Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq912 118 9e-22 seq507 113 4e-20 seq788 105 6e-18 seq980 98.7 8e-16 seq400 98.7 8e-16 seq530 96.9 3e-15 seq713 95.1 1e-14 seq1891 91.5 1e-13 seq1206 91.5 1e-13 seq687 91.5 1e-13 seq1676 89.7 4e-13 seq1311 86.0 5e-12 seq1780 82.4 6e-11 >seq912 Length=1276171 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || |||||||| || |||||||| || |||| | || || Sbjct 751594 ACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCCAGTGTGCGACCATCCTCT 751535 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| || | || || | ||| || ||||| || | ||||||||||| Sbjct 751534 AGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCCTGA 751475 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | ||||||| | ||||| |||||||| || | ||| Sbjct 751474 ATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCTAGAGTGATTGTTTTA 751415 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| ||||| |||||||||||||||||| Sbjct 751414 CCCGTGAGAGTCTTCACAAAGATTTGCATA 751385 >seq507 Length=413332 Score = 113 bits (124), Expect = 4e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | || || ||||| || ||||||||||| || ||| || | || || Sbjct 378727 ACCAAATGGAGGGTGGACTCTTTCTGGATATTGTAGTCAGCGAGTGTA-CGACCATCCTC 378669 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || ||| | || || | ||| || ||||| || | ||||||||||| Sbjct 378668 AAGCTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCCGGTGGGATTCCCTCTTTATCTTG 378609 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| ||| | | || | |||||||| ||||| || ||||| || | ||| Sbjct 378608 GATCTTAGCTTTAACATTGTCAATAGTGTCTGAACTCTCAACCTCGAGAGTGATTGTTTT 378549 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| ||| ||||||||||| |||||| Sbjct 378548 GCCAGTCAAAGTCTTCACAAAGATCTGCATA 378518 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||| || | || || || || || || ||||| || | || | | || | || || Sbjct 379411 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATC-CGCAAGAGTCCGACCATCCTC 379353 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || ||| | ||||| | |||||| ||||| || | || || || || Sbjct 379352 AAGCTGTTTCCCAGCGAATATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTG 379293 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | | || | |||||||| | ||||| || || || |||| || Sbjct 379292 AATCTTGGCCTTGACGTTATCAATAGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCTT 379233 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| ||| |||||||||||||||||| Sbjct 379232 GCCTGTCAAAGTCTTCACAAAGATTTGCATA 379202 >seq788 Length=1574065 Score = 105 bits (116), Expect = 6e-18 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || ||||| ||||||||||| || | |||| | || || Sbjct 108917 ACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTCA 108858 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || ||| | ||||||||||| || ||||| || | ||| || || || | Sbjct 108857 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 108798 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || || || || || || | || Sbjct 108797 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTTC 108738 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||||||| ||||| || | |||||| Sbjct 108737 CCGGTCAGAGTCTTCACGAAARTCTGCATA 108708 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| |||| || || |||||||| | ||||| || || ||||| |||||||| || Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| || || || |||||| | || | | ||| || ||||| || Sbjct 100755 AAAGTTCTGC-CGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 100697 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || ||||||| ||| | | || | ||||| | | || || Sbjct 100696 AATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCAC 100637 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| || || || |||||||||||| Sbjct 100636 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 100588 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| |||| || || |||||||| | ||||| || || ||||| |||||||| || Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| || ||||||| || || || |||||| | || | | ||| || ||||| || Sbjct 108191 AAAGTTCTGC-CGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 108133 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||||||| || ||||||| ||| | | || | ||||| | | || || Sbjct 108132 AATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCYAC 108073 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| |||| || || |||| || || || |||||||||||| Sbjct 108072 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 108024 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || |||||||| || | ||| | || || Sbjct 108689 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGCCCATCCTCA 108630 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 |||||||| || ||| | ||||||||||| || ||||| || | || || || || | Sbjct 108629 AGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 108570 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || ||||| ||||| || | ||| Sbjct 108569 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATCGTCTTG 108510 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || |||| ||| || || ||||| |||||| || Sbjct 108509 CCAGTCAAAGTCTTGACGAAGATCTGCATACCT 108477 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || |||||||| ||| | || ||| | || || Sbjct 693784 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCTAAGGT-GCGGCCATCCTC 693726 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||| || ||| | ||||||||||| || ||||| || | || || || || Sbjct 693725 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTG 693666 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| |||| | || | ||||||| | || ||||| || || || | || Sbjct 693665 GATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACTTCAAGGGTGATGGTCTT 693606 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || |||||||| |||||| Sbjct 693605 ACCGGTCAAAGTCTTGACAAAGATCTGCATA 693575 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||||||| || | || | || ||| Sbjct 694012 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAAGTACGACCATCCTCG 693953 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | ||| || ||||| | Sbjct 693952 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTGG 693893 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| || | | | || | ||||| | | || || || || || |||| || Sbjct 693892 ATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAGTGTGATAGTCTTC 693833 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| ||||| || || ||||| Sbjct 693832 CCGGTCAGAGTCTTCACGAAAATCTGCAT 693804 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || |||||||| || | || | || || Sbjct 101253 ACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTACGACCATCCTCA 101194 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | ||| || || || | Sbjct 101193 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 101134 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | | || | ||||| | | || ||||| || || || | || Sbjct 101133 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACTTCAAGGGTGATGGTCTTT 101074 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || |||| ||| ||||| || || |||||| || Sbjct 101073 CCGGTCAAAGTCTTCACGAAAATCTGCATACCT 101041 >seq980 Length=1630315 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| ||||| || |||||||| || || ||| ||| |||| || Sbjct 2642 ACCAAATGGAGGGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGT-GCGACCGTCCTC 2700 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| ||||| || | || || | ||| |||||||| || | ||||||||||| Sbjct 2701 AAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGAATTCCCTCTTTATCCTG 2760 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| ||| | | || | ||| || | |||||| || | ||| || | ||| Sbjct 2761 AATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTT 2820 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| || |||||||| || |||||| Sbjct 2821 GCCAGTCAACGTCTTCACAAAAATCTGCATA 2851 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || ||||| || ||| | || || | || || Sbjct 1958 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTC-CGACCATCCTC 2016 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||||||| ||| | ||||| | |||||| || || || | ||||| || || Sbjct 2017 GAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTG 2076 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| || | | || | ||||||| | ||||| || | || || | || Sbjct 2077 AATCTTAGCCTTGACRTTATCGATTGTGTCTGAGCTCTCAACCTCCAAVGTAATRGTCTT 2136 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||| |||| ||| ||||||||||||||||| Sbjct 2137 GCCTGTCAAAGTYTTCACAAAGATTTGCAT 2166 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||||| ||| || || || || |||||||| || || | | || | ||||| Sbjct 2870 ACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCT 2929 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| ||| | || | | ||| || || || || | ||| || ||||| Sbjct 2930 AGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGA 2989 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | ||||| | | ||||| || ||||| || | ||| Sbjct 2990 ATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTG 3049 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||||||| || |||||||| Sbjct 3050 CCAGTGAGTGTTTTCACGAAAATTTGCAT 3078 >seq400 Length=13612 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | || || ||||| || || |||||||| ||| | | | || | || || Sbjct 1609 ACCAAATGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGCT-AGGGTACGACCATCCTC 1667 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| |||||||| | || || | ||| || ||||| || | ||||||||||| Sbjct 1668 TAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCCTCTTTATCCTG 1727 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| ||| | | || | ||||||| | ||||| || || || || | ||| Sbjct 1728 AATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTCTCAACCTCGAGGGTGATTGTTTT 1787 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || ||||| || ||||||||||||||| Sbjct 1788 ACCAGTGAGAGTCTTGACAAAGATTTGCATA 1818 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || ||||| || |||||||| ||| || | | || | ||||| Sbjct 2065 ACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCCAAGGTACGGCCATCTTCT 2124 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||||||| | || | | ||| || ||||| || | || || || || Sbjct 2125 AGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGA 2184 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | ||||| | | ||||| || ||||| || | ||| Sbjct 2185 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTG 2244 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||||||||||||||||||| Sbjct 2245 CCAGTGAGTGTTTTCACAAAGATTTGCAT 2273 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || |||||||| || ||| | ||||| | ||| |||||||| || | || || || Sbjct 1207 TCCTCAAGCTGTTTTCCAGCGAAGATGAGTCTCTGCTGATCCGGAGGGATCCCTTCCTTG 1266 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| || | | | || | ||||||| | ||||| || | || ||| Sbjct 1267 TCCTGGATCTTAGCCTTGACGTTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATA 1326 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||||| |||| |||||||||||||||||||||| Sbjct 1327 GTCTTGCCTGTCAAAGTTTTCACAAAGATTTGCATA 1362 >seq530 Length=553347 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || |||||||| || |||| | || || Sbjct 260650 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCA 260591 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | ||| || || || | Sbjct 260590 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 260531 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | ||||| | | || || || | || |||| || Sbjct 260530 ATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATAGTCTTT 260471 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || || ||||| ||||||||||| |||||| || Sbjct 260470 CCAGTGAGAGTCTTCACAAAGATCTGCATACCT 260438 >seq713 Length=176098 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| ||||||||||| ||||| || || || |||| |||| || Sbjct 45738 ACCAAATGAAGGGTAGACTCTTTTTGAATGTTGTAATCAGCGAGTG-TGCGACCGTCCTC 45680 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| ||||| || | || || | ||| |||||||| || | || || ||||| Sbjct 45679 AAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 45620 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| ||| | | || | ||| || | |||||| || | ||| || | ||| Sbjct 45619 AATCTTAGCTTTAACATTATCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTT 45560 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| || |||||||| || |||||| Sbjct 45559 GCCAGTCAACGTCTTCACAAAAATCTGCATA 45529 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || ||||| || ||| | || || | || || Sbjct 46422 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTC-CGACCATCCTC 46364 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||||||| ||| | ||||| | |||||| || || || | ||||| || || Sbjct 46363 GAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTG 46304 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| || | | || | ||||||| | ||||| || | || || | || Sbjct 46303 AATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAAMGTAATGGTCTT 46244 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| |||||||||||||||||||||| Sbjct 46243 GCCTGTCAAAGTTTTCACAAAGATTTGCATA 46213 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||||| ||| || || || || |||||||| || || | | || | ||||| Sbjct 45510 ACCAAATGTAGCGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCT 45451 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||| ||| | || | | ||| || || || || | ||| || ||||| Sbjct 45450 AGCTGTTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGAATACCTTCCTTATCCTGA 45391 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | ||||| | | ||||| || ||||| || | ||| Sbjct 45390 ATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTG 45331 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || |||||||| || |||||||| Sbjct 45330 CCAGTGAGTGTTTTCACGAAAATTTGCAT 45302 >seq1891 Length=27579 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || ||||| || ||||| || | | |||| | ||||| ||||| ||||| Sbjct 11219 GTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCAAGCTGCTTACCA 11278 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | ||| |||||||| || | ||||||||||| ||||| |||| Sbjct 11279 GCAAAGATAAGCCTCTGCTGATCCGGAGGAATTCCCTCTTTATCCTGAATCTTAGCTTTC 11338 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||| || | |||||| || | ||| || | |||||| |||| || Sbjct 11339 ACATTATCAATAGTATCAGAACTTTCAACCTCCAAAGTGATGGTTTTGCCAGTCAACGTC 11398 Query 27231 TTCACAAAGATTTGCATA 27248 |||||||| || |||||| Sbjct 11399 TTCACAAAAATCTGCATA 11416 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || ||||| || ||| | || || | || || Sbjct 10295 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTC-CGACCATCCTC 10353 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||||||||| ||| | ||||| | |||||| || || || | ||||| || || Sbjct 10354 GAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTG 10413 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||| || | | || | ||||||| | ||||| || | || || | || Sbjct 10414 AATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTT 10473 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| |||| |||||||||||||||||||||| Sbjct 10474 GCCTGTCAAAGTTTTCACAAAGATTTGCATA 10504 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || || || |||||||| ||| || | | || | || || Sbjct 11435 ACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTACGACCATCCTCC 11494 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||||||| | || | | ||| || ||||| || | ||| || ||||| Sbjct 11495 AGCTGTTTACCGGCGAAGATCAATCTCTGCTGGTCCGGAGGAATACCTTCCTTATCCTGA 11554 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | ||||| | | ||||| || ||||| || | ||| Sbjct 11555 ATCTTTGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTG 11614 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAAAA 27259 || || || |||||||| || |||||||| ||| ||||| Sbjct 11615 CCAGTAAGTGTTTTCACGAAAATTTGCAT--CTGGAAAAAA 11653 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/216 (68%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | || | ||||| || || || || ||||| || || | || | Sbjct 10517 CGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGTCCA 10576 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || |||||||| || ||| | ||||| | |||||| || || || | |||||||| Sbjct 10577 TCYTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGTTGGTCTGGTGGAATCCCCTCTTTG 