Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 118 1e-21 seq7 113 4e-20 seq4 107 2e-18 seq2 105 7e-18 seq5 96.9 3e-15 seq1 91.5 1e-13 >seq6 Length=25113588 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | ||| | || || || | | | |||||||| || |||||||||||| Sbjct 23404875 AGCCACCACGGAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 23404816 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 || |||||| ||||| || || || || | |||| |||||||| |||||||||| Sbjct 23404815 CCAAAGTACGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAG 23404756 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | |||||||| || || ||| || || | | || | |||||| | ||||| Sbjct 23404755 GGATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCA 23404696 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | ||| | || || || |||||||| || || |||||||||||| Sbjct 23404695 CCTCCAGCGTGATAGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCATG 23404646 Score = 111 bits (122), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | ||| || || | | |||| || || || || ||||| ||| || Sbjct 905876 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGTC 905935 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || |||||||||| |||||| | ||| ||||||||||| Sbjct 905936 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 905995 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | |||| ||| |||| || | |||||| | ||| | Sbjct 905996 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTG-TCGATGGTGTCAGAGCTCTCAA 906053 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || ||||| ||||| || ||||| Sbjct 906054 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 906102 Score = 111 bits (122), Expect = 2e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | | |||||||| |||||||||||||| | Sbjct 22758569 CCTCCACGGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22758628 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || |||||||| |||| | |||| | | ||| ||||||||||| Sbjct 22758629 AAAGTTCTGCCA-TCTTCAAGTTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGG 22758687 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| |||||||| ||| || ||| | |||| || | |||||| | ||||| Sbjct 22758688 GATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTG-TCGATGGTGTCAGAGCTCTCCA 22758746 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||||| || || || || || ||||| Sbjct 22758747 CCTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22758795 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | |||||||| ||||||||||| || | Sbjct 23404189 CCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCAGCC 23404130 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || ||||| || |||| |||| | | ||| ||||||||||| Sbjct 23404129 AAAGTTCTGCCA-TCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 23404071 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| || ||| | | || | |||||| | |||||| Sbjct 23404070 GATACCCTCTTTGTCTTGGATCTTGGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCCAC 23404011 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||||| ||| || |||||||||||||| Sbjct 23404010 CTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCAT 23403963 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | || ||||| | | ||||| || || ||||||||||| Sbjct 905420 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCA 905479 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||| || || ||||||| | |||| || | ||||||||||||||| Sbjct 905480 AGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGA 905539 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | |||||| | ||| ||| Sbjct 905540 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACC 905599 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||||||||| || || || ||||| |||||||| Sbjct 905600 TCGAGGGTAATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 905646 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| || || ||||| | | | |||||||| |||||||||||||| | Sbjct 22900891 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22900832 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | ||| || ||||| || |||| |||| | | ||| ||||||||||| Sbjct 22900831 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 22900772 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| || ||| | |||| || | |||||| | |||||| Sbjct 22900771 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTG-TCGATGGTGTCAGAGCTCTCCAC 22900713 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||||| || || || || || ||||| Sbjct 22900712 CTCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22900665 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | || ||||| | | ||||||| ||||| ||||||||||| | Sbjct 8749008 CCACCTCTAAGACGAAGCACCAAATGGAGGGTTGACTCTTTTTGGATGTTGTAGTCAGCC 8749067 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || ||||| | | |||| || | ||| |||||||| || Sbjct 