Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq6 111 2e-19 seq4 98.7 1e-15 seq2 95.1 1e-14 seq1 93.3 4e-14 seq7 87.8 2e-12 >seq6 Length=25113588 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| ||||||||||| || ||||| |||||| | Sbjct 22886756 CCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCC 22886697 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| |||| ||||| ||||| || ||| Sbjct 22886696 AAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAAGGG 22886637 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| || || | | || | ||||||| | |||||| Sbjct 22886636 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACT 22886577 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 |||| ||| | ||||| |||||||| || || ||||| || |||||| || Sbjct 22886576 TCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCATACCT 22886526 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||||| ||||||||||| || ||||| |||||| | Sbjct 23069765 CCACCACGGAGACGGAGGACCAAGTGAAGAGTAGACTCTTTCTGGATGTTGTAATCGGCC 23069706 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || ||||| |||| ||||| ||||| || ||| Sbjct 23069705 AAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCAAAGGG 23069646 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||| || || | | || | ||||||| | |||||| Sbjct 23069645 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCCACT 23069586 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 |||| ||| | ||||| |||||||| || || ||||| || |||||| || Sbjct 23069585 TCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCATACCT 23069535 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| | ||| ||||| | || || ||||| || || || |||||| || Sbjct 905876 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGTC 905935 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| ||||||||||| || |||| | | ||||| || ||||| Sbjct 905936 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 905995 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| | |||| ||| | | || | ||||| | | ||| || Sbjct 905996 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 906054 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||| || | ||||| || || |||||||| Sbjct 906055 CTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 906102 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| | ||| ||||| | || || ||||| || ||||| |||||| | Sbjct 10622088 CCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCC 10622029 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| ||||||||||| || |||| | | |||||| || |||| Sbjct 10622028 AAAGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCTAGAGGA 10621969 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | |||| ||| | | || | ||||| | | ||| || Sbjct 10621968 ATCCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAAC 10621910 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||| || | ||||| || || |||||||| Sbjct 10621909 CTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACAAAAATTTGCAT 10621862 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || || || | |||||| || | ||||| ||||| || || |||||||| ||||| ||| Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || || |||||||||||||| |||| || | || || || || || Sbjct 905252 AAA-GTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | || | | || | |||||| | | ||||| Sbjct 905311 GATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCA 905369 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | || | ||||||||||| | || || || || || |||||| Sbjct 905370 CCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 905419 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGAGTCTTCGAGCTGTTTACC 139626 |||||||||||||| ||||| ||||| ||| | ||| | || || |||||||| || Sbjct 10622514 GTAGACTCTTTTTGGATGTTGTAATCAGCT-AGTGTCCGACCATCCTCAAGCTGTTTCCC 10622456 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 ||| |||| || | ||||| || || || || ||||| ||||| ||| | || | | Sbjct 10622455 AGCGAAGATAAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCC-TGAATCTTAGCCT 10622397 Query 139687 TAGCTGTTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 | | | || | ||||| | | ||| ||||| | || | ||||||||||||| | Sbjct 10622396 TGACATTATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCGGTCAGGG 10622337 Query 139746 TTTTTACGAATATTTGCATA 139765 | || ||||| || |||||| Sbjct 10622336 TCTTCACGAAAATCTGCATA 10622317 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| ||||| ||||| ||||| | || | |||||||||||||| ||| Sbjct 8748810 GTAGACTCCTTTTGGATGTTGTAATCTGCAAGAGTCCGACCATCTTCGAGCTGTTTCCCA 8748869 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| |||| || | ||||| || || || || ||||| ||||| ||| | |||| || Sbjct 8748870 GCAAAGATGAGTCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTC-TTGAATCTTTGCCTT 8748928 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | || | |||||| | | ||| ||||| | || | |||||||| || | || Sbjct 8748929 GACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATAGTCTTGCCAGTTAGGGT 8748988 Query 139747 TTTTACGAATATTTGCATA 139765 || || || || |||||| Sbjct 8748989 CTTCACAAAGATCTGCATA 8749007 Score = 82.4 bits (90), Expect = 8e-11 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | |||||| || | ||||| || || || || ||||| || ||||| | Sbjct 10622773 GCCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATC-CG 10622715 Query 139597 CATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || | | ||| || || |||||||||||||| |||| || | |||||||| || Sbjct 10622714 CAA-GAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGATCTGGT 10622656 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713 || || ||||||||||| ||| |||| | || | | || | |||||| | ||| Sbjct 10622655 GGGATCCCTTCTTTGTC-CTGAATTTTGGCCTTGACATTATCGATTGTGTCTGAACTCTC 10622597 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | || | || || ||||| | || || || || ||||||||| Sbjct 10622596 AACCTCCAAAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCATA 10622545 >seq4 Length=23328337 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| | ||| ||||| | || || ||||| || || || |||||| | Sbjct 15771797 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 15771856 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| ||||||||||| || |||| | | ||||| || ||||| Sbjct 15771857 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 15771916 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| | |||| ||| | | || | ||||| | | ||| || Sbjct 15771917 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 15771975 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||| || | ||||| || || |||||||| Sbjct 15771976 CTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 15772023 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || || || | |||||| || | ||||| ||||| || || |||||||| ||||| ||| Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || || |||||||||||||| |||| || | || || || || || Sbjct 15771173 AAA-GTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | || | | || | |||||| | | ||||| Sbjct 15771232 GATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCA 15771290 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | || | ||||||||||| | || || || || || |||||| Sbjct 15771291 CCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 15771340 >seq2 Length=19320864 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || || || | ||| | ||| ||||||| || ||||| || || ||||| ||||| ||| Sbjct 9125790 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT 9125849 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || ||||||||||||||||| |||| || | || || || || || Sbjct 9125850 AAA-GTCCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGG 9125908 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCA 139715 || || || ||||| ||| | || | || | | || | |||||| | | ||| | Sbjct 9125909 GATCCCCTCCTTGTCC-TGAATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAA 9125967 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| | || | |||||||| ||||| ||||| || |||||||||||| Sbjct 9125968 CCTCCAACGTAATGGTCTTGCCTGTCAAAGTTTTCACAAATATTTGCATA 9126017 Score = 89.7 bits (98), Expect = 5e-13 Identities = 143/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 |||||||| ||||| ||||| ||||| | |||| || | ||||| ||||| ||||| Sbjct 9215057 GTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGTCCA-TCTTCAAGCTGCTTACC 9215115 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 ||| |||| || | || || || || || || || || ||||| ||| | || | | Sbjct 9215116 GGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCC-TGAATCTTAGCCT 9215174 Query 139687 TAGCTGT-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 | | | || | |||||| | | ||| ||||| | || | |||||||| ||||| | Sbjct 9215175 TGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTTGCCTGTCAAAG 9215234 Query 139746 TTTTTACGAATATTTGCATA 139765 |||| || |||||||||||| Sbjct 9215235 TTTTCACAAATATTTGCATA 9215254 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | || || |||| ||||||||||| || || || ||||| Sbjct 9126702 CCACCTCTAAGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCG 9126761 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| ||| || ||||| ||||||||| |||| || | |||||||| ||||| Sbjct 9126762 AGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGG 9126821 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | |||| | | || | || || | || || Sbjct 9126822 ATTCCTTCCTTATC-CTGAATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAAC 9126880 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | || ||||| |||||||| || || || || |||||| Sbjct 9126881 CTCCAAAGTAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCATA 9126929 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| ||||||| || ||||| || || ||||| ||||| | Sbjct 9214571 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCC 9214630 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || ||||||||||||||||| |||| || | || || || || || Sbjct 9214631 AAAGTCCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGCGGG 9214690 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | || | | || | ||||| | | ||| || Sbjct 9214691 ATCCCCTCCTTGTC-CTGAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTCTCAAC 9214749 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | |||||||| ||||| || || || || ||||||||| Sbjct 9214750 CTCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATTTGCATA 9214798 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | || || |||| ||||||||||| || || || ||||| Sbjct 9215483 CCACCTCTAAGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCG 9215542 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| ||| || ||||| ||||||||| |||| || | |||||||| ||||| Sbjct 9215543 AGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGG 9215602 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| | || | |||| | | || | || || | || || Sbjct 9215603 ATTCCTTCCTTATC-CTGAATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAAC 9215661 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | || | || ||||| |||||||| || || || || |||||| Sbjct 9215662 CTCCAAAGTAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCATA 9215710 >seq1 Length=33132539 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | || || |||| ||| |||||||| |||||||| ||||| Sbjct 10397124 CCTCCTCTCAGACGAAGCACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGCG 10397065 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||| || ||||| | ||||| || || |||| | ||||||||||| || || Sbjct 10397064 AGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATTAACCGTTGCTGATCCGGTGGG 10397005 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| | || | ||| | | || | |||||| | | || || Sbjct 10397004 ATTCCTTCTTTGTC-TTGAATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAAC 10396946 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| || || | ||||| ||||| || ||||| Sbjct 10396945 CTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 10396898 >seq7 Length=24649197 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 || || || | ||| | ||| | ||||| || |||||||| ||||| || ||||| ||| Sbjct 18993444 CCTCCACGGAGACGGAGAACAAGGTGAAGAGTCGACTCTTTCTGAATATTGTAATCCGCT 18993503 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || ||||||||||| || ||| |||| || | ||||| || ||| Sbjct 18993504 AAA-GTACGACCATCCTCGAGCTGTTTTCCGGCAAAGATTAGCCTCTGCTGGTCCGGAAC 18993562 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 ||| ||||||||||| ||| | || | |||| | || | || || | | ||| | Sbjct 18993563 TATCCCTTCTTTGTC-CTGAATCTTGGCCTTTACGTTGTCAATCGTATCAGAGCTCTCGA 18993621 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| || | |||||||| ||||| || || || || || ||||| Sbjct 18993622 CCTCAAGTGTGATGGTCTTGCCCGTCAAAGTCTTGACAAAAATCTGCAT 18993670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496059684243200