Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq415 86.0 2e-11
>seq415
Length=609146
Score = 86.0 bits (94), Expect = 2e-11
Identities = 94/124 (76%), Gaps = 1/124 (1%)
Strand=Plus/Minus
Query 443750 CGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCT 443809
||| |||||| | || ||||||||| | || || || ||||| |||| || || || |
Sbjct 100532 CGGAAGCTTTTGT-TCAATCTTCTGGCTAAAGAAACGAGGACTCATGCCTGGACTAACAT 100474
Query 443810 TTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
|| |||||| ||||| ||| ||||| || | || ||||| ||||| ||||||||||
Sbjct 100473 TTTCCAACGAATTGATCTCTCGAGACGAAGGACTACACTGCGATTTCGCTTGTCTTCTCT 100414
Query 443870 ACAC 443873
||||
Sbjct 100413 ACAC 100410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588290435107355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |