Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq6 100 2e-16
seq4 100 2e-16
seq2 91.5 1e-13
seq1 86.0 5e-12
seq7 84.2 2e-11
>seq6
Length=25113588
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| || | | ||||| || ||||| || |||||| || ||||||||||| ||
Sbjct 22901120 ACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGC 22901061
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | ||||||| ||| || ||| || | || || | |||||| ||| ||
Sbjct 22901060 CAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 22901001
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||| ||| || || ||| | | || || || | | ||||
Sbjct 22901000 GATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCAC 22900941
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || ||||| || ||||||||||| |||||||||||||||||
Sbjct 22900940 CTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || |||||||| |||||||| || | ||||| |||||||| || || |
Sbjct 22758376 CTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCGAA 22758435
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| | ||||||||| ||| || | || |||||||||| || || ||| |
Sbjct 22758436 GATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 22758495
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| || | ||| ||| | || ||||| || |||||||||||||||||
Sbjct 22758496 GTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTCAC 22758555
Query 48715 AAAAATCTGCAT 48726
|||||||||||
Sbjct 22758556 GAAAATCTGCAT 22758567
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | ||| | || || || || ||| ||||| || ||||||||||||||
Sbjct 22886246 ACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGC 22886187
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | ||||||| |||||| ||| || |||| | | |||||||||| ||
Sbjct 22886186 CAACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGG 22886127
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677
| | |||||||||| || || |||| | | | | ||||| || | |||
Sbjct 22886126 AATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 22886068
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || || || || |||||||||||||| || || |||||||||
Sbjct 22886067 CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 22886018
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | ||| | || || || || ||| ||||| || ||||||||||||||
Sbjct 23069255 ACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCAGC 23069196
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | ||||||| |||||| ||| || |||| | | |||||||||| ||
Sbjct 23069195 CAACGTACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGG 23069136
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACG-CTATGGTATCGGTAGACTCCG 48677
| | |||||||||| || || |||| | | | | ||||| || | |||
Sbjct 23069135 AATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 23069077
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || || || || |||||||||||||| || || |||||||||
Sbjct 23069076 CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 23069027
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| || ||||| || ||||||||| || ||||| |||||||| || | |||||
Sbjct 22901558 CACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTC 22901499
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||| || || || | || | ||||||||| ||| || | || ||||||||||
Sbjct 22901498 AAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 22901439
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| || ||| | | ||||| || | ||| ||||| || ||||| ||
Sbjct 22901438 GATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTT 22901379
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| ||||| ||||| |||||||||||
Sbjct 22901378 CCCGGTCAGAGTCTTCACGAAAATCTGCAT 22901349
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574
|| || || ||||| || |||||| || |||||||| |||||||| || | |||
Sbjct 23404402 AAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCC 23404343
Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634
||||||||||| ||| || | || || | |||||| ||| || | | |||||| |||
Sbjct 23404342 TCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTATCC 23404283
Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694
|| || ||| | | |||||||| | ||| ||| | || |||||
Sbjct 23404282 TGGATCTTGGCCTTCACGTTGTCAATGGTATCAGAGCTCTCTACCTCCAAGGTGATGGTC 23404223
Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||||||||| ||||| || ||||||||
Sbjct 23404222 TTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 23404191
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
|| || || ||||||||||| ||||| || | || || ||||| |||||| || |
Sbjct 10622052 TCTTTCTGGATGTTGTAATCGGCCAAAGTACGGCCATCTTCTAGCTGTTTACCGGCGAAG 10621993
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
||||| | ||||| || | || | | |||||||||| ||| || ||| | |
Sbjct 10621992 ATTAATCTTTGCTGGTCTAGAGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTG 10621933
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | ||| ||||| || ||||| || || ||||| |||||||||
Sbjct 10621932 TCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACA 10621873
Query 48716 AAAATCTGCATC 48727
||||| ||||||
Sbjct 10621872 AAAATTTGCATC 10621861
Score = 84.2 bits (92), Expect = 2e-11
Identities = 100/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| |||| | |||||| |||||||| || |||||| ||||||||||| |||||
Sbjct 22900892 ACCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGC 22900833
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| || || ||||| ||| || | || || | |||||| ||| ||
Sbjct 22900832 CAAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 22900773
Query 48619 CACACTTTCCTTGTCC 48634
| || || ||||||
Sbjct 22900772 AATACCCTCTTTGTCC 22900757
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || |||| | ||||| | ||||| || ||||| |||||||||||||||||
Sbjct 905191 ACCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGC 905250
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | ||||| ||||| ||||| || | || | | ||| || || ||
Sbjct 905251 TAAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||||||| ||| || ||||| | | || || || | ||||
Sbjct 905311 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 905370
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | |||||||| || ||||| || || |||||||| ||||||||
Sbjct 905371 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 905418
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| ||||| || || ||| || || |||||||| ||||| | || |||||||
Sbjct 905437 CACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTC 905496
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||||||| | | || | | ||| || ||| || | | ||||||||||
Sbjct 905497 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 905556
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| || |||| | | ||||| || | | ||| ||||| || || |||||
Sbjct 905557 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 905616
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| ||||| || |||||||| ||||||||
Sbjct 905617 ACCAGTGAGGGTCTTCACAAAGATCTGCAT 905646
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| ||||| ||||| || || || || |||||||||||||| || | || ||
Sbjct 8749482 ACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCCAAGGTACGGCCATCTTCT 8749541
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
||||||||||| || | || || | ||||| ||| || | | ||||||||||
Sbjct 8749542 AGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGG 8749601
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| || ||| | | | ||||| || | ||| ||||| || ||||| |||
Sbjct 8749602 ATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTA 8749661
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|| ||||| ||||||||||||| ||||||
Sbjct 8749662 CCAGTGAGTGTTTTCACAAAAACTTGCATC 8749691
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | ||| | || || || || ||| ||||| || || |||||||||||
Sbjct 22759024 ACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCAGC 22759083
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | ||||| ||||| || ||| || |||| | | |||||||||| ||
Sbjct 22759084 CAACGTACGGCCATCCTCTAGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGGAGG 22759143
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676
| | |||||||||| || || ||| | | | || ||||| || | |||
Sbjct 22759144 AATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCG--ATGGTGTCAGAGCTTTCC 22759201
Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||||| || || || || ||||||||||| || || || |||||||||
Sbjct 22759202 ACCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 22759252
>seq4
Length=23328337
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| || ||||||||||| || || || |||| || |||||||| ||| || ||
Sbjct 22908920 TCCTTCTGGATGTTGTAATCGGCTAAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAA 22908861
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| || |||||||||||| || | || ||||||||| || || ||||| |
Sbjct 22908860 ATCAATCGCTGCTGATCCGGTGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTG 22908801
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | ||||| ||||| || || || || || || || ||||||||
Sbjct 22908800 TCGATGGTGTCAGAGGACTCGACCTCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACG 22908741
Query 48716 AAAATCTGCATCGTGTCTTG 48735
|| ||||||||| | | |||
Sbjct 22908740 AAGATCTGCATCTTTTTTTG 22908721
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || |||| | ||||| | ||||| || ||||| |||||||||||||||||
Sbjct 15771112 ACCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGC 15771171
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | ||||| ||||| ||||| || | || | | ||| || || ||
Sbjct 15771172 TAAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||||||| ||| || ||||| | | || || || | ||||
Sbjct 15771232 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 15771291
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | |||||||| || ||||| || || |||||||| ||||||||
Sbjct 15771292 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 15771339
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| ||||| || || ||| || || |||||||| ||||| | || |||||||
Sbjct 15771358 CACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTC 15771417
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||||||| | | || | | ||| || ||| || | | ||||||||||
Sbjct 15771418 AAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTG 15771477
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|| || |||| | | ||||| || | | ||| ||||| || || |||||
Sbjct 15771478 GATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTT 15771537
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| ||||| || |||||||| ||||||||
Sbjct 15771538 ACCAGTGAGGGTCTTCACAAAGATCTGCAT 15771567
>seq2
Length=19320864
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| ||||| || || ||| ||||| |||||||||||||| || || | |||||
Sbjct 9126491 CACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCTAAAGTACGACCATCCTC 9126550
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|||||||||||| | | || | | ||| |||||| || | || |||||||||
Sbjct 9126551 AAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGGGATACCTTCCTTGTCTTG 9126610
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
||| || ||||| | | || || || | ||| ||| | || ||||| ||
Sbjct 9126611 AATCTTTGCCTTGACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTT 9126670
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || |||||||||||||||||
Sbjct 9126671 TCCAGTGAGGGTCTTCACAAAAATCTGCAT 9126700
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| ||||||||||| ||| || || || ||||||||||| | | || |||||||
Sbjct 9126719 CACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTC 9126778
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||||| | | || | | |||||||||| || | | |||||| |||
Sbjct 9126779 AAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 9126838
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
||| || || | | | || ||||| | | || ||| | || ||||||||
Sbjct 9126839 AATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTT 9126898
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || | || |||||||||||||||||
Sbjct 9126899 GCCAGTCAACGTCTTCACAAAAATCTGCAT 9126928
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| ||||||||||| ||| || || || ||||||||||| | | || |||||||
Sbjct 9215500 CACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTC 9215559
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||||| | | || | | |||||||||| || | | |||||| |||
Sbjct 9215560 AAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTG 9215619
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
||| || || | | | || ||||| | | || ||| | || ||||||||
Sbjct 9215620 AATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTT 9215679
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || | || |||||||||||||||||
Sbjct 9215680 GCCAGTCAACGTCTTCACAAAAATCTGCAT 9215709
>seq1
Length=33132539
Score = 86.0 bits (94), Expect = 5e-12
Identities = 173/253 (68%), Gaps = 9/253 (4%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| | || | | ||| |||||||| || ||| || |||||||||||||||||
Sbjct 10397125 ACCTCCTCTCAGACGAAGCACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGC 10397066
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
| | || | || |||| || || ||| || | ||||| || ||||||||| ||
Sbjct 10397065 GAGTGTTCTTCCATCTTCCAATTGTTTTCCGGCGAAGATTAACCGTTGCTGATCCGGTGG 10397006
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTT---GATAGACGCTATGGTATCGGTAGACTC 48675
| | ||| ||||| ||| ||| |||| || | || || || || | || ||
Sbjct 10397005 GATTCCTTCTTTGTCTTGAATCTTC-GCTTTCACATTGTCG--ATTGTGTCTGATGATTC 10396949
Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCA---TCGTGTC 48732
||| | ||||| || || || || || |||||||| || ||||||| || |||
Sbjct 10396948 AACCTCTAGGGTTATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTCTTGTT 10396889
Query 48733 TTGATCGAAGAAA 48745
| | |||||||||
Sbjct 10396888 TCGCTCGAAGAAA 10396876
>seq7
Length=24649197
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
||||| || |||||| |||||||||||||| || || || || ||||||| |||||
Sbjct 18994152 TGAAGGGTCGACTCCTTCTGAATGTTGTAATCTGC-AAGGGTGCGACCGTCCTCAAGCTG 18994210
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||||||| | | || | | |||||| ||| || | | |||||| || ||| ||
Sbjct 18994211 CTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTT 18994270
Query 48643 CTGCTTGATAGACGCT--ATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
|||| | ||| | || || || | ||| ||| | ||||||||||| ||
Sbjct 18994271 A-GCTTTA-AGATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCA 18994328
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
||||| ||||||||||| ||||||||
Sbjct 18994329 GTGAGGGTTTTCACAAAGATCTGCAT 18994354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421247626736696
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