Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 9e-25
seq7 125 1e-23
seq6 120 5e-22
seq4 120 5e-22
seq2 102 1e-16
seq3 98.7 2e-15
>seq1
Length=33132539
Score = 129 bits (142), Expect = 9e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || || | || || ||||| || || || ||||| ||||| ||||| ||
Sbjct 10396897 AATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCATC 10396956
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| ||||| ||| | ||| ||| |||||||| |||||||| || ||||| |||||
Sbjct 10396957 AGACACAATCGACAATGTGAAAGCGAAGATTCAAGACAAAGAAGGAATCCCACCGGATCA 10397016
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| || | || || || ||||||||||| || ||| | ||||| | | ||||| ||
Sbjct 10397017 GCAACGGTTAATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTCGCTGATTACAA 10397076
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
||||| ||||| || || | |||||||| | ||| | |||| |||
Sbjct 10397077 CATTCAGAAAGAGTCGACGCTTCATTTGGTGCTTCGTCTGAGAGGAGGT 10397125
Score = 113 bits (124), Expect = 7e-20
Identities = 165/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| ||||| || ||||| || || || ||||| || || |||| | || || |
Sbjct 29080614 ATGCAGATATTCATCAAGACGCTCACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 29080673
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| || | ||| || || ||||| || ||||| || || || |||||
Sbjct 29080674 -GACACCATTGACAACGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCA 29080732
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| || || || || || || ||||| | |||||| ||||||| | | |||||| ||
Sbjct 29080733 ACAGAGACTAATCTTCGCTGGTAAACAGCTCGAGGATGGTCGAACGCTTGCAGATTACAA 29080792
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||||||||||||| | ||| | || | ||| | ||||||||||
Sbjct 29080793 CATCCAAAAAGAATCAACTCTCCATCTCGTGCTTCGTCTGAGAGGTGGTAT 29080843
Score = 100 bits (110), Expect = 4e-16
Identities = 100/129 (78%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 124622 GAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAA 124681
||||| || || ||||| || ||||||||||||||||| ||| | || ||||| || ||
Sbjct 16745134 GAAAA--CAGGACAAAGAGGGAATACCACCTGATCAACAGAGGTTGATATTTGCTGGTAA 16745191
Query 124682 ACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCA 124741
||| | || ||| |||||||||||| ||||| || || || ||||| || ||| | ||
Sbjct 16745192 GCAACTTGAAGATGGTCGAACATTAGCGGATTACAACATCCAGAAAGAGTCGACTCTTCA 16745251
Query 124742 TTTGGTTTT 124750
||||| ||
Sbjct 16745252 CTTGGTCTT 16745260
>seq7
Length=24649197
Score = 125 bits (138), Expect = 1e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||||||| | || || || || |||| ||| || || |||| |||| ||| |
Sbjct 18994126 ATGCAAATATTTGTGAAAACCCTTACTGGCAGAACCATTACCCTAGAAGTTGAGAGCTCA 18994067
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | ||| || ||||||||||| |||| || || | || ||
Sbjct 18994066 -GACACCATTGACAATGTGAAAGCTAAGATTCAAGATAAGGAAGAAATCCCTGCGGACCA 18994008
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| || ||||| || || || || ||| | |||||| ||||||| ||| |||||| ||
Sbjct 18994007 GCAGAGACTTATCTTCGCTGGCAAGCAACTTGAGGATGGTCGAACCCTAGCAGATTACAA 18993948
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || |||||||||||| | ||||||||| | ||| | | ||||| ||
Sbjct 18993947 CATCCAGAAAGAATCAACTCTCCATTTGGTTCTTCGTCTTTGCGGTGGGAT 18993897
Score = 102 bits (112), Expect = 1e-16
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
||||| || ||| | || || || || |||||||| |||||| | ||| |||| ||| |
Sbjct 18994354 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAAACCATAACTTTGGAGGTTGAGAGCTCA 18994295
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| |||||| ||| | ||| || ||||||||||| ||||| || || || || ||
Sbjct 18994294 -GACACAATTGACAATCTTAAAGCTAAGATTCAAGATAAGGAAGGGATCCCTCCGGACCA 18994236
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| || ||||| ||||| || || || | ||||| |||| || | | |||||| ||
Sbjct 18994235 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGACGGTCGCACCCTTGCAGATTACAA 18994176
Query 124718 TATTCAAAAAGAATCAAC 124735
||||| || || || ||
Sbjct 18994175 CATTCAGAAGGAGTCGAC 18994158
Score = 95.1 bits (104), Expect = 2e-14
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 124626 ATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAA 124685
|| ||||| |||||||| || || | || || ||| ||||||| ||||| || ||||||
Sbjct 18994951 ATCCAAGACAAAGAAGGGATTCCTCTAGACCAGCAACGGCTTATCTTTGCCGGTAAACAA 18994892
Query 124686 TTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTG 124745
| |||||| | || || || | ||||| ||||||||||| || |||| | | || |||
Sbjct 18994891 CTCGAGGATGGCCGTACTTTGGCTGATTACAATATTCAAAAGGAGTCAATTCTCCACTTG 18994832
Query 124746 G-TTTTACGTTTACGAGGTGGTAT 124768
| ||| ||| | ||||||||||
Sbjct 18994831 GCCCTTAGGTTGA-GAGGTGGTAT 18994809
>seq6
Length=25113588
Score = 120 bits (132), Expect = 5e-22
Identities = 169/232 (73%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||| ||| | || ||||| || ||||| || || ||| | ||| |||| |||
Sbjct 10621862 ATGCAAATTTTTGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTC- 10621920
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
||| || ||| ||| |||| || || ||||| || || ||||| || || | || |
Sbjct 10621921 TGACACCATTGACAATGTTAAGGCA-AAGATTCAGGACAAGGAAGGGATTCCTCTAGACC 10621979
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| ||||| | || || || || ||||| |||| ||| | || || || | ||||| |
Sbjct 10621980 AGCAAAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGCCGTACTTTGGCCGATTACA 10622039
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
| || || |||||||||||| | || |||||| | |||||| ||||||||||
Sbjct 10622040 ACATCCAGAAAGAATCAACTCTCCACTTGGTTCTTCGTTTAAGAGGTGGTAT 10622091
Score = 116 bits (128), Expect = 6e-21
Identities = 168/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||| ||| | || ||||| || ||||| || || ||| | ||| |||| |||
Sbjct 906102 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTC- 906044
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
||| || || ||| |||| || || ||||| || || ||||| || || || || |
Sbjct 906043 TGACACCATCGACAATGTTAAGGCA-AAGATTCAGGACAAGGAAGGCATTCCTCCGGACC 905985
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| || || | || || || || ||||| |||| ||| |||| || || ||||| |
Sbjct 905984 AGCAGAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTACCTTGACCGATTACA 905925
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||| || ||||||||||| | || |||||| | |||||| ||||||||||
Sbjct 905924 ATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTCGTTTAAGAGGTGGTAT 905873
Score = 102 bits (112), Expect = 1e-16
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||| | ||| | || ||||| || || || || || ||| | ||| |||| |||
Sbjct 8749690 ATGCAAGTTTTTGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTC- 8749632
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
||| || || ||| |||| || || || || || || ||||| || || || || |
Sbjct 8749631 TGACACCATCGACAATGTTAAGGCA-AAGATCCAGGACAAGGAAGGCATTCCTCCGGACC 8749573
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| ||||| | || || || || || || |||| ||| | || || || | ||||| |
Sbjct 8749572 AGCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGTACCTTGGCTGATTACA 8749513
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||| || ||||||||||| | ||||||||| | || ||| ||||||||||
Sbjct 8749512 ATATCCAGAAAGAATCAACACTCCATTTGGTTCTCCGGTTAAGAGGTGGTAT 8749461
Score = 100 bits (110), Expect = 4e-16
Identities = 164/235 (70%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 124535 TACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAG 124593
|||| ||||| || ||| | |||||||| || || || ||||| || | ||| | |||
Sbjct 22900204 TACAGATGCAGATCTTTGTTAAGACACTCACCGGAAAGACTATCACCCTCGAGGTGGAAA 22900263
Query 124594 CAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTG 124653
||| || || || | || || || || || || ||||| || || || |
Sbjct 22900264 GCTCTGACACCATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGG 22900323
Query 124654 ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATT 124713
|||| |||||||||||||| || |||||||| |||| ||| | || || || | ||||
Sbjct 22900324 ATCAGCAAAGGCTTATTTTCGCCGGAAAACAGCTAGAAGATGGCCGCACGTTGGCTGATT 22900383
Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
| ||||| || || ||||| || | || |||||| | | | || ||||||||
Sbjct 22900384 ACAATATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTAT 22900438
Score = 93.3 bits (102), Expect = 6e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || || || || ||||| || || || ||||| || ||||||||||| || ||||||
Sbjct 22759167 AAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAGAGGCTTATTTTCGCCGGAAAA 22759108
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|| |||||||| | || || || | ||||| ||||| || || ||||| || | ||
Sbjct 22759107 CAGCTAGAGGATGGCCGTACGTTGGCTGATTACAATATCCAGAAGGAATCCACCCTCCAC 22759048
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
|||||| | | | || ||||||||
Sbjct 22759047 TTGGTTCTCAGGCTCCGTGGTGGTAT 22759022
Score = 86.0 bits (94), Expect = 9e-12
Identities = 162/237 (68%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 124533 AATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA 124591
|||||| ||||| || || | || || || || || || ||||| || | ||| | ||
Sbjct 22886012 AATACAGATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGA 22886071
Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651
| ||| || || || | ||| || || || || || ||||| || || ||
Sbjct 22886072 AAGCTCTGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCC 22886131
Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711
||||| || ||||||||||| || ||||| || || |||||| | || || || | ||
Sbjct 22886132 GGATCAGCAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGA 22886191
Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || || || ||||| || | || |||||| | | | || ||||||||
Sbjct 22886192 TTACAACATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTAT 22886248
Score = 86.0 bits (94), Expect = 9e-12
Identities = 162/237 (68%), Gaps = 1/237 (0%)
Strand=Plus/Plus
Query 124533 AATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA 124591
|||||| ||||| || || | || || || || || || ||||| || | ||| | ||
Sbjct 23069021 AATACAGATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGA 23069080
Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651
| ||| || || || | ||| || || || || || ||||| || || ||
Sbjct 23069081 AAGCTCTGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCC 23069140
Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711
||||| || ||||||||||| || ||||| || || |||||| | || || || | ||
Sbjct 23069141 GGATCAGCAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGA 23069200
Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||| || || || || ||||| || | || |||||| | | | || ||||||||
Sbjct 23069201 TTACAACATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTAT 23069257
>seq4
Length=23328337
Score = 120 bits (132), Expect = 5e-22
Identities = 169/232 (73%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||| ||| | || ||||| || ||||| || || ||| | ||| |||| |||
Sbjct 15772023 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTC- 15771965
Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656
||| || || ||| |||| || || ||||| || || ||||| || || || || |
Sbjct 15771964 TGACACCATCGACAATGTTAAGGCA-AAGATTCAGGACAAGGAAGGCATTCCTCCGGACC 15771906
Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
| || || | || || || || ||||| |||| ||| |||| || || | ||||| |
Sbjct 15771905 AGCAGAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTACCTTGGCCGATTACA 15771846
Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|||| || ||||||||||| | || |||||| | |||||| ||||||||||
Sbjct 15771845 ATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTCGTTTAAGAGGTGGTAT 15771794
Score = 104 bits (114), Expect = 4e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688
|| || ||||| ||||| |||||||||||||||||||| |||||||| || || |||||
Sbjct 16908196 CAGGACAAAGAGGGTATTCCACCTGATCAACAAAGGCTGATTTTTGCTGGTAAGCAATTG 16908255
Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748
|| ||| | || || |||| ||||| || || || ||||| || ||| | ||| ||||
Sbjct 16908256 GAAGATGGCCGGACCTTAGCCGATTACAACATCCAGAAAGAGTCTACTCTTCATCTGGTC 16908315
Query 124749 TT 124750
||
Sbjct 16908316 TT 16908317
>seq2
Length=19320864
Score = 102 bits (112), Expect = 1e-16
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||||||| | || || | |||||||| || || || | ||| |||| ||| |
Sbjct 9126016 ATGCAAATATTTGTGAAAACTTTGACAGGCAAGACCATTACGTTGGAGGTTGAGAGCTCA 9125957
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| ||||| ||| | || || ||||| || || || || || ||||| || ||
Sbjct 9125956 -GACACAATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCA 9125898
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| || || || || || || ||||| | |||||| |||| || |||| ||||| ||
Sbjct 9125897 ACAGAGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGGACTTTAGCTGATTACAA 9125838
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
|| || || || || ||| | || |||||| | ||| | || |||||
Sbjct 9125837 CATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 9125790
Score = 89.7 bits (98), Expect = 8e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||||||| | || || | |||||||| || || || | ||| |||| ||| |
Sbjct 9215253 ATGCAAATATTTGTGAAAACTTTGACAGGCAAGACCATTACGTTGGAGGTTGAGAGCTCA 9215194
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| ||||| ||| | || || ||||| || || || || || ||||| || ||
Sbjct 9215193 -GACACAATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCA 9215135
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| |||||||| ||||| || || || | || ||| | || || | | ||||| ||
Sbjct 9215134 ACAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGATGGACGCACCCTTGCTGATTACAA 9215075
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| || || || | ||| | || | ||| | || ||||||||
Sbjct 9215074 CATCCAAAAGGAGTCTACCCTCCATCTTGTGCTTCGTCTCCGTGGTGGTAT 9215024
>seq3
Length=24464547
Score = 98.7 bits (108), Expect = 2e-15
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA-GCAAA 124597
|||||||| ||| | ||||| || || || || || |||||| | ||| | ||| || |
Sbjct 3877152 ATGCAAATCTTTGTGAAGACTCTTACGGGAAAGACCATAACTCTTGAGGTCGAAAGCTCA 3877093
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| |||||| || | || || || |||||||||||||| || || ||||| ||
Sbjct 3877092 -GACACAATTGACAACGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCTGACCA 3877034
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| ||||| || |||||||| || ||| | |||||| | | || | | ||||| |
Sbjct 3877033 GCAGAGGCTGATCTTTGCAGGTAAGCAACTCGAGGATGGCCATACTCTTGCGGATTACAG 3876974
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || ||||| ||||| | || | || | ||| | || ||||||||
Sbjct 3876973 CATCCAGAAAGAGTCAACACTTCACCTTGTCCTTCGTCTTCGCGGTGGTAT 3876923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755449427532800
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