8749068 AGTGTGCGACCATCCTCTAGCTGCTTACCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGG 8749127 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || ||||| || ||| | || | ||| |||| || | |||||| | ||| | Sbjct 8749128 ATTCCCTCTTTATC-CTGAATCTTAGCTTTGACATTG-TCAATGGTGTCTGAGCTCTCAA 8749185 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||||||||| ||||| || ||||| || ||||| Sbjct 8749186 CCTCTAGGGTGATTGTTTTACCAGTGAGAGTCTTCACAAAGATTTGCAT 8749234 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||||||| ||||| || ||||| || | Sbjct 22901314 GACTCCTTCTGGATGTTGTAGTCCGCCAAAGTACGCCCATCCTCAAGCTGTTTTCCAGCG 22901255 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 22901254 AAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 22901195 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| || || | || | ||| || ||||||| ||| || Sbjct 22901194 TTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTG 22901135 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 22901134 ACGAAGATCTGCAT 22901121 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| || |||||||| || || || ||||| || ||||| || | Sbjct 22901542 GACTCCTTTTGGATATTGTAGTCAGCCAAGGTGCGACCATCCTCAAGCTGTTTTCCAGCG 22901483 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| |||||||| ||||| ||| || || | Sbjct 22901482 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACG 22901423 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||||| || | || || || |||||||| || Sbjct 22901422 TTGTCAATGGTGTCAGAGCTCTCTACCTCGAGGGTAATGGTCTTCCCGGTCAGAGTCTTC 22901363 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 22901362 ACGAAAATCTGCAT 22901349 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| | ||||| || || ||||||| | Sbjct 905681 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCA 905740 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| ||||||||||| || ||||||||||| ||| | |||| ||| | Sbjct 905741 AAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTC-CTGAATCTTTGCTTTGAC 905799 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | ||| || || | || | || || ||||||||||| | Sbjct 905800 GTTG-TCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCT 905858 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 905859 TGACAAAGATCTGCAT 905874 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || ||| || ||||| || || || || | Sbjct 22758374 GACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCCTCAAGCTGCTTTCCAGCG 22758433 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| |||||||| ||||| ||| || || | Sbjct 22758434 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACG 22758493 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||| ||||| | || | || || || || |||||||| Sbjct 22758494 TTGTCAATGGTGTCAGAGCTCTCTACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTC 22758553 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 22758554 ACGAAAATCTGCAT 22758567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| ||| | || || ||||| || ||||| || | Sbjct 23404612 GACTCCTTCTGGATGTTGTAGTCAGCT-AAGGTGCGGCCATCCTCAAGCTGTTTTCCAGC 23404554 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 |||| |||||||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 23404553 GAAGATGAGACGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC 23404494 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||| | |||||| || | || | || ||||| |||| ||| | Sbjct 23404493 ATTG-TCAATGGTGTCTGAGCTCTCCACTTCAAGGGTGATGGTCTTACCGGTCAAAGTCT 23404435 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 23404434 TGACAAAGATCTGCAT 23404419 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | | |||||||| || |||||||| || | Sbjct 22901119 CCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCC 22901060 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| | ||||| |||| |||| | | ||| ||||||||||| Sbjct 22901059 AAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 22901000 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| || || | | || | ||||| | ||||||| Sbjct 22900999 ATACCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACC 22900940 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| || |||||||||||||| Sbjct 22900939 TCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || || |||| |||||| || | || | | | || ||||| ||||||||||| || ||| Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || ||||| || |||||||| | |||| || | ||||||||| || || Sbjct 905252 -AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || | | || | ||||| | ||||| Sbjct 905311 GATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCA 905369 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || || || || ||||| |||||||| Sbjct 905370 CCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 905418 >seq7 Length=24649197 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| ||| | | ||| || || | | |||||||||| ||||| ||||| || Sbjct 18994583 GCCACCTCTCAACCTAAGAACCAAGTGGAGGGTTGACTCCTTCTGAATATTGTAATCAGC 18994642 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| |||||| ||||||||||||| | |||| || | ||| |||||||| | Sbjct 18994643 CAAAGTACGACCGTCCTCAAGTTGTTTACCGGCAAAGATAAGTCTCTGCTGGTCCGGCAG 18994702 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| ||| || | |||| || | ||||||| || | Sbjct 18994703 GATTCCTTCCTTGTCTTGGATCTTTGCCTTGACATTG-TCAATTGTGTCGGAGCTTTCGA 18994761 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| ||||| || || || |||||||| Sbjct 18994762 CCTCAAGAGTTATGGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 18994810 Score = 109 bits (120), Expect = 5e-19 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || | || | ||||||||||||| |||||||| || | | Sbjct 18993672 CCACCACGAAGACGCAACACAAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAATC-CGC 18993730 Query 138448 ATAGTACGCGAG--TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | || |||| ||||| ||||| || || | |||| || | |||||||||||||| Sbjct 18993731 A-AGGGTGCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAG 18993789 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTC 138563 | || ||||||||||| ||| | || | ||| | ||| || | |||||| | ||| Sbjct 18993790 GGATTCCTTCTTTGTC-TTGAATCTTAGCTTTCACGTTG-TCAATGGTGTCTGAGCTCTC 18993847 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || | |||||||| || |||||||| ||||| |||||||| Sbjct 18993848 AACTTCTAGAGTAATGGTTTTACCGGTAAGAGTTTTCACAAATATCTGCAT 18993898 Score = 102 bits (112), Expect = 8e-17 Identities = 143/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| || | || || |||||| || || ||||||| | Sbjct 18994161 GACTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGACCGTCCTCAAGCTGCTTACCGGCA 18994220 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-- 138538 |||| || | ||| ||||||||||| || ||||| || || ||| | || | |||| Sbjct 18994221 AAGATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATC-TTGAATCTTAGCTTTAAG 18994279 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||||| | ||| ||||| | || | ||||| ||||| || |||| Sbjct 18994280 ATTG-TCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCAGTGAGGGTTT 18994338 Query 138599 TTACAAAAATCTGCATG 138615 | ||||| ||||||||| Sbjct 18994339 TCACAAAGATCTGCATG 18994355 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 ||||| || ||||| ||||| || ||| | |||||| |||||||| ||||| |||| Sbjct 18993477 GACTCTTTCTGAATATTGTAATCCGCTAA-AGTACGACCATCCTCGAGCTGTTTTCCGGC 18993535 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTA 138538 | ||||||| | ||| ||||||||| ||| ||||||||||| ||| | || | |||| Sbjct 18993536 AAAGATTAGCCTCTGCTGGTCCGGAACTATCCCTTCTTTGTC-CTGAATCTTGGCCTTTA 18993594 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | || || | ||| ||||| | || | || || || |||| ||| | Sbjct 18993595 CGTTGTCAATCGTATCAGAGCTCTCGACCTCAAGTGTGATGGTCTTGCCCGTCAAAGTCT 18993654 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||||||||| Sbjct 18993655 TGACAAAAATCTGCAT 18993670 Score = 96.9 bits (106), Expect = 3e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||||||||| ||||| || || |||||| ||||||||||||||||||| Sbjct 18994843 TTGACTCCTTTTGAATATTGTAATCAGCCAAAGTACGGCCATCCTCGAGTTGTTTACCGG 18994902 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 | |||| || || || ||||| |||| || ||||||||||| Sbjct 18994903 CAAAGATAAGCCGTTGCTGGTCTAGAGGAATCCCTTCTTTGTC 18994945 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || | ||| | | |||||||||| || |||||||| || Sbjct 18994355 GCCACCGCGAAGACGAAGTACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGC 18994414 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| |||||||| || ||||||| |||| || | ||||||||||| ||| Sbjct 18994415 AAGAGTACGGCCATCCTCGAGCTGCTTACCGGCGAAGATAAGTCTCTGTTGGTCCGTAGG 18994474 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | ||| || | || || Sbjct 18994475 GATTCCTTCCTTGTCTTCGATCTTGGCCTTGACGTTATCGATGGTATCTGAGCTTTCGAC 18994534 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | ||| || || || ||||| || ||||| || |||||| Sbjct 18994535 CTCAAGGGTTATCGTCTTCCCTGTAAGAGTCTTAACAAAGATTTGCATG 18994583 >seq4 Length=23328337 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | || ||||| | | ||||| || || ||||||||||| Sbjct 15771341 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCA 15771400 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||| || || ||||||| | |||| || | ||||||||||||||| Sbjct 15771401 AGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGA 15771460 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | |||||| | ||| ||| Sbjct 15771461 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACC 15771520 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||||||||| || || || ||||| |||||||| Sbjct 15771521 TCGAGGGTAATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 15771567 Score = 105 bits (116), Expect = 7e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | ||| || || | | |||| || || || || ||||| ||| | Sbjct 15771797 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 15771856 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || |||||||||| |||||| | ||| ||||||||||| Sbjct 15771857 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 15771916 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | |||| ||| |||| || | |||||| | ||| | Sbjct 15771917 ATGCCTTCCTTGTC-CTGAATCTTTGCCTTAACATTG-TCGATGGTGTCAGAGCTCTCAA 15771974 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || ||||| ||||| || ||||| Sbjct 15771975 CCTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 15772023 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| | ||||| || || ||||||| | Sbjct 15771602 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCCTCAAGCTGCTTACCGGCA 15771661 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| ||||||||||| || ||||||||||| ||| | |||| ||| | Sbjct 15771662 AAGATAAGCCTCTGCTGGTCCGGAGGGATTCCTTCTTTGTC-CTGAATCTTTGCTTTGAC 15771720 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | ||| || || | || | || || ||||||||||| | Sbjct 15771721 GTTG-TCAATAGTGTCAGAGCTCTCAACTTCCAAAGTAATGGTCTTGCCAGTCAGAGTCT 15771779 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 15771780 TGACAAAGATCTGCAT 15771795 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || || |||| |||||| || | || | | | || ||||| ||||||||||| || ||| Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || ||||| || |||||||| | |||| || | ||||||||| || || Sbjct 15771173 -AAAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || | | || | ||||| | ||||| Sbjct 15771232 GATCCCTTCCTTGTC-CTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCA 15771290 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || || || || || ||||| |||||||| Sbjct 15771291 CCTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 15771339 >seq2 Length=19320864 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || |||| | ||| | || ||||| | | | ||||| ||||| |||||||| || ||| Sbjct 9126474 CCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCT 9126533 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||||| || || ||||||| | |||| || | |||||| |||||||| Sbjct 9126534 AA-AGTACGACCATCCTCAAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGG 9126592 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| | |||| || | | || | ||||| | ||| | Sbjct 9126593 GATACCTTCCTTGTCT-TGAATCTTTGCCTTGACATTATCAATAGTGTCTGAGCTCTCAA 9126651 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| || || || |||||||||||||| Sbjct 9126652 CCTCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 9126700 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || | || | | | || ||||| || ||||||||||| | Sbjct 9215255 CCACCACGAAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCC 9215314 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||| |||||||| | |||| || | ||||||||| || || Sbjct 9215315 AAAGTCCGACCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 9215374 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || ||| | | || | ||||| | ||| ||| Sbjct 9215375 ATCCCTTCCTTGTCCTGGATCTTAGCTTTAACATTATCGATAGTGTCTGAGCTCTCAACC 9215434 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || || || |||||||||||||| Sbjct 9215435 TCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 9215481 >seq5 Length=21221946 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||||| ||| || || ||||| |||| Sbjct 20743166 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCG 20743107 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||||| |||||||| || || ||||| ||||| ||| || ||| | | Sbjct 20743106 AAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTCGCTTTCACA 20743047 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| ||| || ||||| | || | || || || || || ||||| Sbjct 20743046 TTG-TCGATGGTGTCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 20742988 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 20742987 CACGAAGATCTGCAT 20742973 >seq1 Length=33132539 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCG 138477 ||||||| || || |||||||| || ||| | ||| || || || ||||| || ||| Sbjct 29081725 TTGACTCTTTCTGGATGTTGTAATCCGCTAA-AGTGCGACCATCTTCAAGTTGCTTCCCG 29081667 Query 138478 GAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT 138537 | | ||||||| | ||| |||||||| || || ||||||||||| ||| ||| || Sbjct 29081666 GCAAAGATTAGCCTCTGCTGGTCCGGTGGGATCCCTTCTTTGTCCTGGATCTTTGCCTTC 29081607 Query 138538 A-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | |||| || | ||| || | ||||| || | ||| | || || || |||| ||| Sbjct 29081606 ACATTG-TCAATGGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCGTCAAAGT 29081548 Query 138597 TTTTACAAAAATCTGCAT 138614 || ||||| |||||||| Sbjct 29081547 CTTGACAAATATCTGCAT 29081530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258082517120