Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq960 84.2 8e-12 >seq960 Length=17752 Score = 84.2 bits (92), Expect = 8e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||| ||||| | ||||||||||||| | |||| ||| ||| ||||| |||||||||| || Sbjct 658 GTTACGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATCAGCCTTGCGAGCTACCAAA 717 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 718 CTGCTCTACCCCGC 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181598371511418