Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6 105 5e-18 seq4 98.7 8e-16 seq7 95.1 1e-14 seq5 89.7 4e-13 >seq6 Length=25113588 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || |||||||| || ||||||||||| || Sbjct 23404645 CCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCT 23404586 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | ||||| || || | || || ||||| ||||| ||| Sbjct 23404585 AAGGTGCGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGA 23404526 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || |||||| | | | | ||||| | |||| Sbjct 23404525 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTGTCAATGGTGTCTGAGCTCTCCA 23404468 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||| || ||||||| || |||||||| |||||||| Sbjct 23404467 CTTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCAT 23404419 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || |||||||| || |||||||| || ||| Sbjct 22901119 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 22901060 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | |||||||| ||||| || || | || | || ||| |||||| ||| Sbjct 22901059 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 22901000 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || || || || |||||| | | | | |||||| |||| Sbjct 22900999 ATACCTTCCTTATCCTGGATCTTGGC--CTTCACGTTGTCAATAGTGTCTGAACTCTCCA 22900942 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| |||||||| || || || |||||||||||||| Sbjct 22900941 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || |||||||| || |||||||| || ||| Sbjct 23404189 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCAGCC 23404130 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || || | ||| || || || | || | || ||| |||||| ||| Sbjct 23404129 AAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 23404070 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| ||||| | | | | ||||| | |||| Sbjct 23404069 ATACCCTCTTTGTCTTGGATCTTGGCT--TTCACGTTGTCGATGGTGTCAGAGCTCTCCA 23404012 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || ||||| |||| || ||||||||||||||||| Sbjct 23404011 CCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCAT 23403963 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | | ||||| | || Sbjct 905672 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGC 905731 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 || || ||| | ||||||| ||| |||||| ||| | || |||||||| || ||| Sbjct 905732 TTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTCCTGAATCTTT 905791 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | |||||| | ||| ||||| || ||||| || || | Sbjct 905792 GCT--TTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAG 905849 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||||||| |||||||| Sbjct 905850 TCAGAGTCTTGACAAAGATCTGCAT 905874 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || |||||||| || ||||||||||| ||| Sbjct 22758569 CCTCCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22758628 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || || | |||||| || ||| | || | | ||| |||||| ||| Sbjct 22758629 AAAGTTCTGCCATCTTCAAGTTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGG 22758688 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | | ||||| | |||| Sbjct 22758689 ATACCCTCTTTGTCCTGGATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCCA 22758746 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || ||||| |||| ||| ||||| || || ||||| Sbjct 22758747 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22758795 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || ||||||||||| || Sbjct 22900663 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 22900604 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | |||||||| || || || || | || | || ||| || ||| ||| Sbjct 22900603 AGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 22900544 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || |||||| | | | | ||||| |||| Sbjct 22900543 ATACCCTCCTTATCTTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAACTCTCCA 22900486 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || |||||||| || || || ||||| ||||||||||| Sbjct 22900485 CTTCAAGAGTAATAGTTTTTCCCGTTAGGGTCTTGACGAAAATCTGCAT 22900437 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | | |||| ||| || || |||||||| || ||||||||||| ||| Sbjct 22900891 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22900832 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | ||| || || || | || | || ||| |||||| ||| Sbjct 22900831 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 22900772 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| || || | | | | ||||| | |||| Sbjct 22900771 ATACCCTCTTTGTCCTGGATCTTGGCT--TTGACATTGTCGATGGTGTCAGAGCTCTCCA 22900714 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || ||||| |||| ||| ||||| || || ||||| Sbjct 22900713 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22900665 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || ||||||||||| || Sbjct 23403961 CCACCACGAAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 23403902 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | |||||||| || || || || | || | || ||| || ||| ||| Sbjct 23403901 AGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 23403842 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || ||| || | | | | ||||| | ||| Sbjct 23403841 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 23403784 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || |||||||| || || || || || |||||||| Sbjct 23403783 CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCAT 23403735 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || |||| || || || |||||||| || ||||||||||| ||| Sbjct 23404417 CCACCACGTAGACGCAAGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCC 23404358 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||||| || ||||| || | || | || ||| |||||| ||| Sbjct 23404357 AAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 23404298 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || || || || || || |||||| | | | | || || | ||| Sbjct 23404297 ATGCCTTCCTTATCCTGGATCTTGGC--CTTCACGTTGTCAATGGTATCAGAGCTCTCTA 23404240 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| |||||||| || || || || || |||||||| Sbjct 23404239 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACGAAGATCTGCAT 23404191 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || ||||||||||| || Sbjct 22758797 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCA 22758856 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| || | |||||||| || || || || | || | || ||| || ||| ||| Sbjct 22758857 AGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGAGGA 22758916 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| || || ||| | |||||| | | | | |||||| |||| Sbjct 22758917 ATACCCTCCTTATCTTGAATCTTGGCCTTCACGTTGTCGATAGTGTCAGAACTCTCCACC 22758976 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | || || || || || || || || ||||| ||||||||||| Sbjct 22758977 TCAAGAGTAATCGTCTTCCCCGTTAGGGTCTTGACGAAAATCTGCAT 22759023 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||| |||| || | ||| Sbjct 22758356 AGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCC 22758415 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | || || ||||| |||||| ||| | || || ||||| Sbjct 22758416 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCC 22758475 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| |||| |||||||| Sbjct 22758476 TGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATGG 22758533 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||||||| || ||||| || ||||||||||| Sbjct 22758534 TCTTTCCGGTGAGAGTTTTCACGAAAATCTGCAT 22758567 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || |||||||| || ||||||||||| ||| Sbjct 22901347 CCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 22901288 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| | ||||| || || | || || ||||| |||||| ||| Sbjct 22901287 AAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 22901228 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || |||||| | | | | ||||| | ||| Sbjct 22901227 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGAGCTCTCGA 22901170 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||| || || || |||| || ||||| || |||||||| Sbjct 22901169 CTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 22901121 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || ||||||||||| || |||||||| |||| ||| | ||| Sbjct 22901560 AGCACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCC 22901501 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || || | || || ||||| |||||| ||| | || || ||||| Sbjct 22901500 TCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCC 22901441 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| || | ||| |||| Sbjct 22901440 TGGATCTTGGC--CTTCACGTTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGG 22901383 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || |||||||| || || || ||||||||||| Sbjct 22901382 TCTTCCCGGTCAGAGTCTTCACGAAAATCTGCAT 22901349 >seq4 Length=23328337 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| | | ||||| | || Sbjct 15771593 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGC 15771652 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 || || ||| | ||||||| ||| |||||| ||| | || |||||||| || ||| Sbjct 15771653 TTACCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTCCTGAATCTTT 15771712 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | |||||| | ||| ||||| || ||||| || || | Sbjct 15771713 GCT--TTGACGTTGTCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAG 15771770 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||||||| |||||||| Sbjct 15771771 TCAGAGTCTTGACAAAGATCTGCAT 15771795 >seq7 Length=24649197 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| |||||||| || || | ||| | ||||| | ||| Sbjct 18993696 TGGAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCATCCTCAAGTTGC 18993755 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAA--TTT 16850 ||||| || | ||||| | |||||||||| ||| | || |||||||| || || Sbjct 18993756 TTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGAATCTTA 18993815 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| ||||| | | | | ||||| | ||| ||| | || |||||||| |||| Sbjct 18993816 GCT--TTCACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTACCGG 18993873 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| ||||| |||||||| Sbjct 18993874 TAAGAGTTTTCACAAATATCTGCAT 18993898 >seq5 Length=21221946 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| ||||| |||||||| || |||||||||||||| | ||| | |||| Sbjct 20743184 AGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCT 20743125 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| ||||| || || |||| | ||||| |||||| || | || || ||||| Sbjct 20743124 TCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCT 20743065 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | | |||||| | || || | ||| |||| Sbjct 20743064 TGGATCTTCGCT--TTCACATTGTCGATGGTGTCGGACGATTCAACCTCTAGGGTTATGG 20743007 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || ||||| || || |||||||| || Sbjct 20743006 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 20742970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084563841040