Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq7 154 3e-32
>seq7
Length=24649197
Score = 154 bits (170), Expect = 3e-32
Identities = 155/198 (78%), Gaps = 5/198 (3%)
Strand=Plus/Plus
Query 35518 AGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACC 35576
|||| ||||| |||||| || |||| || ||| |||| ||||||||| |||||| | |
Sbjct 2728453 AGAACAATCCTGATGATCGACGGATTATAATGTCGGCTTGGAATCCTTCTGATCTTAAGC 2728512
Query 35577 TTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGT 35636
| ||||| |||||||||||||||||| ||| || |||||||| || |||||||| |||
Sbjct 2728513 TGATGGCACTTCCTCCATGCCACATGTTTGCACAGTTTTATGTTGCAGATGGAGAACTGT 2728572
Query 35637 CGTGCCAGTTGTATCAGCG--AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
| || || |||||||||| ||| || ||| || | ||||| || || || |||||
Sbjct 2728573 CATGTCAAATGTATCAGCGCTCAGCCGATATG--GGTCTCGGCGTACCGTTTAACATTGC 2728630
Query 35695 ATCATACTCTCTTCTGAC 35712
||||||||| ||||| ||
Sbjct 2728631 ATCATACTCCCTTCTTAC 2728648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989575175384680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |