Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078 215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq788 113 4e-20 seq1206 107 2e-18 seq713 95.1 1e-14 seq1311 93.3 4e-14 seq530 91.5 1e-13 seq687 89.7 5e-13 seq507 86.0 6e-12 seq912 84.2 2e-11 seq1891 82.4 7e-11 seq400 82.4 7e-11 >seq788 Length=1574065 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||||||||| ||| || || ||||||||||||||| ||||| | Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || | |||| || || ||||| |||||||| |||| | ||| ||||||| ||| Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||| |||||| || | || |||| || | | | ||||| ||| ||| Sbjct 100695 ATACCCTCTTTGTCC-TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 100640 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || |||| |||||| ||||| || ||||| Sbjct 100639 CACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589 Score = 111 bits (122), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||||||||| ||| || || ||||||||||||||| ||||| | Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || | |||| || || ||||| |||||||| |||| | ||| ||||||| ||| Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||| |||||| || | || |||| || | | | ||||| ||| ||| Sbjct 108131 ATACCCTCTTTGTCC-TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 108076 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || |||| |||||| ||||| || ||||| Sbjct 108075 YACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || || ||||||||| ||||| ||||||| Sbjct 694031 GCCACCACGGAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 693972 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || || | || ||||||||||| || ||||| || || ||||| ||||||| || Sbjct 693971 CAAAGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 693912 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||||| ||| || | || || | ||| | | | |||||| ||||| Sbjct 693911 GATACCTTCCTTATCC-TGGATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTCTCCA 693853 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| || || || || || ||||| ||||| ||||||||||||||| Sbjct 693852 CCTCCAGTGTGATAGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATG 693803 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| || |||| || || || ||||||||| ||||| ||||| | Sbjct 693574 CCACCACGTAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 693515 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || ||||||||||||||||| |||| | ||| ||||||| || Sbjct 693514 AAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 693455 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||| ||| || | || || | ||| | | | || || ||| ||| Sbjct 693454 ATGCCTTCCTTATCC-TGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCT---CTC 693399 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || ||||| ||||| |||||||| Sbjct 693398 TACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 693348 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||||||||| ||||| || || | Sbjct 101043 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 100984 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || |||| || | |||||| |||||||| |||| | ||| ||||||| || Sbjct 100983 AAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 100924 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| ||| ||| || |||| ||| | | | ||||| |||||| Sbjct 100923 ATACCTTCCTTATCCTGGATCTTG-GCTTTCACGTTGTCGATGGTGTCTGAACTCTCCAC 100865 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| || ||||||||||| Sbjct 100864 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||| | Sbjct 101271 CCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 101212 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || |||||||| || ||||| || || ||||| ||||||| || Sbjct 101211 AAAGTACGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 101152 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || ||||| || | || | ||||| |||||| Sbjct 101151 ATACCTTCCTTGTCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTCTCCAC 101093 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || |||| ||||| |||||||||||||| Sbjct 101092 TTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAAATCTGCAT 101045 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||||||||| ||||| || || | Sbjct 108479 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 108420 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || | || || | ||| || |||||||| |||| | ||| ||||||| || Sbjct 108419 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 108360 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814 | | ||||| ||| ||| || ||||| || | || |||||| |||||| Sbjct 108359 ATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATAGTGTCTGAACTCTCCAC 108301 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| || ||||||||||| Sbjct 108300 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| ||||| ||||| | ||||| | | || || Sbjct 108005 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCTGCCATCCTCC 107946 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | |||||| |||||||| |||| | ||| || |||| |||| | |||||| || | Sbjct 107945 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTATCTTGG 107886 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||||| || | | | ||||| |||||| || | || || ||||| Sbjct 107885 ATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAACTCTCCACTTCAAGAGTAATAGTTTT 107827 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||| |||||||||||||| Sbjct 107826 TYCCGTTAGGGTCTTGACGAAAATCTGCAT 107797 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || || ||||||||||||||| ||||| | Sbjct 693346 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 693287 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || | | || || || ||||| |||||||| |||| | ||| ||||||| || Sbjct 693286 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 693227 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| |||| | || | || || | ||| | | | ||||| |||||| Sbjct 693226 ATACCCTCTTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCAC 693168 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || |||| ||||| |||||||||||||| Sbjct 693167 CTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| ||||| ||||| | ||||| | | || || Sbjct 100569 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCTGCCATCCTCC 100510 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | |||||| |||||||| |||| | ||| || |||| |||| | |||||| || | Sbjct 100509 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTATCTTGG 100450 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||||| || | | | ||||| |||||| || | || || ||||| Sbjct 100449 ATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAACTCTCCACTTCAAGAGTAATAGTTTT 100391 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||| |||||||||||||| Sbjct 100390 TTCCGTTAGGGTCTTGACGAAAATCTGCAT 100361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| ||||| ||||| | || || | | || || Sbjct 693100 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTGCCATCCTCC 693041 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 | |||||| |||||||| |||| | ||| || |||| || | | |||||| || | Sbjct 693040 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATACCCTCCTTATCTTGG 692981 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| |||| | | | ||| || ||||||||| | || ||||| || Sbjct 692980 ATCTTAGCCTT-AACGTTGTCGATAGTATCAGAACTCTCCACCTCAAGAGTAATCGTCTT 692922 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| |||||||||||||| Sbjct 692921 TCCCGTTAGGGTCTTGACGAAAATCTGCAT 692892 >seq1206 Length=1516661 Score = 107 bits (118), Expect = 2e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| |||||||| ||||| || |||| Sbjct 451371 CCACCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 451430 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || |||| ||||||||||| |||||||| |||| ||||| ||||||| || Sbjct 451431 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 451490 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||| ||| || ||| || | || | ||||| ||||| | Sbjct 451491 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCAGAGGACTCGA 451548 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || ||||| || ||||| || || || ||||| |||||||| || Sbjct 451549 CCTCAAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 451600 >seq713 Length=176098 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| || || ||||| || ||||| || || | Sbjct 45984 CCACCACGGAGACGAAGCACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCAGCA 45925 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||| ||||| || || || | ||||||||| | || Sbjct 45924 AGGGTGCGTCCATCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 45865 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTC---GCTCGACTC 41811 | | ||||||||| ||| || |||| ||| || |||||| |||| || Sbjct 45864 ATACCTTCCTTGTCCTGGATCTTA-GCTTTAACATTATCAATAGTGTCTGAGCTC---TC 45809 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || ||||| || ||||||||||| Sbjct 45808 AACCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 45758 >seq1311 Length=673479 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||| || || ||| ||||| ||||| ||||| | || || | Sbjct 79822 AGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTT 79763 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || |||||||| ||||| || || || | ||||||||||| |||| | ||| Sbjct 79762 CCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCC 79703 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCCACCTCCACC 41821 |||||| || | || |||| || | | || || | ||| ||| ||||| | Sbjct 79702 TTGTCC-TGGATCTTGGCTTTGAC-ATTA-TCAATGGTGTCCGAACTCTCAACCTCGAGG 79646 Query 41822 GTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||||||| || || ||||| || || |||||||| Sbjct 79645 GTAATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 79605 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||| || || || || |||||||||||||| || || | Sbjct 80059 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 80000 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 | || || | || || ||||| || || ||||| || || | ||||||||| | ||| Sbjct 79999 AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 79940 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | || ||||||||| ||| | || || | || | | | ||| || || ||| Sbjct 79939 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGAC-ATTATCGATTGTGTCT-GAGCTCTC 79884 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||||| || || || || || ||||| || || |||||||| Sbjct 79883 CACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 79833 >seq530 Length=553347 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || ||| ||||||||||||||| || || | Sbjct 260440 CCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCC 260381 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || | | || || || ||||| |||||||| |||| | ||| ||||||| ||| Sbjct 260380 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 260321 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||| |||| | ||| | || |||| || | | | ||||| ||| ||| Sbjct 260320 ATACCCTCTTTGT-CTTGAATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 260265 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| |||| || || || || || |||| ||||| || ||||||||||| Sbjct 260264 CACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214 >seq687 Length=897029 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/236 (69%), Gaps = 16/236 (7%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || ||||| || || ||||||||| ||||| || || | Sbjct 268297 GCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 268238 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || | || ||||||||||| ||||| || || || | ||||||||||| || Sbjct 268237 AAGAGTACGGCCATCCTCGAGCTGCTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGG 268178 Query 41755 AACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTC---GCTC 41806 | | |||||||| ||| || ||| | | | ||| | || || ||| Sbjct 268177 TATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCGATG-----GTATCTGAGCT- 268124 Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| | ||||||||||| || || || ||||| || || |||||||| Sbjct 268123 --TTCGACCTCAAGGGTTATCGTTTTCCCTGTAAGAGTCTTGACAAAGATCTGCAT 268070 >seq507 Length=413332 Score = 86.0 bits (94), Expect = 6e-12 Identities = 162/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| || || | Sbjct 379429 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCA 379370 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 || || || | || || ||||| || || |||||||| || | |||||||||| | ||| Sbjct 379369 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAATATGAGTCTCTGTTGGTCCGGAGGG 379310 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || ||||||||| ||| | || || | ||| | | |||||| ||| || Sbjct 379309 ATCCCT-TCCTTGTCC-TGAATCTTGGCCTTGACGTTATCAATAGTGTCTGAGCT---CT 379255 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || || || || |||| ||||| || || || ||||| Sbjct 379254 CAACCTCCAGGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 379203 >seq912 Length=1276171 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/222 (69%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| ||| || || ||| || || ||||| ||||| | || ||||| Sbjct 751603 AGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCCAGTGTGCGA 751544 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || || || | ||| ||||||| || | | ||| Sbjct 751543 CCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCT 751484 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTCCACCTCCAC 41820 || ||| ||| | || |||| || | || | |||| |||| || ||||| | Sbjct 751483 TTATCC-TGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TCAACCTCTAG 751428 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||||||||| || ||||| || || || ||||| Sbjct 751427 AGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| || || | Sbjct 752296 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 752237 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 || || || | || || ||||| || || ||||| || || | |||||||||| | ||| Sbjct 752236 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 752177 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | || ||||||||| ||| | || || | ||| || | ||| || || ||| Sbjct 752176 ATCCCT-TCCTTGTCC-TGAATCTTGGCCTTGACGTTATCA-ATTGTGTCT-GAGCTCTC 752121 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || ||||| |||| ||||| || || || ||||| Sbjct 752120 AACCTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTCACAAAGATTTGCAT 752070 >seq1891 Length=27579 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/232 (68%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| | ||| || || ||||| || ||||| || || | Sbjct 10733 CCACCACGGAGACGAAGCACMARATGGAGRGTAGATTCCTTYTGGATGTTGTAATCAGCM 10792 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 | || || | || || ||||| || || || || || || | ||||||||| | ||| Sbjct 10793 ARRGTSCGWCCATCYTCAAGCTGYTTMCCRGCRAAGATRAGYCTCTGTTGGTCTGGTGGG 10852 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | || ||||||||| || | || |||| ||| | | |||||| ||| || Sbjct 10853 ATMCCT-TCCTTGTCC-TGGATCTTAGCTTTAACATTATCAATAGTGTCTGAGCT---CT 10907 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||| || || || || || || || ||||| || || |||||||| Sbjct 10908 CAACCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAWATCTGCAT 10959 >seq400 Length=13612 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||| || || || || |||||||| ||||| || || | Sbjct 1363 CCACCACGCAGACGCAACACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGCC 1422 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 | || || | || || ||||| || || ||||| || || | ||||||||| | ||| Sbjct 1423 AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 1482 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | || ||||||||| ||| | || || | || || | ||| || || ||| Sbjct 1483 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGACATTATCA-ATTGTGTCT-GAGCTCTC 1538 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||||| || || || || || ||||| || || |||||||| Sbjct 1539 CACCTCCAAAGTTATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 1589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462291061266800