Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 109 7e-19
>seq1127
Length=645582
Score = 109 bits (120), Expect = 7e-19
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 176352 CTTGACGCTGCTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTTGT 176411
|||||||| || || ||||| || | ||| | |||||||| ||||||||| |||||
Sbjct 574027 CTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCATACTCTTGCCGTGCTGGTTCTTGT 573968
Query 176412 TCATCTTGTGCTGGCAAACTAGAGAGTGGTTCTGTTGATCAGAGTGATCAGTCTTTCCTG 176471
|| |||||||| ||| | | | ||| |||||||||||| ||| || ||||||
Sbjct 573967 TCGAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTGATCAGTCTGACCAAAGTTTCCTT 573908
Query 176472 GATGATGATCAAATTGAATCTGGTTTTATTCTGACTTGCGTATCTTATCCTACTAGTGAT 176531
|||||||| || |||| || ||| |||| ||||| | ||||||||||| ||||
Sbjct 573907 GATGATGAACAGATTGGTGAAGGGTTTGTTCTCACTTGTGCTGCTTATCCTACTTCTGAT 573848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605992639306320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |