Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq6 100 2e-16 seq4 100 2e-16 seq2 91.5 1e-13 seq1 86.0 5e-12 seq7 84.2 2e-11 >seq6 Length=25113588 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | | ||||| || ||||| || |||||| || ||||||||||| || Sbjct 22901120 ACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGC 22901061 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||||| ||| || ||| || | || || | |||||| ||| || Sbjct 22901060 CAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 22901001 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || |||||| ||| || || ||| | | || || || | | |||| Sbjct 22901000 GATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCAC 22900941 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || ||||| || ||||||||||| ||||||||||||||||| Sbjct 22900940 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| |||||||| || | ||||| |||||||| || || | Sbjct 22758376 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 22758435 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||| ||| || | || |||||||||| || || ||| | Sbjct 22758436 GATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 22758495 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | ||||| || | ||| ||| | || ||||| || ||||||||||||||||| Sbjct 22758496 GTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTCAC 22758555 Query 48715 AAAAATCTGCAT 48726 ||||||||||| Sbjct 22758556 GAAAATCTGCAT 22758567 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || || || || ||| ||||| || |||||||||||||| Sbjct 22886246 ACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGC 22886187 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||||| |||||| ||| || |||| | | |||||||||| || Sbjct 22886186 CAACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGG 22886127 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | | |||||||||| || || |||| | | | | ||||| || | ||| Sbjct 22886126 AATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 22886068 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || || || || |||||||||||||| || || ||||||||| Sbjct 22886067 CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 22886018 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || || || || ||| ||||| || |||||||||||||| Sbjct 23069255 ACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGC 23069196 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||||| |||||| ||| || |||| | | |||||||||| || Sbjct 23069195 CAACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGG 23069136 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677 | | |||||||||| || || |||| | | | | ||||| || | ||| Sbjct 23069135 AATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 23069077 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || || || || |||||||||||||| || || ||||||||| Sbjct 23069076 CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 23069027 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || ||||| || ||||||||| || ||||| |||||||| || | ||||| Sbjct 22901558 CACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTC 22901499 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||| || || || | || | ||||||||| ||| || | || |||||||||| Sbjct 22901498 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 22901439 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | ||||| || | ||| ||||| || ||||| || Sbjct 22901438 GATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTT 22901379 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| ||||| ||||| ||||||||||| Sbjct 22901378 CCCGGTCAGAGTCTTCACGAAAATCTGCAT 22901349 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || || || ||||| || |||||| || |||||||| |||||||| || | ||| Sbjct 23404402 AAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCC 23404343 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 ||||||||||| ||| || | || || | |||||| ||| || | | |||||| ||| Sbjct 23404342 TCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 23404283 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 || || ||| | | |||||||| | ||| ||| | || ||||| Sbjct 23404282 TGGATCTTGGCCTTCACGTTGTCAATGGTATCAGAGCTCTCTACCTCCAAGGTGATGGTC 23404223 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||||||||| ||||| || |||||||| Sbjct 23404222 TTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 23404191 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 || || || ||||||||||| ||||| || | || || ||||| |||||| || | Sbjct 10622052 TCTTTCTGGATGTTGTAATCGGCCAAAGTACGGCCATCTTCTAGCTGTTTACCGGCGAAG 10621993 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 ||||| | ||||| || | || | | |||||||||| ||| || ||| | | Sbjct 10621992 ATTAATCTTTGCTGGTCTAGAGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTG 10621933 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| ||||| || ||||| || || ||||| ||||||||| Sbjct 10621932 TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACA 10621873 Query 48716 AAAATCTGCATC 48727 ||||| |||||| Sbjct 10621872 AAAATTTGCATC 10621861 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| |||| | |||||| |||||||| || |||||| ||||||||||| ||||| Sbjct 22900892 ACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGC 22900833 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || |||| || || ||||| ||| || | || || | |||||| ||| || Sbjct 22900832 CAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 22900773 Query 48619 CACACTTTCCTTGTCC 48634 | || || |||||| Sbjct 22900772 AATACCCTCTTTGTCC 22900757 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | ||||| | ||||| || ||||| ||||||||||||||||| Sbjct 905191 ACCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGC 905250 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || | ||||| ||||| ||||| || | || | | ||| || || || Sbjct 905251 TAAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||||| ||| || ||||| | | || || || | |||| Sbjct 905311 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 905370 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | |||||||| || ||||| || || |||||||| |||||||| Sbjct 905371 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 905418 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||| || || ||| || || |||||||| ||||| | || ||||||| Sbjct 905437 CACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTC 905496 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||||||| | | || | | ||| || ||| || | | |||||||||| Sbjct 905497 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 905556 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || |||| | | ||||| || | | ||| ||||| || || ||||| Sbjct 905557 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 905616 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| ||||| || |||||||| |||||||| Sbjct 905617 ACCAGTGAGGGTCTTCACAAAGATCTGCAT 905646 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||| ||||| || || || || |||||||||||||| || | || || Sbjct 8749482 ACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCCAAGGTACGGCCATCTTCT 8749541 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 ||||||||||| || | || || | ||||| ||| || | | |||||||||| Sbjct 8749542 AGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 8749601 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 || || ||| | | | ||||| || | ||| ||||| || ||||| ||| Sbjct 8749602 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTA 8749661 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 || ||||| ||||||||||||| |||||| Sbjct 8749662 CCAGTGAGTGTTTTCACAAAAACTTGCATC 8749691 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || | ||| | || || || || ||| ||||| || || ||||||||||| Sbjct 22759024 ACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGC 22759083 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | ||||| ||||| || ||| || |||| | | |||||||||| || Sbjct 22759084 CAACGTACGGCCATCCTCTAGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGG 22759143 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | | |||||||||| || || ||| | | | || ||||| || | ||| Sbjct 22759144 AATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCG--ATGGTGTCAGAGCTTTCC 22759201 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || || || || ||||||||||| || || || ||||||||| Sbjct 22759202 ACCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 22759252 >seq4 Length=23328337 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || ||||||||||| || || || |||| || |||||||| ||| || || Sbjct 22908920 TCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAA 22908861 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || || |||||||||||| || | || ||||||||| || || ||||| | Sbjct 22908860 ATCAATCGCTGCTGATCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22908801 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||||| ||||| || || || || || || || |||||||| Sbjct 22908800 TCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACG 22908741 Query 48716 AAAATCTGCATCGTGTCTTG 48735 || ||||||||| | | ||| Sbjct 22908740 AAGATCTGCATCTTTTTTTG 22908721 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || |||| | ||||| | ||||| || ||||| ||||||||||||||||| Sbjct 15771112 ACCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGC 15771171 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || || | ||||| ||||| ||||| || | || | | ||| || || || Sbjct 15771172 TAAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | |||||||||| ||| || ||||| | | || || || | |||| Sbjct 15771232 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 15771291 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | |||||||| || ||||| || || |||||||| |||||||| Sbjct 15771292 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 15771339 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||| || || ||| || || |||||||| ||||| | || ||||||| Sbjct 15771358 CACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTC 15771417 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||||||| | | || | | ||| || ||| || | | |||||||||| Sbjct 15771418 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 15771477 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || |||| | | ||||| || | | ||| ||||| || || ||||| Sbjct 15771478 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 15771537 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| ||||| || |||||||| |||||||| Sbjct 15771538 ACCAGTGAGGGTCTTCACAAAGATCTGCAT 15771567 >seq2 Length=19320864 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||| || || ||| ||||| |||||||||||||| || || | ||||| Sbjct 9126491 CACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCTAAAGTACGACCATCCTC 9126550 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||||||| | | || | | ||| |||||| || | || ||||||||| Sbjct 9126551 AAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGGGATACCTTCCTTGTCTTG 9126610 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || ||||| | | || || || | ||| ||| | || ||||| || Sbjct 9126611 AATCTTTGCCTTGACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTT 9126670 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || ||||||||||||||||| Sbjct 9126671 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 9126700 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||||||||| ||| || || || ||||||||||| | | || ||||||| Sbjct 9126719 CACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTC 9126778 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| | | || | | |||||||||| || | | |||||| ||| Sbjct 9126779 AAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 9126838 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || || | | | || ||||| | | || ||| | || |||||||| Sbjct 9126839 AATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTT 9126898 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || | || ||||||||||||||||| Sbjct 9126899 GCCAGTCAACGTCTTCACAAAAATCTGCAT 9126928 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| ||||||||||| ||| || || || ||||||||||| | | || ||||||| Sbjct 9215500 CACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTC 9215559 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||| | | || | | |||||||||| || | | |||||| ||| Sbjct 9215560 AAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 9215619 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || || | | | || ||||| | | || ||| | || |||||||| Sbjct 9215620 AATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTT 9215679 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || | || ||||||||||||||||| Sbjct 9215680 GCCAGTCAACGTCTTCACAAAAATCTGCAT 9215709 >seq1 Length=33132539 Score = 86.0 bits (94), Expect = 5e-12 Identities = 173/253 (68%), Gaps = 9/253 (4%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| | || | | ||| |||||||| || ||| || ||||||||||||||||| Sbjct 10397125 ACCTCCTCTCAGACGAAGCACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGC 10397066 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | | || | || |||| || || ||| || | ||||| || ||||||||| || Sbjct 10397065 GAGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATTAACCGTTGCTGATCCGGTGG 10397006 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTT---GATAGACGCTATGGTATCGGTAGACTC 48675 | | ||| ||||| ||| ||| |||| || | || || || || | || || Sbjct 10397005 GATTCCTTCTTTGTCTTGAATCTTC-GCTTTCACATTGTCG--ATTGTGTCTGATGATTC 10396949 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCA---TCGTGTC 48732 ||| | ||||| || || || || || |||||||| || ||||||| || ||| Sbjct 10396948 AACCTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTCTTGTT 10396889 Query 48733 TTGATCGAAGAAA 48745 | | ||||||||| Sbjct 10396888 TCGCTCGAAGAAA 10396876 >seq7 Length=24649197 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 ||||| || |||||| |||||||||||||| || || || || ||||||| ||||| Sbjct 18994152 TGAAGGGTCGACTCCTTCTGAATGTTGTAATCTGC-AAGGGTGCGACCGTCCTCAAGCTG 18994210 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||||||| | | || | | |||||| ||| || | | |||||| || ||| || Sbjct 18994211 CTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTT 18994270 Query 48643 CTGCTTGATAGACGCT--ATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 |||| | ||| | || || || | ||| ||| | ||||||||||| || Sbjct 18994271 A-GCTTTA-AGATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCA 18994328 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| ||||||||||| |||||||| Sbjct 18994329 GTGAGGGTTTTCACAAAGATCTGCAT 18994354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247626736696