Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq6 109 4e-19
seq5 107 1e-18
seq2 86.0 4e-12
seq7 84.2 1e-11
seq4 82.4 5e-11
>seq6
Length=25113588
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| || |||| ||| | || ||| ||||| |||||||| || | |
Sbjct 22886245 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCC 22886186
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| | |||| | || ||||||||||| || |||||||| |||| |||||| || ||
Sbjct 22886185 AACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 22886126
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||| || ||||| | | | | || | || | ||| ||
Sbjct 22886125 ATGCCTTCCTTGTCCTGGATC-TTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCAC 22886067
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || |||||||||||||| || ||||||||||||
Sbjct 22886066 CTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 22886018
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| || |||| ||| | || ||| ||||| |||||||| || | |
Sbjct 23069254 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCC 23069195
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| | |||| | || ||||||||||| || |||||||| |||| |||||| || ||
Sbjct 23069194 AACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 23069135
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||| || ||||| | | | | || | || | ||| ||
Sbjct 23069134 ATGCCTTCCTTGTCCTGGATC-TTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCAC 23069076
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || |||||||||||||| || ||||||||||||
Sbjct 23069075 CTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 23069027
Score = 96.9 bits (106), Expect = 2e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
|| ||||| ||||||||||| | || | || ||| | || |||| ||||||||| |||||
Sbjct 23404381 TCCTTCTGGATGTTGTAGTCAGCCAAGGTG-CGGCCATCCTCCAGCTGCTTGCCGGCGAA 23404323
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | || ||||||||| || | || ||||| || ||||| ||| | |
Sbjct 23404322 GATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 23404263
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | || || |||| |||||||| || ||||||||||| |||||
Sbjct 23404262 GTCAATGGTATCAGAGCTCTCTACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCAC 23404203
Query 34378 AAAGATCTGCAT 34389
|||||||||||
Sbjct 23404202 GAAGATCTGCAT 23404191
Score = 95.1 bits (104), Expect = 8e-15
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218
||| || || || || | || |||| ||| | |||| || ||||| |||||||||||
Sbjct 22758337 GAAACCACCACGGAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 22758396
Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--G 34276
| || || | || || | |||||| || ||||| ||||| ||||||||||| |
Sbjct 22758397 AGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGG 22758456
Query 34277 ACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGAT 34336
| || || || |||||||| ||||| ||| | | | | || | || |
Sbjct 22758457 AGGGATAC-CT-TCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTC 22758514
Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || |||| |||||||| || ||||||||||||||||| || ||||||||
Sbjct 22758515 TCTACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAAATCTGCAT 22758567
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| ||||||| ||| | |||| || ||||| ||||||||||| | |
Sbjct 22901347 CCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 22901288
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| | || || | ||| || || ||||| ||||| ||||||||||| ||
Sbjct 22901287 AAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 22901228
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | | | | || | || | |||||
Sbjct 22901227 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCGACT 22901168
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || ||||| || | ||| || || |||||||||||
Sbjct 22901167 TCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 22901121
Score = 89.7 bits (98), Expect = 3e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| ||||||| ||| | || || ||||| ||||||||||| |
Sbjct 23404645 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCT 23404586
Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
| | || ||| | || || | ||| || || ||||| ||||| ||||||||||| ||
Sbjct 23404585 AAGGTG-CGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 23404527
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||||| ||| | || | | || | || | || ||
Sbjct 23404526 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCAC 23404467
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| || ||||| | ||| || ||||||||||||||
Sbjct 23404466 TTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCAT 23404419
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| || |||| ||| | || ||| ||||| || ||||| || | |
Sbjct 22759025 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCC 22759084
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| | |||| | || || | ||| || || |||||||| |||| |||||| || ||
Sbjct 22759085 AACGTACGGCCATCCTCTAGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 22759144
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | | | | || | || | ||| ||
Sbjct 22759145 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACC 22759204
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || ||||||||||| || || ||||||||||||
Sbjct 22759205 TCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 22759252
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219
|| || || || || | || |||| ||| | |||| |||||||| |||||||| |||
Sbjct 22886759 AAACCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCG 22886700
Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279
| || || | || || | |||||| || ||||| ||||| ||||||||||| |
Sbjct 22886699 GCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAA 22886640
Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339
|| | | |||||||| ||||| ||| | | | | || | |||| ||
Sbjct 22886639 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCC 22886580
Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || | |||||||| || ||||| | ||| || || |||||||||||
Sbjct 22886579 ACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 22886530
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219
|| || || || || | || |||| ||| | |||| |||||||| |||||||| |||
Sbjct 23069768 AAACCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCG 23069709
Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279
| || || | || || | |||||| || ||||| ||||| ||||||||||| |
Sbjct 23069708 GCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAA 23069649
Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339
|| | | |||||||| ||||| ||| | | | | || | |||| ||
Sbjct 23069648 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCC 23069589
Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || | |||||||| || ||||| | ||| || || |||||||||||
Sbjct 23069588 ACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 23069539
Score = 82.4 bits (90), Expect = 5e-11
Identities = 164/235 (70%), Gaps = 16/235 (7%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG-- 34220
|| || ||||| | || ||| ||||| | ||| ||| ||||| |||||||| || |
Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251
Query 34221 ACAG-CTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GAC 34278
| || | ||| | || || | ||| || || ||||| ||||||| ||| ||||| |
Sbjct 905252 AAAGTCCGAC---CATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGT 905308
Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC---GA 34335
||| | || |||||||| ||||| ||| | || |||| | | ||| |
Sbjct 905309 GGGATCCCT-TCCTTGTCCTGAATCTTAGCCTTGACAT----TATCAATTGTGTCTGAGC 905363
Query 34336 T-TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || || |||| || ||||| |||||||| || || |||||||||||||||||
Sbjct 905364 TCTCCACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 905418
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||||||||| || ||||| |||| || ||| | || || | ||| || || |||||
Sbjct 905911 TTCTTTCTGGATATTGTAATCGGTCAAGGTACGACCATCTTCTAGCTGTTTACCGGCGAA 905970
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | | ||||||||| || | || |||||||| |||||| ||| | ||
Sbjct 905971 GATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATT 906030
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | || | || || || | |||||||| ||||| ||||| ||||||||
Sbjct 906031 GTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCAC 906090
Query 34378 AAAGATCTGCATC 34390
|||||| ||||||
Sbjct 906091 AAAGATTTGCATC 906103
Score = 82.4 bits (90), Expect = 5e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||| ||| | ||| ||||||||| |||||||| |||| || |||| | ||
Sbjct 10622073 AGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCCAAAGTACGGCCATCT 10622014
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||| || || ||||| || | | |||||||| | || | | ||||||||
Sbjct 10622013 TCTAGCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCTAGAGGAATCCCTTCCTTGTCC 10621954
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||| | || | | || | || | || || || | || |||||
Sbjct 10621953 TGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTC 10621894
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| ||||| ||||||||||| || ||||||
Sbjct 10621893 TTGCCAGTGAGTGTTTTCACAAAAATTTGCATC 10621861
>seq5
Length=21221946
Score = 107 bits (118), Expect = 1e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||| || |||| |||| |||| ||| || || ||||||
Sbjct 20743163 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAA 20743104
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317
|| | ||||||||||| || | | |||||||| ||||| ||||| | ||
Sbjct 20743103 ATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTC-GCTTTCACATT 20743045
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | |||| |||||| || || | || ||||| || || || || ||||||||
Sbjct 20743044 GTCGATGGTGTCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 20742985
