Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 107 2e-18
>seq1127
Length=645582
Score = 107 bits (118), Expect = 2e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 158808 GACGGCGATCAAGTTATTCAGTGTGAGTCCGATCAGTACATTCTAGACGCTGCAGAAGAG 158867
|| || || |||| ||| ||||||| ||| ||| |||| ||||| || || ||
Sbjct 574069 GAAGGTGAGCAAGAGATTGAGTGTGACGACGACGTTTACGTTCTTGACGCGGCCGAGGAA 574010
Query 158868 GCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGTGCCTGTTCTTCCTGTGCTGGTAAA 158927
|| ||| | ||| | || || || ||||||||| | ||||| |||||||||||||
Sbjct 574009 GCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAAA 573950
Query 158928 CTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCATTCTTGGATGATGATCAGATTGCA 158987
|||| ||| ||||||| || || || ||| | |||||||| |||||||
Sbjct 573949 GTTGTGTCTGGATCTGTTGATCAGTCTGACCAAAGTTTCCTTGATGATGAACAGATTGGT 573890
Query 158988 GAAGGATTTATCCTTACGTGTGTATCTTATCCCACTTCTGAT 159029
||||| ||| | || || |||| ||||||| |||||||||
Sbjct 573889 GAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACTTCTGAT 573848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 573007962490800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |