||||| || ||
Sbjct 1930 TCCGGAGGGATTCCTTCTTTGTCCTGAATCTTTGCTTTGACGTTGTCAATAGTGTCAGAG 1989
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||||| | ||| || || || || || || || || ||||| || |||||
Sbjct 1990 CTCTCAACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 2045
>seq1311
Length=673479
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| || || |||||
Sbjct 79834 ATACCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCA 79775
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| || || | || || |||||||| || | |||||||| || |||
Sbjct 79774 GCAAGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGA 79715
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || || || || |||| ||| | ||| ||| || || ||| ||||
Sbjct 79714 GGAATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCA 79655
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || |||||||| || || || || ||||| || |||||
Sbjct 79654 ACCTCGAGGGTAATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 79605
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| || || || | ||| | ||| || || || |||||
Sbjct 79606 ATACCACCACGAAGACGAAGGACAAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCA 79547
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | ||||| ||| || | || || |||||||| || | ||||| || || |||
Sbjct 79546 GCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA 79487
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||| || || || || | ||| | || |||||| || || ||||
Sbjct 79486 GGGATTCCTTCTTTGTCCTGAATCTTTGCTTTAACGTTGTCAATAGTGTCAGAGCTCTCA 79427
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| | ||| || || || || || || || || ||||| || |||||
Sbjct 79426 ACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCTTGACAAAGATCTGCAT 79377
>seq687
Length=897029
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| ||||| || | || ||||| || || | ||| | ||| || || || || ||
Sbjct 268755 ATCCCACCACTAAGACGCAGTACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCC 268696
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| || | ||| || || || || || | ||||||||| || |||
Sbjct 268695 GCAAGAGTGCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGA 268636
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||| ||||| || || | ||| | ||| ||| || || || ||||
Sbjct 268635 GGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCA 268576
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||||||||| || |||||||| || || ||||| |||||||| |||||
Sbjct 268575 ACTTCTAGAGTAATGGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 268526
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||| | ||| |||| || | || | |||||| |||||| || ||
Sbjct 268071 ATACCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCA 268012
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | || || | |||||| |||||||| || | |||||| || || ||
Sbjct 268011 GCCAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGC 267952
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || ||||| || || | || | ||| ||| || || || ||
Sbjct 267951 GGGATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGCTTTCG 267892
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || |||||||| || || || || || || || || || || |||||
Sbjct 267891 ACCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 267842
Score = 100 bits (110), Expect = 5e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || || || || | || | |||||| |||||| || || | ||| || | | |
Sbjct 268968 CGGAGAACAAGGTGAAGAGTCGACTCTTTCTGAATATTGTAATCTGCTAAAGTGCGACCA 268909
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | |||||||||||||| |||| ||||| || || ||| ||| ||||| ||
Sbjct 268908 TCCTCGAGCTGTTTTCCGGCAAAGATTAGCCTCTGCTGGTCCGGAACTATCCCTTCCTTG 268849
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
|| || || |||| |||| ||| ||| ||||| || |||||| || ||||| ||
Sbjct 268848 TCCTGAATCTTGGCCTTTACGTTTTCAATCGTATCAGAGCTCTCAACCTCGAGAGTGATG 268789
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || | || || ||||| || |||||
Sbjct 268788 GTCTTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 268754
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
|| || |||||||| || | ||||||||| || |||||||||||||| || ||||| ||
Sbjct 268215 TGCTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGGTATTCCTTCCTTGTCTTGGATC 268156
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| || | || || ||||| || || || || || ||||| ||||| |||
Sbjct 268155 TTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGACCTCAAGGGTTATCGTTTTCCCT 268096
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || ||||| || |||||
Sbjct 268095 GTAAGAGTCTTGACAAAGATCTGCAT 268070
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||||||||| | ||| ||| || | | | ||| || |||||| || ||
Sbjct 267843 ATACCACCTCTCAACCTAAGGGCCAAGTGGAGAATTGACTCCTTTTGAATATTGTAATCA 267784
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | ||| || | |||||| |||||||| || | || || || || ||
Sbjct 267783 GCCAAAGTACGGCCATCCTCGAGTTGTTTACCGGCAAAGATAAGTCGTTGCTGGTCTAGA 267724
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| ||||| || | | || | ||| || || | |||| |||
Sbjct 267723 GGAATCCCTTCTTTGTCTTGGATCTGTGCCTTGACATTATTGATGGTGTAGGAACTTTCA 267664
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || ||||| ||||| ||||||| || || | || ||||||||
Sbjct 267663 ACATCGAGGGTTATGGTTTTTTCTGTTAGAGTCCTTGCGAAGATTTGCAT 267614
>seq530
Length=553347
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | | || || ||||| | ||||| ||| || || || |||||
Sbjct 260215 ATACCACCACGGAGCCTGAGAACAAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCA 260156
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | |||||| ||| || || ||||||||||| || || |||||||| ||||| |||
Sbjct 260155 GCAAGAGTTCTACCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCCGGA 260096
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || |||||||| || |||| || | || ||| || || ||| |||
Sbjct 260095 GGAATACCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAACTCTCC 260036
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || ||||| ||||| ||||| || |||||
Sbjct 260035 ACCTCAAGAGTAATCGTCTTCCCAGTTAGGGTTTTGACAAAAATCTGCAT 259986
>seq912
Length=1276171
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | || | |||||| || || |||||
Sbjct 751615 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCA 751556
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| |||| || || || ||||| || | ||||| || || ||
Sbjct 751555 GCCAGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGT 751496
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| |||||||| || || || | ||| | ||| ||| || || || ||||
Sbjct 751495 GGGATTCCCTCTTTATCCTGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCA 751436
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||| || |||||||| || || || || ||||| ||||||||
Sbjct 751435 ACCTCTAGAGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || || || |||| ||| | ||| | ||||| ||||| || ||
Sbjct 751159 ATACCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCA 751100
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | ||| |||| || || || || || || ||||| || || || |||
Sbjct 751099 GCCAAGGTACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGA 751040
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| || || || ||| ||||
Sbjct 751039 GGAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAACTCTCA 750980
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || ||||| || || ||||| ||||| | ||||||
Sbjct 750979 ACCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 750930
>seq507
Length=413332
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | || | |||||| ||||| |||||
Sbjct 378748 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTGGACTCTTTCTGGATATTGTAGTCA 378689
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | ||| || | ||||| || || || || | |||||| || || ||
Sbjct 378688 GCGAGTGTACGACCATCCTCAAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGT 378629
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| ||||||||||| || || | ||| | ||| |||||| || ||| ||||
Sbjct 378628 GGGATTCCCTCTTTATCTTGGATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCA 378569
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || ||||| || || | || || ||||| || |||||
Sbjct 378568 ACCTCGAGAGTGATTGTTTTGCCAGTCAAAGTCTTCACAAAGATCTGCAT 378519
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || ||||| |||| || | || | ||||| || || || |||
Sbjct 378520 ATACCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCG 378461
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| || | ||||| || ||||| || | ||| || || ||||||
Sbjct 378460 GCCAAAGTACGACCATCCTCAAGCTGTTTCCCAGCAAAGATAAGTCTTTGCTGGTCAGGA 378401
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || || || || || | || | ||| || || || || ||||
Sbjct 378400 GGAATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCA 378341
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| || || ||||||||
Sbjct 378340 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 378291
>seq980
Length=1630315
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| ||||| || ||
Sbjct 2621 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCA 2680
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | || || | || || || ||||| || | ||||| ||||| |||
Sbjct 2681 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 2740
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| |||||||| || || || | ||| | ||| ||||||||| ||| |||
Sbjct 2741 GGAATTCCCTCTTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCA 2800
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||| || ||||| || || | ||| || ||||| || |||||
Sbjct 2801 ACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 2850
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || | || |||| ||| | || | || || ||||| || ||
Sbjct 2849 ATACCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCT 2908
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| |||| ||||| || || || || |||||||| || || |||
Sbjct 2909 GCCAAGGTACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGA 2968
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || || | || | ||| ||| || || || ||||
Sbjct 2969 GGAATACCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 3028
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| || || ||||||||
Sbjct 3029 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 3078
>seq713
Length=176098
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| ||| || || ||
Sbjct 45759 ATACCACCTCTGAGACGAAGCACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCA 45700
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | || || | || || || ||||| || | ||||| ||||| |||
Sbjct 45699 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 45640
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| ||||| || || || | ||| | ||| ||||||||| ||| |||
Sbjct 45639 GGGATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCA 45580
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||| || ||||| || || | ||| || ||||| || |||||
Sbjct 45579 ACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 45530
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || | || |||| ||| | || | || || ||||| || ||
Sbjct 45531 ATACCACCTCTTAACCTGAGAACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCT 45472
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| |||| ||||| || || || || |||||||| || || |||
Sbjct 45471 GCCAAGGTACGACCATCTTCTAGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGA 45412
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || || | || | ||| ||| || || || ||||
Sbjct 45411 GGAATACCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCA 45352
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| || || ||||||||
Sbjct 45351 ACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 45302
>seq1891
Length=27579
Score = 109 bits (120), Expect = 1e-18
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| || | || |||| ||| | ||| | || || ||||| || |||
Sbjct 11414 ATACCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCG 11473
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || | | ||| || | ||||| ||||| || || |||||||| || || |||
Sbjct 11474 GCCAAGGTACGACCATCCTCCAGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGA 11533
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| ||||| || || || | || | ||| ||| || || || ||||
Sbjct 11534 GGAATACCTTCCTTATCCTGAATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTCTCA 11593
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || ||||| || || || || || || ||||| || || ||||||||
Sbjct 11594 ACCTCGAGAGTAATGGTCTTGCCAGTAAGTGTTTTCACGAAAATTTGCAT 11643
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | ||||| |||| ||| | |||| |||||| ||||| || ||
Sbjct 10958 ATACCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCA 11017
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | | || || | || || || ||||| || | ||||| ||||| |||
Sbjct 11018 GCGAGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 11077
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| || || || || || | ||| | ||| ||| ||||| ||| |||
Sbjct 11078 GGAATTCCTTCCTTGTCCTGAATCTTAGCTTTAACATTGTCAATCGTATCCGAACTTTCA 11137
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||| || ||||| ||||| | || || ||||| || |||||
Sbjct 11138 ACCTCCAAAGTAATGGTTTTCCCTGTCAATGTCTTCACAAAGATCTGCAT 11187
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | || || || ||||| | |||| ||| || || || || ||
Sbjct 11186 ATACCACCTCTGAGACGGAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCA 11245
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | ||| || | || || || ||||| || | ||||| ||||| |||
Sbjct 11246 GCAAGGGTGCGTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGA 11305
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||| |||||||| || || || | ||| | ||| ||||||||| ||| |||
Sbjct 11306 GGAATTCCCTCTTTATCCTGAATCTTAGCTTTCACATTATCAATAGTATCAGAACTTTCA 11365
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | ||| || ||||| || || | ||| || ||||| || |||||
Sbjct 11366 ACCTCCAAAGTGATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 11415
>seq1013
Length=1118043
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||| ||||||| || || |||| ||| | || | ||||| || || || || |
Sbjct 384608 ACCTCCTCTCAGACGTAGCACCAAATGAAGCGTCGATTCTTTCTGGATGTTGTAATCAGC 384667
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
| ||||| || || |||||||||||||| || || || | || ||||| || ||
Sbjct 384668 GAGTGTTCTTCCGTCTTCCAATTGTTTTCCGGCGAAGATCAACCGTTGCTGATCCGGTGG 384727
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|||||||| || ||||| || || | ||| | ||| || || || || || |||||
Sbjct 384728 GATTCCTTCCTTGTCTTGAATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAAC 384787
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|||| ||||| || || || ||||| ||||| || || || ||||||||
Sbjct 384788 CTCTAAGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 384838
>seq1676
Length=2083552
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| || || || | ||| | |||||| ||| | || ||
Sbjct 1910462 ATACCACCGCGAAGACGAAGGACAAGGTGAAGTGTTGACTCTTTCTGGATACTGTAATCC 1910403
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| | || | ||| || | ||| || || ||||| || | ||||| || ||||||
Sbjct 1910402 GCAAGAGTACGGCCATCCTCGAGTTGCTTACCTGCAAAGATCAGCCTCTGCTGGTCAGGA 1910343
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| ||||||||||||||||| || |||| || | || ||| || || || ||
Sbjct 1910342 GGGATTCCTTCTTTATCTTGGATCTTGGCCTTGACGTTGTCAATTGTGTCTGAGCTTTCG 1910283
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || |||||||| || || || || || || || ||||| ||||||||
Sbjct 1910282 ACCTCAAGAGTTATGGTCTTTCCCGTAAGAGTCTTCACAAAGATTTGCAT 1910233
>seq788
Length=1574065
Score = 84.2 bits (92), Expect = 4e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264
||| || || ||||||||||| || || || ||||| || || ||||| || ||||| ||
Sbjct 108408 ATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTT 108349
Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324
||| || || |||| || | || |||||| || ||| ||| || || | || ||
Sbjct 108348 ATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACCTCCAAGGTGAT 108289
Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || ||||| || |||||
Sbjct 108288 GGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899629220922480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |