Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20halleri_20subsp._20gemmifera_20[genbank_20GCA_5F900078
215.1_202016-09-29] 2,239 sequences; 196,243,198 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq788 113 4e-20
seq1206 107 2e-18
seq713 95.1 1e-14
seq1311 93.3 4e-14
seq530 91.5 1e-13
seq687 89.7 5e-13
seq507 86.0 6e-12
seq912 84.2 2e-11
seq1891 82.4 7e-11
seq400 82.4 7e-11
>seq788
Length=1574065
Score = 113 bits (124), Expect = 4e-20
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||||||||||| ||| || || ||||||||||||||| ||||| |
Sbjct 100815 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 100756
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | |||| || || ||||| |||||||| |||| | ||| ||||||| |||
Sbjct 100755 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 100696
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | ||| |||||| || | || |||| || | | | ||||| ||| |||
Sbjct 100695 ATACCCTCTTTGTCC-TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 100640
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| || || || || || |||| |||||| ||||| || |||||
Sbjct 100639 CACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 100589
Score = 111 bits (122), Expect = 1e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||||||||||| ||| || || ||||||||||||||| ||||| |
Sbjct 108251 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 108192
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | |||| || || ||||| |||||||| |||| | ||| ||||||| |||
Sbjct 108191 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 108132
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | ||| |||||| || | || |||| || | | | ||||| ||| |||
Sbjct 108131 ATACCCTCTTTGTCC-TGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 108076
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || || || || |||| |||||| ||||| || |||||
Sbjct 108075 YACCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 108025
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | |||| || || || ||||||||| ||||| |||||||
Sbjct 694031 GCCACCACGGAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 693972
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| || || | || ||||||||||| || ||||| || || ||||| ||||||| ||
Sbjct 693971 CAAAGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 693912
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | ||||| ||| || | || || | ||| | | | |||||| |||||
Sbjct 693911 GATACCTTCCTTATCC-TGGATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTCTCCA 693853
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||||| || || || || || ||||| ||||| |||||||||||||||
Sbjct 693852 CCTCCAGTGTGATAGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATG 693803
Score = 104 bits (114), Expect = 2e-17
Identities = 164/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| || |||| || || || ||||||||| ||||| ||||| |
Sbjct 693574 CCACCACGTAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 693515
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || ||||||||||||||||| |||| | ||| ||||||| ||
Sbjct 693514 AAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 693455
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| || ||||| ||| || | || || | ||| | | | || || ||| |||
Sbjct 693454 ATGCCTTCCTTATCC-TGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAGCT---CTC 693399
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || || || || || || ||||| ||||| ||||||||
Sbjct 693398 TACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 693348
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||||| || || || ||||||||| ||||| || || |
Sbjct 101043 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 100984
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| || |||| || | |||||| |||||||| |||| | ||| ||||||| ||
Sbjct 100983 AAGGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 100924
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||| ||| ||| || |||| ||| | | | ||||| ||||||
Sbjct 100923 ATACCTTCCTTATCCTGGATCTTG-GCTTTCACGTTGTCGATGGTGTCTGAACTCTCCAC 100865
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || || || ||||| || |||||||||||
Sbjct 100864 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 100817
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| ||||| |
Sbjct 101271 CCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCC 101212
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || || | || || |||||||| || ||||| || || ||||| ||||||| ||
Sbjct 101211 AAAGTACGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 101152
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCAC 41814
| | ||||||||| ||| || ||||| || | || | ||||| ||||||
Sbjct 101151 ATACCTTCCTTGTCCTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAGCTCTCCAC 101093
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || || |||| ||||| ||||||||||||||
Sbjct 101092 TTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAAATCTGCAT 101045
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||||| || || || ||||||||| ||||| || || |
Sbjct 108479 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 108420
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| || | || || | ||| || |||||||| |||| | ||| ||||||| ||
Sbjct 108419 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 108360
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814
| | ||||| ||| ||| || ||||| || | || |||||| ||||||
Sbjct 108359 ATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATAGTGTCTGAACTCTCCAC 108301
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || || || ||||| || |||||||||||
Sbjct 108300 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 108253
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||| ||||| ||||| | ||||| | | || ||
Sbjct 108005 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCTGCCATCCTCC 107946
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
| |||||| |||||||| |||| | ||| || |||| |||| | |||||| || |
Sbjct 107945 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTATCTTGG 107886
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || ||||| || | | | ||||| |||||| || | || || |||||
Sbjct 107885 ATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAACTCTCCACTTCAAGAGTAATAGTTTT 107827
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || ||||| ||||||||||||||
Sbjct 107826 TYCCGTTAGGGTCTTGACGAAAATCTGCAT 107797
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || || || ||||||||||||||| ||||| |
Sbjct 693346 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCC 693287
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | | || || || ||||| |||||||| |||| | ||| ||||||| ||
Sbjct 693286 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCCGGTGGG 693227
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||| |||| | || | || || | ||| | | | ||||| ||||||
Sbjct 693226 ATACCCTCTTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCCAC 693168
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || || || || || |||| ||||| ||||||||||||||
Sbjct 693167 CTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 693120
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||| ||||| ||||| | ||||| | | || ||
Sbjct 100569 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCTGCCATCCTCC 100510
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
| |||||| |||||||| |||| | ||| || |||| |||| | |||||| || |
Sbjct 100509 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTATCTTGG 100450
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || ||||| || | | | ||||| |||||| || | || || |||||
Sbjct 100449 ATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAACTCTCCACTTCAAGAGTAATAGTTTT 100391
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || ||||| ||||||||||||||
Sbjct 100390 TTCCGTTAGGGTCTTGACGAAAATCTGCAT 100361
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||| ||||| ||||| | || || | | || ||
Sbjct 693100 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTGCCATCCTCC 693041
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
| |||||| |||||||| |||| | ||| || |||| || | | |||||| || |
Sbjct 693040 AACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGGATACCCTCCTTATCTTGG 692981
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
|| || ||| |||| | | | ||| || ||||||||| | || ||||| ||
Sbjct 692980 ATCTTAGCCTT-AACGTTGTCGATAGTATCAGAACTCTCCACCTCAAGAGTAATCGTCTT 692922
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| || ||||| ||||||||||||||
Sbjct 692921 TCCCGTTAGGGTCTTGACGAAAATCTGCAT 692892
>seq1206
Length=1516661
Score = 107 bits (118), Expect = 2e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || ||||| |||||||| ||||| || ||||
Sbjct 451371 CCACCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 451430
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| || |||| ||||||||||| |||||||| |||| ||||| ||||||| ||
Sbjct 451431 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 451490
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| | |||||||| ||| || ||| || | || | ||||| ||||| |
Sbjct 451491 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCG--ATGGTGTCAGAGGACTCGA 451548
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | || ||||| || ||||| || || || ||||| |||||||| ||
Sbjct 451549 CCTCAAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 451600
>seq713
Length=176098
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| ||||| || || ||||| || ||||| || || |
Sbjct 45984 CCACCACGGAGACGAAGCACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCAGCA 45925
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || |||||||| ||||| || || || | ||||||||| | ||
Sbjct 45924 AGGGTGCGTCCATCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 45865
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTC---GCTCGACTC 41811
| | ||||||||| ||| || |||| ||| || |||||| |||| ||
Sbjct 45864 ATACCTTCCTTGTCCTGGATCTTA-GCTTTAACATTATCAATAGTGTCTGAGCTC---TC 45809
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || || || || || || ||||| || |||||||||||
Sbjct 45808 AACCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 45758
>seq1311
Length=673479
Score = 93.3 bits (102), Expect = 4e-14
Identities = 156/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || || ||| ||||| ||||| ||||| | || || |
Sbjct 79822 AGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTT 79763
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
|||| || |||||||| ||||| || || || | ||||||||||| |||| | |||
Sbjct 79762 CCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCC 79703
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCCACCTCCACC 41821
|||||| || | || |||| || | | || || | ||| ||| ||||| |
Sbjct 79702 TTGTCC-TGGATCTTGGCTTTGAC-ATTA-TCAATGGTGTCCGAACTCTCAACCTCGAGG 79646
Query 41822 GTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || |||||||| || || ||||| || || ||||||||
Sbjct 79645 GTAATGGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 79605
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||| || || || || |||||||||||||| || || |
Sbjct 80059 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 80000
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
| || || | || || ||||| || || ||||| || || | ||||||||| | |||
Sbjct 79999 AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 79940
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811
| | || ||||||||| ||| | || || | || | | | ||| || || |||
Sbjct 79939 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGAC-ATTATCGATTGTGTCT-GAGCTCTC 79884
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| ||||| || || || || || ||||| || || ||||||||
Sbjct 79883 CACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 79833
>seq530
Length=553347