10636 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||| || | | || | ||||||| | ||||| || ||||| || Sbjct 10637 TCCTGAATCTTAGCCTTGACRTTATCGATTGTGTCTGAGCTCTCAACCTCCAGAGTAATG 10696 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | ||| || || || || ||||||||||| |||||| Sbjct 10697 GTTTTCCCGGTAAGGGTCTTCACAAAGATCTGCATA 10732 >seq1206 Length=1516661 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||| ||| | | | || ||||||||||||| || || Sbjct 451400 CGTTGATTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCC 451459 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| |||| | ||||| || ||||| || | ||| || || || ||||||| || Sbjct 451460 GGCGAAAATCAATCGCTGCTGGTCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTT 451519 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | || | ||||| | || || || || ||||| || | || ||||| || || Sbjct 451520 GACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGAGTGATCGTCTTCCCCGTTAGGGT 451579 Query 27230 TTTCACAAAGATTTGCAT 27247 |||||| ||||| ||||| Sbjct 451580 TTTCACGAAGATCTGCAT 451597 >seq687 Length=897029 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||||| | ||||| || | || || ||||||||||||||||| || | Sbjct 268068 CCACCTCTCAACCTAAGAACCAAGTGAAGGGTTGACTCTTTTTGAATATTGTAATCAGCC 268009 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || |||| || || ||||||||||| | || || | ||| || |||||||| Sbjct 268008 AAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCGGG 267949 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| || | | || | ||||| | | ||| || Sbjct 267948 ATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGCTTTCGACC 267889 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||||||| | ||||| || ||||| || || ||||| |||||| Sbjct 267888 TCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCATA 267841 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTC 27091 |||| ||| | || | || || || ||||| || ||||| || | || | |||| | Sbjct 268740 CGCAGTACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATC-CGCAAGAGTGCGACC 268682 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 || || || || || || ||| | || || | |||||| ||||| || | || ||||| Sbjct 268681 ATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTT 268622 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || ||||| ||||| | || | ||||||| | |||||||||||||| || Sbjct 268621 GTCTTGAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAAT 268562 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || || |||||||||||||| || ||||| Sbjct 268561 GGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 268526 >seq1676 Length=2083552 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||| || ||| |||| || | || | | || | || ||||| || ||||| Sbjct 1910429 GTTGACTCTTTCTGGATACTGTAATC-CGCAAGAGTACGGCCATCCTCGAGTTGCTTACC 1910371 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || | || || | ||| || || || || | || |||||||| ||||||| || Sbjct 1910370 TGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTT 1910311 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||||| | ||| || || |||||||| | || ||||| ||||| Sbjct 1910310 GACGTTGTCAATTGTGTCTGAGCTTTCGACCTCAAGAGTTATGGTCTTTCCCGTAAGAGT 1910251 Query 27230 TTTCACAAAGATTTGCAT 27247 ||||||||||||||||| Sbjct 1910250 CTTCACAAAGATTTGCAT 1910233 >seq1311 Length=673479 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | ||||| ||||| || || |||||||| || ||| | |||| || Sbjct 79813 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTC-CGTCCTC 79755 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| |||||||| | || || | |||||| ||||| || | || || || || Sbjct 79754 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 79695 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| ||| | | || | ||||| | ||||| || || || || | ||| Sbjct 79694 GATCTTGGCTTTGACATTATCAATGGTGTCCGAACTCTCAACCTCGAGGGTAATGGTTTT 79635 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || ||||||||||| |||||| Sbjct 79634 ACCAGTGAGGGTCTTCACAAAGATCTGCATA 79604 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || |||| ||||| || | || | ||||| || || ||||| ||||| || ||| Sbjct 80059 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 80000 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || || | || || ||||||||||| ||| | ||||| | |||||| || || || Sbjct 79999 AAAGTC-CGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 79941 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || || || ||||| || | | || | ||||||| | || || Sbjct 79940 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCCAC 79881 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | |||||| | ||||| || || || ||||||||||| |||||| Sbjct 79880 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 79832 >seq1780 Length=424430 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || |||||||| || ||||| || || ||| || | || |||||||||||||| Sbjct 97488 GTTGATTCTTTTTGGATGTTGTAATCTGCAAGCGTT-CGACCATCCTCGAGCTGTTTACC 97546 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || || | |||||||||||| || | || || || || |||||| ||| Sbjct 97547 AGCGAAGATTAGTCTCTGTTGATCCGGAGGGATTCCTTCCTTGTCTTGGATCTTAGCTTT 97606 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||||| || |||||||| || || | ||| || || || || Sbjct 97607 AACGTTGTCAATGGTGTCTGAACTCTCGACTTCTAGGGTAATGGTTTTACCGGTAAGCGT 97666 Query 27230 TTTCACAAAGATTTGCATA 27248 || || || || |||||| Sbjct 97667 CTTGACGAATATCTGCATA 97685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424922804469768