Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
>seq1
Length=33132539
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| || || |||||| |||| || || || |||||| | || || |||||
Sbjct 10396898 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCATCA 10396957
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | || | ||| || | || ||| | |||||||| | || || |||
Sbjct 10396958 GACACAATCGACAATGTGAAAGCGAAGATTCAAGACAAAGAAGGAATCCCACCGGATCAG 10397017
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
||||| ||||| | || || |||||| |||||||| | || | ||||||| |
Sbjct 10397018 CAACGGTTAATCTTCGCCGGAAAACAATTGGAAGATGGAAGAACACTCGCTGATTACAAC 10397077
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
|| ||||||||| | ||||||||||| ||| | || || | ||||||
Sbjct 10397078 ATTCAGAAAGAGTCGACGCTTCATTTGGTGCTTCGTCTGAGAGGAGGT 10397125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418300451736320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |