Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 95.1 1e-14
>seq1127
Length=645582
Score = 95.1 bits (104), Expect = 1e-14
Identities = 131/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 179485 CTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTTGT 179544
|||||||| || || ||||| || | ||| | |||||||| ||||||||| |||||
Sbjct 574027 CTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGTTCTTGT 573968
Query 179545 TCATCTTGTGCTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGCGATCAATCGTTTTTG 179604
|| |||||||||||| | | | ||||||||||||||| || ||| || |
Sbjct 573967 TCGAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTGATCAGTCTGACCAAAGTTTCCTT 573908
Query 179605 GATGACGATCAAAT-GGAGTCGGGATTTATTCTGACTTGCGTATCTTATCCTACTAGTGA 179663
||||| || || || || | ||| ||| |||| ||||| | ||||||||||| |||
Sbjct 573907 GATGATGAACAGATTGGTGAAGGG-TTTGTTCTCACTTGTGCTGCTTATCCTACTTCTGA 573849
Query 179664 T 179664
|
Sbjct 573848 T 573848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614600398389920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |