Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 113 5e-20
>seq1127
Length=645582
Score = 113 bits (124), Expect = 5e-20
Identities = 166/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 176152 TTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCA 176211
||||||||| ||||| || |||| || || || |||||||| ||| | || |
Sbjct 574053 TTGAGTGTGACGACGACGTTTACGTTCTTGACGCGGCCGAGGAAGCTGGAATCGATTTGC 573994
Query 176212 ACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGG 176271
||||| ||||| |||||| | |||||||| ||||| || ||| | | || || | |
Sbjct 573993 CATACTCTTGCCGTGCTGGTTCTTGTTCGAGCTGTGCTGGTAAAGTTGTGTCTGGATCTG 573934
Query 176272 TAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGA 176331
| ||||| || ||| |||||||||||||| ||||| | || ||| || |||| |
Sbjct 573933 TTGATCAGTCTGACCAAAGTTTCCTTGATGATGAACAGATTGGTGAAGGGTTTGTTCTCA 573874
Query 176332 CTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGA 176386
|||||| | | |||||||| ||| | ||||| ||| | |||||||| ||
Sbjct 573873 CTTGTGCTGCTTATCCTACTTCTGATGTTACCATTGAAACTCACAAAGAAGAAGA 573819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596290510852240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |