Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq6 109 4e-19 seq5 107 1e-18 seq2 86.0 4e-12 seq7 84.2 1e-11 seq4 82.4 5e-11 >seq6 Length=25113588 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | || ||| ||||| |||||||| || | | Sbjct 22886245 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCC 22886186 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | |||| | || ||||||||||| || |||||||| |||| |||||| || || Sbjct 22886185 AACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 22886126 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||| || ||||| | | | | || | || | ||| || Sbjct 22886125 ATGCCTTCCTTGTCCTGGATC-TTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCAC 22886067 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || |||||||||||||| || |||||||||||| Sbjct 22886066 CTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 22886018 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | || ||| ||||| |||||||| || | | Sbjct 23069254 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGCC 23069195 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | |||| | || ||||||||||| || |||||||| |||| |||||| || || Sbjct 23069194 AACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 23069135 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||| || ||||| | | | | || | || | ||| || Sbjct 23069134 ATGCCTTCCTTGTCCTGGATC-TTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCAC 23069076 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || |||||||||||||| || |||||||||||| Sbjct 23069075 CTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 23069027 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 || ||||| ||||||||||| | || | || ||| | || |||| ||||||||| ||||| Sbjct 23404381 TCCTTCTGGATGTTGTAGTCAGCCAAGGTG-CGGCCATCCTCCAGCTGCTTGCCGGCGAA 23404323 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | || ||||||||| || | || ||||| || ||||| ||| | | Sbjct 23404322 GATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 23404263 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | ||| | || || |||| |||||||| || ||||||||||| ||||| Sbjct 23404262 GTCAATGGTATCAGAGCTCTCTACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCAC 23404203 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 23404202 GAAGATCTGCAT 23404191 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | || |||| ||| | |||| || ||||| ||||||||||| Sbjct 22758337 GAAACCACCACGGAGACGGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 22758396 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--G 34276 | || || | || || | |||||| || ||||| ||||| ||||||||||| | Sbjct 22758397 AGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGG 22758456 Query 34277 ACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGAT 34336 | || || || |||||||| ||||| ||| | | | | || | || | Sbjct 22758457 AGGGATAC-CT-TCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTC 22758514 Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || |||| |||||||| || ||||||||||||||||| || |||||||| Sbjct 22758515 TCTACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTCACGAAAATCTGCAT 22758567 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | |||| || ||||| ||||||||||| | | Sbjct 22901347 CCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 22901288 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||| || || ||||| ||||| ||||||||||| || Sbjct 22901287 AAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 22901228 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | || | ||||| Sbjct 22901227 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCGACT 22901168 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| || | ||| || || ||||||||||| Sbjct 22901167 TCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 22901121 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| ||||||| ||| | || || ||||| ||||||||||| | Sbjct 23404645 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCT 23404586 Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 | | || ||| | || || | ||| || || ||||| ||||| ||||||||||| || Sbjct 23404585 AAGGTG-CGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 23404527 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||| | || | | || | || | || || Sbjct 23404526 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCAC 23404467 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| || ||||| | ||| || |||||||||||||| Sbjct 23404466 TTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCAT 23404419 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || |||| ||| | || ||| ||||| || ||||| || | | Sbjct 22759025 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGCC 22759084 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | |||| | || || | ||| || || |||||||| |||| |||||| || || Sbjct 22759085 AACGTACGGCCATCCTCTAGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGGA 22759144 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | | | | || | || | ||| || Sbjct 22759145 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACC 22759204 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || ||||||||||| || || |||||||||||| Sbjct 22759205 TCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 22759252 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | || |||| ||| | |||| |||||||| |||||||| ||| Sbjct 22886759 AAACCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCG 22886700 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || || | || || | |||||| || ||||| ||||| ||||||||||| | Sbjct 22886699 GCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAA 22886640 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | |||||||| ||||| ||| | | | | || | |||| || Sbjct 22886639 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCC 22886580 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||||| || ||||| | ||| || || ||||||||||| Sbjct 22886579 ACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 22886530 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || || || | || |||| ||| | |||| |||||||| |||||||| ||| Sbjct 23069768 AAACCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCG 23069709 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 | || || | || || | |||||| || ||||| ||||| ||||||||||| | Sbjct 23069708 GCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAA 23069649 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCG 34339 || | | |||||||| ||||| ||| | | | | || | |||| || Sbjct 23069648 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCC 23069589 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||||| || ||||| | ||| || || ||||||||||| Sbjct 23069588 ACTTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 23069539 Score = 82.4 bits (90), Expect = 5e-11 Identities = 164/235 (70%), Gaps = 16/235 (7%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG-- 34220 || || ||||| | || ||| ||||| | ||| ||| ||||| |||||||| || | Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251 Query 34221 ACAG-CTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GAC 34278 | || | ||| | || || | ||| || || ||||| ||||||| ||| ||||| | Sbjct 905252 AAAGTCCGAC---CATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGT 905308 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC---GA 34335 ||| | || |||||||| ||||| ||| | || |||| | | ||| | Sbjct 905309 GGGATCCCT-TCCTTGTCCTGAATCTTAGCCTTGACAT----TATCAATTGTGTCTGAGC 905363 Query 34336 T-TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || |||| || ||||| |||||||| || || ||||||||||||||||| Sbjct 905364 TCTCCACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 905418 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| || ||||| |||| || ||| | || || | ||| || || ||||| Sbjct 905911 TTCTTTCTGGATATTGTAATCGGTCAAGGTACGACCATCTTCTAGCTGTTTACCGGCGAA 905970 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | | ||||||||| || | || |||||||| |||||| ||| | || Sbjct 905971 GATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATT 906030 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || || || | |||||||| ||||| ||||| |||||||| Sbjct 906031 GTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCAC 906090 Query 34378 AAAGATCTGCATC 34390 |||||| |||||| Sbjct 906091 AAAGATTTGCATC 906103 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| ||||||||| |||||||| |||| || |||| | || Sbjct 10622073 AGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCCAAAGTACGGCCATCT 10622014 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| || || ||||| || | | |||||||| | || | | |||||||| Sbjct 10622013 TCTAGCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCTAGAGGAATCCCTTCCTTGTCC 10621954 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | || | | || | || | || || || | || ||||| Sbjct 10621953 TGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTC 10621894 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| ||||||||||| || |||||| Sbjct 10621893 TTGCCAGTGAGTGTTTTCACAAAAATTTGCATC 10621861 >seq5 Length=21221946 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || |||| |||| |||| ||| || || |||||| Sbjct 20743163 TCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAA 20743104 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || | ||||||||||| || | | |||||||| ||||| ||||| | || Sbjct 20743103 ATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTC-GCTTTCACATT 20743045 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| |||||| || || | || ||||| || || || || |||||||| Sbjct 20743044 GTCGATGGTGTCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCAC 20742985 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 20742984 GAAGATCTGCATC 20742972 >seq2 Length=19320864 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||| ||||| | ||| ||| ||||| |||||||| || | | Sbjct 9126018 CCACCACGAAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCC 9126077 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | || | || || | ||| || || ||||| ||||| | ||| ||||| || Sbjct 9126078 AAAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 9126137 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | || | ||||| ||| || Sbjct 9126138 ATCCCCTCCTTGTCCTGGATCTTAGCCTTAACATTATCGATAGTATCGGAACTTTCAACC 9126197 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || |||||||| ||||| || || || |||||||||||||| Sbjct 9126198 TCCAAAGTTATGGTTTTCCCGGTAAGGGTCTTTACAAAGATCTGCAT 9126244 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || ||| ||||| | ||| ||| ||||| |||||||| || | | Sbjct 9214799 CCACCACGAAGGCGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCC 9214858 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | || | || || | ||| || || || || ||||| | ||| ||||| || Sbjct 9214859 AAAGTCCGTCCATCCTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGG 9214918 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAG-ATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||||| |||||| || | || | ||||| ||| || Sbjct 9214919 ATCCCCTCCTTGTCCTGGATCTTA-GCTTTAACATTATCGATAGTATCGGAACTTTCAAC 9214977 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || |||||||| ||||| || || ||||||||||||||||| Sbjct 9214978 CTCCAAAGTTATGGTTTTCCCGGTAAGGGTCTTCACAAAGATCTGCAT 9215025 >seq7 Length=24649197 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| |||||||| || | Sbjct 18994128 CCCCCGCGAAGACGAAGGACAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCTGCA 18994187 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || || |||| || | |||||| || || || || || | ||||||||| | ||| Sbjct 18994188 AGGGTGCGACCGTCCTCAAGCTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGAGGG 18994247 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||| || ||||| |||||| ||| | | || | || | || | Sbjct 18994248 ATCCCT-TCCTTATCTTGAATCTTA-GCTTTAAGATTGTCAATTGTGTCTGAGCTCTCAA 18994305 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || ||||||||||| ||||| |||||||||||||||||||| Sbjct 18994306 CCTCCAAAGTTATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 18994354 >seq4 Length=23328337 Score = 82.4 bits (90), Expect = 5e-11 Identities = 164/235 (70%), Gaps = 16/235 (7%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG-- 34220 || || ||||| | || ||| ||||| | ||| ||| ||||| |||||||| || | Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172 Query 34221 ACAG-CTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GAC 34278 | || | ||| | || || | ||| || || ||||| ||||||| ||| ||||| | Sbjct 15771173 AAAGTCCGAC---CATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGT 15771229 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC---GA 34335 ||| | || |||||||| ||||| ||| | || |||| | | ||| | Sbjct 15771230 GGGATCCCT-TCCTTGTCCTGAATCTTAGCCTTGACAT----TATCAATTGTGTCTGAGC 15771284 Query 34336 T-TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || || |||| || ||||| |||||||| || || ||||||||||||||||| Sbjct 15771285 TCTCCACCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 15771339 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| || ||||| |||| || ||| | || || | ||| || || ||||| Sbjct 15771832 TTCTTTCTGGATATTGTAATCGGCCAAGGTACGACCATCTTCTAGCTGTTTACCGGCGAA 15771891 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || | | ||||||||| || | || |||||||| |||||| ||| | || Sbjct 15771892 GATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTAACATT 15771951 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || || || | |||||||| ||||| ||||| |||||||| Sbjct 15771952 GTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCAC 15772011 Query 34378 AAAGATCTGCATC 34390 |||||| |||||| Sbjct 15772012 AAAGATTTGCATC 15772024 Score = 82.4 bits (90), Expect = 5e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||| |||| | ||| |||| || | |||||| || ||||| Sbjct 22908921 TTCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAA 22908862 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| | |||||||| || || | | |||||||| ||||| ||| | || Sbjct 22908861 AATCAATCGCTGCTGATCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATT 22908802 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | || | || ||||| || | ||||| || || || || || |||||||| Sbjct 22908801 GTCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCAC 22908742 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 22908741 GAAGATCTGCATC 22908729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069259541760