Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1 129 9e-25 seq7 125 1e-23 seq6 120 5e-22 seq4 120 5e-22 seq2 102 1e-16 seq3 98.7 2e-15 >seq1 Length=33132539 Score = 129 bits (142), Expect = 9e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || || ||||| || || || ||||| ||||| ||||| || Sbjct 10396897 AATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCATC 10396956 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | ||| ||| |||||||| |||||||| || ||||| ||||| Sbjct 10396957 AGACACAATCGACAATGTGAAAGCGAAGATTCAAGACAAAGAAGGAATCCCACCGGATCA 10397016 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || | || || || ||||||||||| || ||| | ||||| | | ||||| || Sbjct 10397017 GCAACGGTTAATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTCGCTGATTACAA 10397076 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||| ||||| || || | |||||||| | ||| | |||| ||| Sbjct 10397077 CATTCAGAAAGAGTCGACGCTTCATTTGGTGCTTCGTCTGAGAGGAGGT 10397125 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| ||||| || ||||| || || || ||||| || || |||| | || || | Sbjct 29080614 ATGCAGATATTCATCAAGACGCTCACCGGTAAAACCATTACCCTAGAAGTCGAGAGTTCA 29080673 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| || | ||| || || ||||| || ||||| || || || ||||| Sbjct 29080674 -GACACCATTGACAACGTTAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCGGATCA 29080732 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || || || || || || ||||| | |||||| ||||||| | | |||||| || Sbjct 29080733 ACAGAGACTAATCTTCGCTGGTAAACAGCTCGAGGATGGTCGAACGCTTGCAGATTACAA 29080792 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||||||| | ||| | || | ||| | |||||||||| Sbjct 29080793 CATCCAAAAAGAATCAACTCTCCATCTCGTGCTTCGTCTGAGAGGTGGTAT 29080843 Score = 100 bits (110), Expect = 4e-16 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 124622 GAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAA 124681 ||||| || || ||||| || ||||||||||||||||| ||| | || ||||| || || Sbjct 16745134 GAAAA--CAGGACAAAGAGGGAATACCACCTGATCAACAGAGGTTGATATTTGCTGGTAA 16745191 Query 124682 ACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCA 124741 ||| | || ||| |||||||||||| ||||| || || || ||||| || ||| | || Sbjct 16745192 GCAACTTGAAGATGGTCGAACATTAGCGGATTACAACATCCAGAAAGAGTCGACTCTTCA 16745251 Query 124742 TTTGGTTTT 124750 ||||| || Sbjct 16745252 CTTGGTCTT 16745260 >seq7 Length=24649197 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | || || || || |||| ||| || || |||| |||| ||| | Sbjct 18994126 ATGCAAATATTTGTGAAAACCCTTACTGGCAGAACCATTACCCTAGAAGTTGAGAGCTCA 18994067 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| || ||||||||||| |||| || || | || || Sbjct 18994066 -GACACCATTGACAATGTGAAAGCTAAGATTCAAGATAAGGAAGAAATCCCTGCGGACCA 18994008 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || ||||| || || || || ||| | |||||| ||||||| ||| |||||| || Sbjct 18994007 GCAGAGACTTATCTTCGCTGGCAAGCAACTTGAGGATGGTCGAACCCTAGCAGATTACAA 18993948 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||||||| | ||||||||| | ||| | | ||||| || Sbjct 18993947 CATCCAGAAAGAATCAACTCTCCATTTGGTTCTTCGTCTTTGCGGTGGGAT 18993897 Score = 102 bits (112), Expect = 1e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | || || || || |||||||| |||||| | ||| |||| ||| | Sbjct 18994354 ATGCAGATCTTTGTGAAAACCCTCACTGGCAAAACCATAACTTTGGAGGTTGAGAGCTCA 18994295 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | ||| || ||||||||||| ||||| || || || || || Sbjct 18994294 -GACACAATTGACAATCTTAAAGCTAAGATTCAAGATAAGGAAGGGATCCCTCCGGACCA 18994236 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || ||||| ||||| || || || | ||||| |||| || | | |||||| || Sbjct 18994235 GCAGAGACTTATCTTTGCCGGTAAGCAGCTTGAGGACGGTCGCACCCTTGCAGATTACAA 18994176 Query 124718 TATTCAAAAAGAATCAAC 124735 ||||| || || || || Sbjct 18994175 CATTCAGAAGGAGTCGAC 18994158 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 124626 ATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAA 124685 || ||||| |||||||| || || | || || ||| ||||||| ||||| || |||||| Sbjct 18994951 ATCCAAGACAAAGAAGGGATTCCTCTAGACCAGCAACGGCTTATCTTTGCCGGTAAACAA 18994892 Query 124686 TTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTG 124745 | |||||| | || || || | ||||| ||||||||||| || |||| | | || ||| Sbjct 18994891 CTCGAGGATGGCCGTACTTTGGCTGATTACAATATTCAAAAGGAGTCAATTCTCCACTTG 18994832 Query 124746 G-TTTTACGTTTACGAGGTGGTAT 124768 | ||| ||| | |||||||||| Sbjct 18994831 GCCCTTAGGTTGA-GAGGTGGTAT 18994809 >seq6 Length=25113588 Score = 120 bits (132), Expect = 5e-22 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | || ||||| || ||||| || || ||| | ||| |||| ||| Sbjct 10621862 ATGCAAATTTTTGTGAAAACACTCACTGGCAAGACCATTACTCTCGAGGTTGAGAGCTC- 10621920 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||| || ||| ||| |||| || || ||||| || || ||||| || || | || | Sbjct 10621921 TGACACCATTGACAATGTTAAGGCA-AAGATTCAGGACAAGGAAGGGATTCCTCTAGACC 10621979 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | ||||| | || || || || ||||| |||| ||| | || || || | ||||| | Sbjct 10621980 AGCAAAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGCCGTACTTTGGCCGATTACA 10622039 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || || |||||||||||| | || |||||| | |||||| |||||||||| Sbjct 10622040 ACATCCAGAAAGAATCAACTCTCCACTTGGTTCTTCGTTTAAGAGGTGGTAT 10622091 Score = 116 bits (128), Expect = 6e-21 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | || ||||| || ||||| || || ||| | ||| |||| ||| Sbjct 906102 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTC- 906044 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||| || || ||| |||| || || ||||| || || ||||| || || || || | Sbjct 906043 TGACACCATCGACAATGTTAAGGCA-AAGATTCAGGACAAGGAAGGCATTCCTCCGGACC 905985 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || || | || || || || ||||| |||| ||| |||| || || ||||| | Sbjct 905984 AGCAGAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTACCTTGACCGATTACA 905925 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||| || ||||||||||| | || |||||| | |||||| |||||||||| Sbjct 905924 ATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTCGTTTAAGAGGTGGTAT 905873 Score = 102 bits (112), Expect = 1e-16 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||| | ||| | || ||||| || || || || || ||| | ||| |||| ||| Sbjct 8749690 ATGCAAGTTTTTGTGAAAACACTCACTGGTAAGACCATCACTCTCGAGGTTGAGAGCTC- 8749632 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||| || || ||| |||| || || || || || || ||||| || || || || | Sbjct 8749631 TGACACCATCGACAATGTTAAGGCA-AAGATCCAGGACAAGGAAGGCATTCCTCCGGACC 8749573 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | ||||| | || || || || || || |||| ||| | || || || | ||||| | Sbjct 8749572 AGCAAAGATTGATCTTCGCTGGTAAGCAGCTAGAAGATGGCCGTACCTTGGCTGATTACA 8749513 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||| || ||||||||||| | ||||||||| | || ||| |||||||||| Sbjct 8749512 ATATCCAGAAAGAATCAACACTCCATTTGGTTCTCCGGTTAAGAGGTGGTAT 8749461 Score = 100 bits (110), Expect = 4e-16 Identities = 164/235 (70%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 124535 TACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAG 124593 |||| ||||| || ||| | |||||||| || || || ||||| || | ||| | ||| Sbjct 22900204 TACAGATGCAGATCTTTGTTAAGACACTCACCGGAAAGACTATCACCCTCGAGGTGGAAA 22900263 Query 124594 CAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTG 124653 ||| || || || | || || || || || || ||||| || || || | Sbjct 22900264 GCTCTGACACCATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCGG 22900323 Query 124654 ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATT 124713 |||| |||||||||||||| || |||||||| |||| ||| | || || || | |||| Sbjct 22900324 ATCAGCAAAGGCTTATTTTCGCCGGAAAACAGCTAGAAGATGGCCGCACGTTGGCTGATT 22900383 Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | ||||| || || ||||| || | || |||||| | | | || |||||||| Sbjct 22900384 ACAATATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTAT 22900438 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || || || || ||||| || || || ||||| || ||||||||||| || |||||| Sbjct 22759167 AAGATCCAGGACAAGGAAGGCATTCCTCCGGATCAGCAGAGGCTTATTTTCGCCGGAAAA 22759108 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || |||||||| | || || || | ||||| ||||| || || ||||| || | || Sbjct 22759107 CAGCTAGAGGATGGCCGTACGTTGGCTGATTACAATATCCAGAAGGAATCCACCCTCCAC 22759048 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||| | | | || |||||||| Sbjct 22759047 TTGGTTCTCAGGCTCCGTGGTGGTAT 22759022 Score = 86.0 bits (94), Expect = 9e-12 Identities = 162/237 (68%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 124533 AATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA 124591 |||||| ||||| || || | || || || || || || ||||| || | ||| | || Sbjct 22886012 AATACAGATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGA 22886071 Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651 | ||| || || || | ||| || || || || || ||||| || || || Sbjct 22886072 AAGCTCTGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCC 22886131 Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711 ||||| || ||||||||||| || ||||| || || |||||| | || || || | || Sbjct 22886132 GGATCAGCAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGA 22886191 Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || || || || ||||| || | || |||||| | | | || |||||||| Sbjct 22886192 TTACAACATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTAT 22886248 Score = 86.0 bits (94), Expect = 9e-12 Identities = 162/237 (68%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 124533 AATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA 124591 |||||| ||||| || || | || || || || || || ||||| || | ||| | || Sbjct 23069021 AATACAGATGCAGATCTTCGTTAAAACTCTCACCGGAAAGACTATCACCCTTGAGGTGGA 23069080 Query 124592 AGCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACC 124651 | ||| || || || | ||| || || || || || ||||| || || || Sbjct 23069081 AAGCTCTGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCTCC 23069140 Query 124652 TGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGA 124711 ||||| || ||||||||||| || ||||| || || |||||| | || || || | || Sbjct 23069141 GGATCAGCAGAGGCTTATTTTCGCCGGAAAGCAGTTGGAGGATGGCCGTACGTTGGCTGA 23069200 Query 124712 TTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || || || || ||||| || | || |||||| | | | || |||||||| Sbjct 23069201 TTACAACATCCAGAAGGAATCCACCCTCCACTTGGTTCTCAGGCTCCGTGGTGGTAT 23069257 >seq4 Length=23328337 Score = 120 bits (132), Expect = 5e-22 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| | || ||||| || ||||| || || ||| | ||| |||| ||| Sbjct 15772023 ATGCAAATCTTTGTGAAAACACTCACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTC- 15771965 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||| || || ||| |||| || || ||||| || || ||||| || || || || | Sbjct 15771964 TGACACCATCGACAATGTTAAGGCA-AAGATTCAGGACAAGGAAGGCATTCCTCCGGACC 15771906 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || || | || || || || ||||| |||| ||| |||| || || | ||||| | Sbjct 15771905 AGCAGAGATTAATCTTCGCCGGTAAACAGCTAGAAGATGGTCGTACCTTGGCCGATTACA 15771846 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||| || ||||||||||| | || |||||| | |||||| |||||||||| Sbjct 15771845 ATATCCAGAAAGAATCAACCCTCCACTTGGTTCTTCGTTTAAGAGGTGGTAT 15771794 Score = 104 bits (114), Expect = 4e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 124629 CAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTA 124688 || || ||||| ||||| |||||||||||||||||||| |||||||| || || ||||| Sbjct 16908196 CAGGACAAAGAGGGTATTCCACCTGATCAACAAAGGCTGATTTTTGCTGGTAAGCAATTG 16908255 Query 124689 GAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 || ||| | || || |||| ||||| || || || ||||| || ||| | ||| |||| Sbjct 16908256 GAAGATGGCCGGACCTTAGCCGATTACAACATCCAGAAAGAGTCTACTCTTCATCTGGTC 16908315 Query 124749 TT 124750 || Sbjct 16908316 TT 16908317 >seq2 Length=19320864 Score = 102 bits (112), Expect = 1e-16 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | || || | |||||||| || || || | ||| |||| ||| | Sbjct 9126016 ATGCAAATATTTGTGAAAACTTTGACAGGCAAGACCATTACGTTGGAGGTTGAGAGCTCA 9125957 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | || || ||||| || || || || || ||||| || || Sbjct 9125956 -GACACAATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCA 9125898 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| || || || || || || ||||| | |||||| |||| || |||| ||||| || Sbjct 9125897 ACAGAGACTCATCTTCGCTGGTAAACAGCTCGAGGATGGTCGGACTTTAGCTGATTACAA 9125838 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || || || || ||| | || |||||| | ||| | || ||||| Sbjct 9125837 CATCCAGAAGGAGTCGACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 9125790 Score = 89.7 bits (98), Expect = 8e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | || || | |||||||| || || || | ||| |||| ||| | Sbjct 9215253 ATGCAAATATTTGTGAAAACTTTGACAGGCAAGACCATTACGTTGGAGGTTGAGAGCTCA 9215194 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || ||||| ||| | || || ||||| || || || || || ||||| || || Sbjct 9215193 -GACACAATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAGGGGATCCCACCAGACCA 9215135 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| |||||||| ||||| || || || | || ||| | || || | | ||||| || Sbjct 9215134 ACAGAGGCTTATCTTTGCCGGTAAGCAGCTTGAAGATGGACGCACCCTTGCTGATTACAA 9215075 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | ||| | || | ||| | || |||||||| Sbjct 9215074 CATCCAAAAGGAGTCTACCCTCCATCTTGTGCTTCGTCTCCGTGGTGGTAT 9215024 >seq3 Length=24464547 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA-GCAAA 124597 |||||||| ||| | ||||| || || || || || |||||| | ||| | ||| || | Sbjct 3877152 ATGCAAATCTTTGTGAAGACTCTTACGGGAAAGACCATAACTCTTGAGGTCGAAAGCTCA 3877093 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| || | || || || |||||||||||||| || || ||||| || Sbjct 3877092 -GACACAATTGACAACGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCTGACCA 3877034 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || |||||||| || ||| | |||||| | | || | | ||||| | Sbjct 3877033 GCAGAGGCTGATCTTTGCAGGTAAGCAACTCGAGGATGGCCATACTCTTGCGGATTACAG 3876974 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| ||||| | || | || | ||| | || |||||||| Sbjct 3876973 CATCCAGAAAGAGTCAACACTTCACCTTGTCCTTCGTCTTCGCGGTGGTAT 3876923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755449427532800