Query 34378 AAAGATCTGCATC 34390
||||||||||||
Sbjct 20742984 GAAGATCTGCATC 20742972
>seq2
Length=19320864
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | || ||| ||||| | ||| ||| ||||| |||||||| || | |
Sbjct 9126018 CCACCACGAAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCC 9126077
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| || | || || | ||| || || ||||| ||||| | ||| ||||| ||
Sbjct 9126078 AAAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 9126137
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | || | ||||| ||| ||
Sbjct 9126138 ATCCCCTCCTTGTCCTGGATCTTAGCCTTAACATTATCGATAGTATCGGAACTTTCAACC 9126197
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || |||||||| ||||| || || || ||||||||||||||
Sbjct 9126198 TCCAAAGTTATGGTTTTCCCGGTAAGGGTCTTTACAAAGATCTGCAT 9126244
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | || ||| ||||| | ||| ||| ||||| |||||||| || | |
Sbjct 9214799 CCACCACGAAGGCGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCC 9214858
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| || | || || | ||| || || || || ||||| | ||| ||||| ||
Sbjct 9214859 AAAGTCCGTCCATCCTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 9214918
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||||||||| ||||| |||||| || | || | ||||| ||| ||
Sbjct 9214919 ATCCCCTCCTTGTCCTGGATCTTA-GCTTTAACATTATCGATAGTATCGGAACTTTCAAC 9214977
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || |||||||| ||||| || || |||||||||||||||||
Sbjct 9214978 CTCCAAAGTTATGGTTTTCCCGGTAAGGGTCTTCACAAAGATCTGCAT 9215025
>seq7
Length=24649197
Score = 84.2 bits (92), Expect = 1e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || || ||||| | || || ||||| |||||||| || |
Sbjct 18994128 CCCCCGCGAAGACGAAGGACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCTGCA 18994187
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281
|| || |||| || | |||||| || || || || || | ||||||||| | |||
Sbjct 18994188 AGGGTGCGACCGTCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGAGGG 18994247
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATCGGCTATCGAATCGGTCGATTCGA 34340
| || ||||| || ||||| |||||| ||| | | || | || | || |
Sbjct 18994248 ATCCCT-TCCTTATCTTGAATCTTA-GCTTTAAGATTGTCAATTGTGTCTGAGCTCTCAA 18994305
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| || ||||||||||| ||||| ||||||||||||||||||||
Sbjct 18994306 CCTCCAAAGTTATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 18994354
>seq4
Length=23328337
Score = 82.4 bits (90), Expect = 5e-11
Identities = 164/235 (70%), Gaps = 16/235 (7%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG-- 34220
|| || ||||| | || ||| ||||| | ||| ||| ||||| |||||||| || |
Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172
Query 34221 ACAG-CTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GAC 34278
| || | ||| | || || | ||| || || ||||| ||||||| ||| ||||| |
Sbjct 15771173 AAAGTCCGAC---CATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGT 15771229
Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC---GA 34335
||| | || |||||||| ||||| ||| | || |||| | | ||| |
Sbjct 15771230 GGGATCCCT-TCCTTGTCCTGAATCTTAGCCTTGACAT----TATCAATTGTGTCTGAGC 15771284
Query 34336 T-TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || || |||| || ||||| |||||||| || || |||||||||||||||||
Sbjct 15771285 TCTCCACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 15771339
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||||||||| || ||||| |||| || ||| | || || | ||| || || |||||
Sbjct 15771832 TTCTTTCTGGATATTGTAATCGGCCAAGGTACGACCATCTTCTAGCTGTTTACCGGCGAA 15771891
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| | | ||||||||| || | || |||||||| |||||| ||| | ||
Sbjct 15771892 GATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATT 15771951
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | || | || || || | |||||||| ||||| ||||| ||||||||
Sbjct 15771952 GTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCAC 15772011
Query 34378 AAAGATCTGCATC 34390
|||||| ||||||
Sbjct 15772012 AAAGATTTGCATC 15772024
Score = 82.4 bits (90), Expect = 5e-11
Identities = 134/193 (69%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||| |||| | ||| |||| || | |||||| || |||||
Sbjct 22908921 TTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAA 22908862
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||| | |||||||| || || | | |||||||| ||||| ||| | ||
Sbjct 22908861 AATCAATCGCTGCTGATCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATT 22908802
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
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Sbjct 22908801 GTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCAC 22908742
Query 34378 AAAGATCTGCATC 34390
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Sbjct 22908741 GAAGATCTGCATC 22908729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323069259541760
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