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || || ||| ||||||||||||||| || || |
Sbjct 260440 CCTCCACGGAGACGCAAGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCC 260381
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| || | | || || || ||||| |||||||| |||| | ||| ||||||| |||
Sbjct 260380 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 260321
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811
| | ||| |||| | ||| | || |||| || | | | ||||| ||| |||
Sbjct 260320 ATACCCTCTTTGT-CTTGAATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCT---CTC 260265
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| |||| || || || || || |||| ||||| || |||||||||||
Sbjct 260264 CACTTCCAAAGTAATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 260214
>seq687
Length=897029
Score = 89.7 bits (98), Expect = 5e-13
Identities = 163/236 (69%), Gaps = 16/236 (7%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || ||||| || || ||||||||| ||||| || || |
Sbjct 268297 GCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 268238
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || ||||||||||| ||||| || || || | ||||||||||| ||
Sbjct 268237 AAGAGTACGGCCATCCTCGAGCTGCTTACCGGCAAAGATAAGTCTCTGTTGGTCCGGAGG 268178
Query 41755 AACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTC---GCTC 41806
| | |||||||| ||| || ||| | | | ||| | || || |||
Sbjct 268177 TATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCGATG-----GTATCTGAGCT- 268124
Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| ||||| | ||||||||||| || || || ||||| || || ||||||||
Sbjct 268123 --TTCGACCTCAAGGGTTATCGTTTTCCCTGTAAGAGTCTTGACAAAGATCTGCAT 268070
>seq507
Length=413332
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/232 (70%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| || || |
Sbjct 379429 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCA 379370
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754
|| || || | || || ||||| || || |||||||| || | |||||||||| | |||
Sbjct 379369 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAATATGAGTCTCTGTTGGTCCGGAGGG 379310
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
| | || ||||||||| ||| | || || | ||| | | |||||| ||| ||
Sbjct 379309 ATCCCT-TCCTTGTCC-TGAATCTTGGCCTTGACGTTATCAATAGTGTCTGAGCT---CT 379255
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| || || || || || |||| ||||| || || || |||||
Sbjct 379254 CAACCTCCAGGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCAT 379203
>seq912
Length=1276171
Score = 84.2 bits (92), Expect = 2e-11
Identities = 154/222 (69%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | ||||| ||| || || ||| || || ||||| ||||| | || |||||
Sbjct 751603 AGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCCAGTGTGCGA 751544
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || |||||||| || || || || || | ||| ||||||| || | | |||
Sbjct 751543 CCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCCTCT 751484
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTC---GCTCGACTCCACCTCCAC 41820
|| ||| ||| | || |||| || | || | |||| |||| || ||||| |
Sbjct 751483 TTATCC-TGAATCTTAGCTTTGACATTGTCAATGGTGTCTGAGCTC---TCAACCTCTAG 751428
Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || ||||||||||| || ||||| || || || |||||
Sbjct 751427 AGTGATTGTTTTACCCGTGAGAGTCTTCACAAAGATTTGCAT 751386
Score = 82.4 bits (90), Expect = 7e-11
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| || || |
Sbjct 752296 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCA 752237
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754
|| || || | || || ||||| || || ||||| || || | |||||||||| | |||
Sbjct 752236 AGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 752177
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811
| | || ||||||||| ||| | || || | ||| || | ||| || || |||
Sbjct 752176 ATCCCT-TCCTTGTCC-TGAATCTTGGCCTTGACGTTATCA-ATTGTGTCT-GAGCTCTC 752121
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| || || || ||||| |||| ||||| || || || |||||
Sbjct 752120 AACCTCCAAGGTAATAGTCTTACCTGTCAAAGTCTTCACAAAGATTTGCAT 752070
>seq1891
Length=27579
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/232 (68%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| | ||| || || ||||| || ||||| || || |
Sbjct 10733 CCACCACGGAGACGAAGCACMARATGGAGRGTAGATTCCTTYTGGATGTTGTAATCAGCM 10792
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
| || || | || || ||||| || || || || || || | ||||||||| | |||
Sbjct 10793 ARRGTSCGWCCATCYTCAAGCTGYTTMCCRGCRAAGATRAGYCTCTGTTGGTCTGGTGGG 10852
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810
| || ||||||||| || | || |||| ||| | | |||||| ||| ||
Sbjct 10853 ATMCCT-TCCTTGTCC-TGGATCTTAGCTTTAACATTATCAATAGTGTCTGAGCT---CT 10907
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||| || || || || || || || ||||| || || ||||||||
Sbjct 10908 CAACCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAWATCTGCAT 10959
>seq400
Length=13612
Score = 82.4 bits (90), Expect = 7e-11
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||| || || || || |||||||| ||||| || || |
Sbjct 1363 CCACCACGCAGACGCAACACAAGGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGCC 1422
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754
| || || | || || ||||| || || ||||| || || | ||||||||| | |||
Sbjct 1423 AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 1482
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811
| | || ||||||||| ||| | || || | || || | ||| || || |||
Sbjct 1483 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGACATTATCA-ATTGTGTCT-GAGCTCTC 1538
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| ||||| || || || || || ||||| || || ||||||||
Sbjct 1539 CACCTCCAAAGTTATGGTCTTGCCGGTAAGGGTCTTCACAAAGATCTGCAT 1589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462291061266800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |