Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq6 100 2e-16 seq5 100 2e-16 seq4 100 2e-16 seq2 100 2e-16 seq1 98.7 7e-16 seq7 95.1 9e-15 >seq6 Length=25113588 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || ||||| ||||| || |||||||| || ||| |||| |||| || Sbjct 905438 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTCA 905497 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || || || | || | | ||||||||| ||||||||||||||||| Sbjct 905498 AGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTGG 905557 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||| ||| | || || || || | | || || || | |||||| |||||| Sbjct 905558 ATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTTA 905617 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||| || |||||| Sbjct 905618 CCAGTGAGGGTCTTCACAAAGATCTGCATA 905647 Score = 95.1 bits (104), Expect = 9e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| || || || || || ||||||||||| ||| | | | || || Sbjct 8748341 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTC 8748400 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||||| |||||| | || | | ||||||||| || || ||||||||||| Sbjct 8748401 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTG 8748460 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| || || ||| | || || || || | || || || |||||||| || || Sbjct 8748461 AATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTT 8748520 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 |||||||| ||| |||||||| |||||||| Sbjct 8748521 ACCTGTCAAAGTCTTTACAAAGATTTGCAT 8748550 Score = 95.1 bits (104), Expect = 9e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006 ||||||| || | |||| || || |||||||| || || || || |||||||| || | Sbjct 23404647 TGCCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 23404588 Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 || || | | | || || | ||||| |||||| | || | |||||| ||||| Sbjct 23404587 CTAAGG-TGCGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGA 23404529 Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 ||||| ||||||||||| || ||| || ||| | || || || || | || Sbjct 23404528 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCC 23404469 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || | ||| ||||| ||||| |||| ||| || ||||| || |||||| Sbjct 23404468 ACTTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCATA 23404418 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | ||| || || || || || ||||| || |||||||||||| Sbjct 10622088 CCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCC 10622029 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | | ||||||| ||||| || ||| | || || | || ||||| ||| Sbjct 10622028 AAAGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCTAGAGGA 10621969 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || || || || | || || Sbjct 10621968 ATCCCTTCCTTGTCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAAC 10621910 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | |||||||| || || || || ||||| |||||||||||||| Sbjct 10621909 CTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACAAAAATTTGCAT 10621862 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || |||| | ||| || |||||||||||||| || || || |||||||| || Sbjct 22900891 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22900832 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| ||||||| | ||| || || ||| | ||||| | ||| ||||| ||| Sbjct 22900831 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 22900772 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| || ||| ||| ||| | || || || || | || || Sbjct 22900771 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACC 22900712 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || || |||| || || || || ||||||||| Sbjct 22900711 TCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 22900664 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | ||| || || ||||| || ||||| || || ||||||||| | Sbjct 905876 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGTC 905935 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | ||||||| ||||| || ||| | || || | ||| ||||| ||| Sbjct 905936 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 905995 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || || || || | || || Sbjct 905996 ATGCCTTCCTTGTCCTGAATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 906054 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188 || | || ||||| || || || || ||||| ||||| |||||| || |||||| || Sbjct 906055 CTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGC--ATCTGAAATTAA 906112 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | || || | |||||||| || || || || || |||||||| Sbjct 10622774 TGCCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCCG 10622715 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | || || | ||||| |||||| | || | | ||| || || || Sbjct 10622714 CAAGAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGATCTGGTG 10622655 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || ||||| ||||| ||||||| || ||| | || || || || | | || | Sbjct 10622654 GGATCCCTTCTTTGTCCTGAATTTTGGCCTTGACATTATCGATTGTGTCTGAACTCTCAA 10622595 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || || ||||||||||| || || || || || ||||| ||||||||| Sbjct 10622594 CCTCCAAAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCATA 10622545 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAAT-CGCTGAGAATTCTCGCGTC 15023 || || || |||||||| || || || || |||||||||| ||| || | | | || Sbjct 22901104 AACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAAG-GTACGACCATC 22901046 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 || || ||||| || ||| | ||||| | ||| ||||| || || |||||||| || Sbjct 22901045 CTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTATC 22900986 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 || ||| || || | || ||||| || | | || || || ||||| ||||| Sbjct 22900985 CTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACCTCCAAGGTGATGGT 22900926 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || |||||||| |||||| Sbjct 22900925 CTTTCCGGTGAGAGTCTTCACAAAAATCTGCATA 22900892 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| || | | ||| ||||| || || || ||||| || || |||||||| || Sbjct 8749464 CCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCC 8749523 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | ||||||| || || |||||| | ||||| | || ||||| || Sbjct 8749524 AAGG-TACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGG 8749582 Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||| ||||||||||| || ||||| || ||| | || || || || | || | Sbjct 8749583 AATGCCTTCCTTGTCCTGGATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAA 8749641 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | || ||||| ||||| || || ||||| ||||||| |||||| Sbjct 8749642 CCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 8749690 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||| |||| | || || | ||||||||||| || || || ||||||||||| ||| Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 | | | | | || || | ||||| |||||| | || | | ||||||||| ||| Sbjct 905252 AA-AGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| || || ||| | || || || || | || || Sbjct 905311 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 905370 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || || || || ||||| || |||||| Sbjct 905371 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 905419 >seq5 Length=21221946 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || || || || |||||||| ||| ||| | | ||||||| | || Sbjct 20743176 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTG 20743117 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| || ||| | ||||| ||||| ||||| ||| |||||||||||||| || || Sbjct 20743116 TTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTT 20743057 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||| ||| | || || || ||| ||| || |||| ||| ||||| || || || Sbjct 20743056 CGCTTTCACATTGTCGATGGTGTCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGT 20742997 Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180 || ||||| || || || ||||| ||| Sbjct 20742996 TAGGGTTTTCACGAAGATCTGCATCTTT 20742969 >seq4 Length=23328337 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || ||||| ||||| || |||||||| || ||| |||| |||| || Sbjct 15771359 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTCA 15771418 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || || || | || | | ||||||||| ||||||||||||||||| Sbjct 15771419 AGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTGG 15771478 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||| ||| | || || || || | | || || || | |||||| |||||| Sbjct 15771479 ATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTTA 15771538 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||| || |||||| Sbjct 15771539 CCAGTGAGGGTCTTCACAAAGATCTGCATA 15771568 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | ||| || || ||||| || ||||| || || ||||||||| Sbjct 15771797 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 15771856 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | ||||||| ||||| || ||| | || || | ||| ||||| ||| Sbjct 15771857 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 15771916 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| ||||| || ||| | || || || || | || || Sbjct 15771917 ATGCCTTCCTTGTCCTGAATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 15771975 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || || || ||||| ||||| |||||||| Sbjct 15771976 CTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 15772023 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||| |||| | || || | ||||||||||| || || || ||||||||||| ||| Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 | | | | | || || | ||||| |||||| | || | | ||||||||| ||| Sbjct 15771173 AA-AGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || ||||||||||| ||| || || ||| | || || || || | || || Sbjct 15771232 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 15771291 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || || || || ||||| || |||||| Sbjct 15771292 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 15771340 >seq2 Length=19320864 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||| ||||| ||||| || || |||||||| ||| | | |||| || Sbjct 9126720 ACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTCA 9126779 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || ||||| | || | | ||| || || || ||||||||||| || | Sbjct 9126780 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGA 9126839 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || |||||||| | |||| || || || ||||||||||| Sbjct 9126840 ATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTTG 9126899 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| || || |||||||| |||||| Sbjct 9126900 CCAGTCAACGTCTTCACAAAAATCTGCATA 9126929 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||| ||||| ||||| || || |||||||| ||| | | |||| || Sbjct 9215501 ACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTCA 9215560 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || ||||| | || | | ||| || || || ||||||||||| || | Sbjct 9215561 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGA 9215620 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || |||||||| | |||| || || || ||||||||||| Sbjct 9215621 ATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTTG 9215680 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| || || |||||||| |||||| Sbjct 9215681 CCAGTCAACGTCTTCACAAAAATCTGCATA 9215710 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || ||||||||||| | | | | | || || | ||| Sbjct 9126042 TGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCAAGCTGT 9126101 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | || | | ||||||||| ||| || || |||||||| || || Sbjct 9126102 TTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTA 9126161 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || ||||||||| | |||| || || || || |||||||| || || Sbjct 9126162 GCCTTAACATTATCGATAGTATCGGAACTTTCAACCTCCAAAGTTATGGTTTTCCCGGTA 9126221 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || |||||||| || |||||| Sbjct 9126222 AGGGTCTTTACAAAGATCTGCATA 9126245 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| || || | ||| ||||| || || || || || || || |||||||| || Sbjct 9126930 CCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCTGCC 9126989 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | |||||||| ||||| |||||| | ||||| | ||| ||||| || Sbjct 9126990 AAGG-TACGACCATCTTCTAACTGTTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGG 9127048 Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||| |||||||| || ||| ||||| || ||| | || || || || | || | Sbjct 9127049 AATACCTTCCTTATCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAA 9127107 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | |||||||| || || || || ||||| || ||||||||||| Sbjct 9127108 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 9127156 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||||| || || | ||| ||||| || || || || || || || |||||||| || Sbjct 9215711 CCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCTGCC 9215770 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | |||||||| ||||| |||||| | ||||| | ||| ||||| || Sbjct 9215771 AAGG-TACGACCATCTTCTAACTGTTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGG 9215829 Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||| |||||||| || ||| ||||| || ||| | || || || || | || | Sbjct 9215830 AATACCTTCCTTATCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAA 9215888 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | |||||||| || || || || ||||| || ||||||||||| Sbjct 9215889 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 9215937 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || ||||||||||| | | | | | || || | ||| Sbjct 9214823 TGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGTCCATCCTCGAGCTGT 9214882 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | || | | ||||||||| ||| || || |||||||| || || Sbjct 9214883 TTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTA 9214942 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| | || ||||||||| | |||| || || || || |||||||| || || Sbjct 9214943 GCTTTAACATTATCGATAGTATCGGAACTTTCAACCTCCAAAGTTATGGTTTTCCCGGTA 9215002 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || |||||| Sbjct 9215003 AGGGTCTTCACAAAGATCTGCATA 9215026 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025 ||| || ||||| || || || || || ||||||||||| ||| | | | | | || | Sbjct 9125807 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT-AAAGTCCGACCATCCT 9125865 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | ||||| |||||| | || | | ||||||||| ||| || || |||||||| Sbjct 9125866 CGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCT 9125925 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 ||| || || || | || || || || | || || || || |||||||| | Sbjct 9125926 GAATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCT 9125985 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | ||||||| |||||| ||||| ||||||||| Sbjct 9125986 TGCCTGTCAAAGTTTTCACAAATATTTGCATA 9126017 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTC 15026 || ||||| |||||||| |||||||| ||||||||||| ||| | | | | | || || Sbjct 9126492 ACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCTAA-AGTACGACCATCCTC 9126550 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || || || | || | | |||||| || || || ||||||||||| Sbjct 9126551 AAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGGGATACCTTCCTTGTCTTG 9126610 Query 15087 AAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 ||| ||||| || ||| | || ||||| || | || || || || |||||||| | Sbjct 9126611 AATCTTTGC-CTTGACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCT 9126669 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || || || || || |||||||| |||||| Sbjct 9126670 TTCCAGTGAGGGTCTTCACAAAAATCTGCATA 9126701 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || |||||||| || | | | | | || || | ||| Sbjct 9215279 TGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCGACCATCCTCGAGCTGT 9215338 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | || | | ||||||||| ||| || ||||||||||| || || Sbjct 9215339 TTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATCTTA 9215398 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| | || ||||| || | || || || || |||||||| || || || Sbjct 9215399 GCTTTAACATTATCGATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTTTCCAGTG 9215458 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| |||||| Sbjct 9215459 AGGGTCTTCACAAAAATCTGCATA 9215482 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| |||||||| || ||||| ||||||||||| || | | | ||||| | || Sbjct 9215050 ATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCAAGCTG 9215109 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || || | || | | ||||||||| ||| || || |||||||| ||| || Sbjct 9215110 CTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTT 9215169 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || | || || || || | || || || || |||||||| || ||||| Sbjct 9215170 AGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTTGCCTGT 9215229 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || |||||| ||||| ||||||||| Sbjct 9215230 CAAAGTTTTCACAAATATTTGCATA 9215254 >seq1 Length=33132539 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || |||||||| || || ||||| || ||||||||||| ||| |||| | ||||| Sbjct 10397106 ACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGCGAGTGTTCTTCCATCTTCC 10397047 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 |||||||| || ||| | || || || || || || ||| |||||||| ||||| | Sbjct 10397046 AATTGTTTTCCGGCGAAGATTAACCGTTGCTGATCCGGTGGGATTCCTTCTTTGTCTTGA 10396987 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| | || || || || ||| || |||| ||| || || || Sbjct 10396986 ATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAACCTCTAGGGTTATTGTCTTC 10396927 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || || ||||| || || || ||||| || Sbjct 10396926 CCCGTTAGGGTTTTCACGAAGATCTGCATTTT 10396895 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | || | ||| || || || |||||||| ||||||||||| Sbjct 29080840 CCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCTGCA 29080781 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| | || || | ||||| |||||| | || | | |||||| || || Sbjct 29080780 AGCGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGGAGGG 29080721 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || || ||| || | || || || || | | || || Sbjct 29080720 ATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTCTCGACT 29080661 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| ||||||||||||||| || || || || | || || |||||| Sbjct 29080660 TCTAGGGTAATGGTTTTACCGGTGAGCGTCTTGATGAATATCTGCATA 29080613 >seq7 Length=24649197 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025 ||| ||||| || || || ||||| || ||||||||||| ||| || ||| | || | Sbjct 18993917 AACCAAATGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCT-AGGGTTCGACCATCCT 18993975 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | | ||| ||||||||| | || | | ||| ||||| || ||| ||||||| || Sbjct 18993976 CAAGTTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGCAGGGATTTCTTCCTTATCTT 18994035 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 ||| || ||| ||| | || || || || | || || |||| |||||||||| Sbjct 18994036 GAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTTC 18994095 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || || ||||| ||||| |||||||| Sbjct 18994096 TGCCAGTAAGGGTTTTCACAAATATTTGCAT 18994126 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || ||||| ||||||||||| || | | | || || | ||| Sbjct 18993696 TGGAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCATCCTCAAGTTGC 18993755 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||||||| | || | | ||||||||| || |||||||| ||||| ||| || Sbjct 18993756 TTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGAATCTTA 18993815 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| || | || || || || | || || |||| |||||||||||||| || Sbjct 18993816 GCTTTCACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTACCGGTA 18993875 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 |||||||| ||||| || ||||| Sbjct 18993876 AGAGTTTTCACAAATATCTGCAT 18993898 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||||||||| || || || || ||||||||||| ||| | | | || || | || Sbjct 18994379 ATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTACGGCCATCCTCGAGCTG 18994438 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || ||| | || | | ||||||||| | || |||||||||||||| || || Sbjct 18994439 CTTACCGGCGAAGATAAGTCTCTGTTGGTCCGTAGGGATTCCTTCCTTGTCTTCGATCTT 18994498 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || | || || ||||| |||| || || | ||| || || || ||||| Sbjct 18994499 GGCCTTGACGTTATCGATGGTATCTGAGCTTTCGACCTCAAGGGTTATCGTCTTCCCTGT 18994558 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| |||||||| Sbjct 18994559 AAGAGTCTTAACAAAGATTTGCAT 18994582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357388968422360