Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq6 100 2e-16
seq5 100 2e-16
seq4 100 2e-16
seq2 100 2e-16
seq1 98.7 7e-16
seq7 95.1 9e-15
>seq6
Length=25113588
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| || ||||| ||||| || |||||||| || ||| |||| |||| ||
Sbjct 905438 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTCA 905497
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || || || | || | | ||||||||| |||||||||||||||||
Sbjct 905498 AGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTGG 905557
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| ||| ||| | || || || || | | || || || | |||||| ||||||
Sbjct 905558 ATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTTA 905617
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || ||||| || ||||||
Sbjct 905618 CCAGTGAGGGTCTTCACAAAGATCTGCATA 905647
Score = 95.1 bits (104), Expect = 9e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| || ||||| || || || || || ||||||||||| ||| | | | || ||
Sbjct 8748341 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTCCGACCATCCTC 8748400
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| ||||| |||||| | || | | ||||||||| || || |||||||||||
Sbjct 8748401 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTG 8748460
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||| || || ||| | || || || || | || || || |||||||| || ||
Sbjct 8748461 AATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTT 8748520
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|||||||| ||| |||||||| ||||||||
Sbjct 8748521 ACCTGTCAAAGTCTTTACAAAGATTTGCAT 8748550
Score = 95.1 bits (104), Expect = 9e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006
||||||| || | |||| || || |||||||| || || || || |||||||| || |
Sbjct 23404647 TGCCACCACGAAGCCTTAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 23404588
Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066
|| || | | | || || | ||||| |||||| | || | |||||| |||||
Sbjct 23404587 CTAAGG-TGCGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGA 23404529
Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126
||||| ||||||||||| || ||| || ||| | || || || || | ||
Sbjct 23404528 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCC 23404469
Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || | ||| ||||| ||||| |||| ||| || ||||| || ||||||
Sbjct 23404468 ACTTCAAGGGTGATGGTCTTACCGGTCAAAGTCTTGACAAAGATCTGCATA 23404418
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | ||| || || || || || ||||| || ||||||||||||
Sbjct 10622088 CCACCTCTTAAACGAAGAACCAAGTGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCC 10622029
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | | ||||||| ||||| || ||| | || || | || ||||| |||
Sbjct 10622028 AAAGTACGGCCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTTTGCTGGTCTAGAGGA 10621969
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| ||||||||||| ||| ||||| || ||| | || || || || | || ||
Sbjct 10621968 ATCCCTTCCTTGTCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAAC 10621910
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | |||||||| || || || || ||||| ||||||||||||||
Sbjct 10621909 CTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACAAAAATTTGCAT 10621862
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|| || |||| | ||| || |||||||||||||| || || || |||||||| ||
Sbjct 22900891 CCTCCACGCAGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCC 22900832
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| ||||||| | ||| || || ||| | ||||| | ||| ||||| |||
Sbjct 22900831 AAAGTTCTGCCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGA 22900772
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || ||||| || ||| ||| ||| | || || || || | || ||
Sbjct 22900771 ATACCCTCTTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACC 22900712
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || || || |||| || || || || |||||||||
Sbjct 22900711 TCCAAAGTGATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCATA 22900664
Score = 89.7 bits (98), Expect = 4e-13
Identities = 166/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | ||| || || ||||| || ||||| || || ||||||||| |
Sbjct 905876 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGTC 905935
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | ||||||| ||||| || ||| | || || | ||| ||||| |||
Sbjct 905936 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 905995
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| ||||||||||| ||| ||||| || ||| | || || || || | || ||
Sbjct 905996 ATGCCTTCCTTGTCCTGAATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 906054
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAA 15188
|| | || ||||| || || || || ||||| ||||| |||||| || |||||| ||
Sbjct 906055 CTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGC--ATCTGAAATTAA 906112
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007
||||||| || | | || || | |||||||| || || || || || ||||||||
Sbjct 10622774 TGCCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCCG 10622715
Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
||| | | | || || | ||||| |||||| | || | | ||| || || ||
Sbjct 10622714 CAAGAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGATCTGGTG 10622655
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
| || ||||| ||||| ||||||| || ||| | || || || || | | || |
Sbjct 10622654 GGATCCCTTCTTTGTCCTGAATTTTGGCCTTGACATTATCGATTGTGTCTGAACTCTCAA 10622595
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || ||||||||||| || || || || || ||||| |||||||||
Sbjct 10622594 CCTCCAAAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCATA 10622545
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAAT-CGCTGAGAATTCTCGCGTC 15023
|| || || |||||||| || || || || |||||||||| ||| || | | | ||
Sbjct 22901104 AACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAAG-GTACGACCATC 22901046
Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083
|| || ||||| || ||| | ||||| | ||| ||||| || || |||||||| ||
Sbjct 22901045 CTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCCTTATC 22900986
Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143
|| ||| || || | || ||||| || | | || || || ||||| |||||
Sbjct 22900985 CTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACCTCCAAGGTGATGGT 22900926
Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || |||||||| ||||||
Sbjct 22900925 CTTTCCGGTGAGAGTCTTCACAAAAATCTGCATA 22900892
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| || | | ||| ||||| || || || ||||| || || |||||||| ||
Sbjct 8749464 CCACCTCTTAACCGGAGAACCAAATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCC 8749523
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | | ||||||| || || |||||| | ||||| | || ||||| ||
Sbjct 8749524 AAGG-TACGGCCATCTTCTAGCTGCTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGG 8749582
Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||| ||||||||||| || ||||| || ||| | || || || || | || |
Sbjct 8749583 AATGCCTTCCTTGTCCTGGATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAA 8749641
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || | || ||||| ||||| || || ||||| ||||||| ||||||
Sbjct 8749642 CCTCGAGAGTGATGGTCTTACCAGTGAGTGTTTTCACAAAAACTTGCAT 8749690
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||| |||| | || || | ||||||||||| || || || ||||||||||| |||
Sbjct 905192 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 905251
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
| | | | | || || | ||||| |||||| | || | | ||||||||| |||
Sbjct 905252 AA-AGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 905310
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| ||||||||||| ||| || || ||| | || || || || | || ||
Sbjct 905311 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 905370
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || || || || || || ||||| || ||||||
Sbjct 905371 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 905419
>seq5
Length=21221946
Score = 100 bits (110), Expect = 2e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||| || || || || || |||||||| ||| ||| | | ||||||| | ||
Sbjct 20743176 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCTTCCAGCTG 20743117
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||| || ||| | ||||| ||||| ||||| ||| |||||||||||||| || ||
Sbjct 20743116 TTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTT 20743057
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
||| ||| | || || || ||| ||| || |||| ||| ||||| || || ||
Sbjct 20743056 CGCTTTCACATTGTCGATGGTGTCGGACGATTCAACCTCTAGGGTTATGGTCTTCCCCGT 20742997
Query 15153 CAGAGTTTTTACAAAAATTTGCATATTT 15180
|| ||||| || || || ||||| |||
Sbjct 20742996 TAGGGTTTTCACGAAGATCTGCATCTTT 20742969
>seq4
Length=23328337
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| ||||| || ||||| ||||| || |||||||| || ||| |||| |||| ||
Sbjct 15771359 ACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCGTCCTCA 15771418
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || || || | || | | ||||||||| |||||||||||||||||
Sbjct 15771419 AGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGAATTCCTTCCTTGTCCTGG 15771478
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| ||| ||| ||| | || || || || | | || || || | |||||| ||||||
Sbjct 15771479 ATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACCTCGAGGGTAATTGTTTTA 15771538
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || || || ||||| || ||||||
Sbjct 15771539 CCAGTGAGGGTCTTCACAAAGATCTGCATA 15771568
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | ||| || || ||||| || ||||| || || |||||||||
Sbjct 15771797 CCACCTCTTAAACGAAGAACCAAGTGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCC 15771856
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | | | ||||||| ||||| || ||| | || || | ||| ||||| |||
Sbjct 15771857 AAGGTACGACCATCTTCTAGCTGTTTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGA 15771916
Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| ||||||||||| ||| ||||| || ||| | || || || || | || ||
Sbjct 15771917 ATGCCTTCCTTGTCCTGAATCTTTGC-CTTAACATTGTCGATGGTGTCAGAGCTCTCAAC 15771975
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| | || ||||| || || || || ||||| ||||| ||||||||
Sbjct 15771976 CTCGAGAGTGATGGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 15772023
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||| |||| | || || | ||||||||||| || || || ||||||||||| |||
Sbjct 15771113 CCACCACGCAGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCT 15771172
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
| | | | | || || | ||||| |||||| | || | | ||||||||| |||
Sbjct 15771173 AA-AGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGG 15771231
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
|| ||||||||||| ||| || || ||| | || || || || | || ||
Sbjct 15771232 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCAC 15771291
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || || || || || || ||||| || ||||||
Sbjct 15771292 CTCCAAAGTTATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCATA 15771340
>seq2
Length=19320864
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| |||||||| ||||| ||||| || || |||||||| ||| | | |||| ||
Sbjct 9126720 ACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTCA 9126779
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || ||||| | || | | ||| || || || ||||||||||| || |
Sbjct 9126780 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGA 9126839
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| | || |||||||| | |||| || || || |||||||||||
Sbjct 9126840 ATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTTG 9126899
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| || || |||||||| ||||||
Sbjct 9126900 CCAGTCAACGTCTTCACAAAAATCTGCATA 9126929
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| |||||||| ||||| ||||| || || |||||||| ||| | | |||| ||
Sbjct 9215501 ACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCGAGTGTGCGACCGTCCTCA 9215560
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| || || ||||| | || | | ||| || || || ||||||||||| || |
Sbjct 9215561 AGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTATCCTGA 9215620
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| | || |||||||| | |||| || || || |||||||||||
Sbjct 9215621 ATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACCTCCAAAGTAATGGTTTTG 9215680
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| || || |||||||| ||||||
Sbjct 9215681 CCAGTCAACGTCTTCACAAAAATCTGCATA 9215710
Score = 98.7 bits (108), Expect = 7e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||||||||| || || || ||||||||||| | | | | | || || | |||
Sbjct 9126042 TGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCAAGCTGT 9126101
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | | ||||||||| ||| || || |||||||| || ||
Sbjct 9126102 TTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTA 9126161
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || ||||||||| | |||| || || || || |||||||| || ||
Sbjct 9126162 GCCTTAACATTATCGATAGTATCGGAACTTTCAACCTCCAAAGTTATGGTTTTCCCGGTA 9126221
Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177
|| || |||||||| || ||||||
Sbjct 9126222 AGGGTCTTTACAAAGATCTGCATA 9126245
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| || || | ||| ||||| || || || || || || || |||||||| ||
Sbjct 9126930 CCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCTGCC 9126989
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | | |||||||| ||||| |||||| | ||||| | ||| ||||| ||
Sbjct 9126990 AAGG-TACGACCATCTTCTAACTGTTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGG 9127048
Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||| |||||||| || ||| ||||| || ||| | || || || || | || |
Sbjct 9127049 AATACCTTCCTTATCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAA 9127107
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || | |||||||| || || || || ||||| || |||||||||||
Sbjct 9127108 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 9127156
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| || || | ||| ||||| || || || || || || || |||||||| ||
Sbjct 9215711 CCACCTCTTAACCTGAGAACCAAATGGAGTGTTGATTCCTTCTGGATATTGTAATCTGCC 9215770
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| | | | |||||||| ||||| |||||| | ||||| | ||| ||||| ||
Sbjct 9215771 AAGG-TACGACCATCTTCTAACTGTTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGG 9215829
Query 15069 AATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
||| |||||||| || ||| ||||| || ||| | || || || || | || |
Sbjct 9215830 AATACCTTCCTTATCCTGAATCTTTGCCTTA-ACATTGTCAATGGTGTCAGAGCTCTCAA 9215888
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || | |||||||| || || || || ||||| || |||||||||||
Sbjct 9215889 CCTCGAGAGTAATGGTCTTGCCAGTGAGTGTTTTCACGAAAATTTGCAT 9215937
Score = 93.3 bits (102), Expect = 3e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||||||||| || || || ||||||||||| | | | | | || || | |||
Sbjct 9214823 TGAAGGGTAGATTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGTCCATCCTCGAGCTGT 9214882
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| ||||| | || | | ||||||||| ||| || || |||||||| || ||
Sbjct 9214883 TTCCCAGCAAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGGATCTTA 9214942
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||| ||| | || ||||||||| | |||| || || || || |||||||| || ||
Sbjct 9214943 GCTTTAACATTATCGATAGTATCGGAACTTTCAACCTCCAAAGTTATGGTTTTCCCGGTA 9215002
Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177
|| || || ||||| || ||||||
Sbjct 9215003 AGGGTCTTCACAAAGATCTGCATA 9215026
Score = 87.8 bits (96), Expect = 1e-12
Identities = 148/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025
||| || ||||| || || || || || ||||||||||| ||| | | | | | || |
Sbjct 9125807 AACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCT-AAAGTCCGACCATCCT 9125865
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
| | ||||| |||||| | || | | ||||||||| ||| || || ||||||||
Sbjct 9125866 CGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCT 9125925
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
||| || || || | || || || || | || || || || |||||||| |
Sbjct 9125926 GAATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCT 9125985
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| ||||||| |||||| ||||| |||||||||
Sbjct 9125986 TGCCTGTCAAAGTTTTCACAAATATTTGCATA 9126017
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTC 15026
|| ||||| |||||||| |||||||| ||||||||||| ||| | | | | | || ||
Sbjct 9126492 ACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCTAA-AGTACGACCATCCTC 9126550
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| || || || || | || | | |||||| || || || |||||||||||
Sbjct 9126551 AAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGGGATACCTTCCTTGTCTTG 9126610
Query 15087 AAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
||| ||||| || ||| | || ||||| || | || || || || |||||||| |
Sbjct 9126611 AATCTTTGC-CTTGACATTATCAATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCT 9126669
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
| || || || || || |||||||| ||||||
Sbjct 9126670 TTCCAGTGAGGGTCTTCACAAAAATCTGCATA 9126701
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
||||||||||| || || || |||||||| || | | | | | || || | |||
Sbjct 9215279 TGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCGACCATCCTCGAGCTGT 9215338
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
|| |||||| | || | | ||||||||| ||| || ||||||||||| || ||
Sbjct 9215339 TTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATCTTA 9215398
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||| ||| | || ||||| || | || || || || |||||||| || || ||
Sbjct 9215399 GCTTTAACATTATCGATAGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTCTTTCCAGTG 9215458
Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177
|| || || |||||||| ||||||
Sbjct 9215459 AGGGTCTTCACAAAAATCTGCATA 9215482
Score = 82.4 bits (90), Expect = 5e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| |||||||| || ||||| ||||||||||| || | | | ||||| | ||
Sbjct 9215050 ATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGTCCATCTTCAAGCTG 9215109
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| || || | || | | ||||||||| ||| || || |||||||| ||| ||
Sbjct 9215110 CTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTT 9215169
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
|| || | || || || || | || || || || |||||||| || |||||
Sbjct 9215170 AGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTTGCCTGT 9215229
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
|| |||||| ||||| |||||||||
Sbjct 9215230 CAAAGTTTTCACAAATATTTGCATA 9215254
>seq1
Length=33132539
Score = 98.7 bits (108), Expect = 7e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| |||||||| || || ||||| || ||||||||||| ||| |||| | |||||
Sbjct 10397106 ACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGCGAGTGTTCTTCCATCTTCC 10397047
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|||||||| || ||| | || || || || || || ||| |||||||| ||||| |
Sbjct 10397046 AATTGTTTTCCGGCGAAGATTAACCGTTGCTGATCCGGTGGGATTCCTTCTTTGTCTTGA 10396987
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| | || || || || ||| || |||| ||| || || ||
Sbjct 10396986 ATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAACCTCTAGGGTTATTGTCTTC 10396927
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| || || ||||| || || || ||||| ||
Sbjct 10396926 CCCGTTAGGGTTTTCACGAAGATCTGCATTTT 10396895
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | || | ||| || || || |||||||| |||||||||||
Sbjct 29080840 CCACCTCTCAGACGAAGCACGAGATGGAGAGTTGATTCTTTTTGGATGTTGTAATCTGCA 29080781
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| ||| | || || | ||||| |||||| | || | | |||||| || ||
Sbjct 29080780 AGCGTTCGACCATCCTCGAGCTGTTTACCAGCGAAGATTAGTCTCTGTTGATCCGGAGGG 29080721
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|||||||||||||| || || ||| || | || || || || | | || ||
Sbjct 29080720 ATTCCTTCCTTGTCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCTGAACTCTCGACT 29080661
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||||||||||||||| || || || || | || || ||||||
Sbjct 29080660 TCTAGGGTAATGGTTTTACCGGTGAGCGTCTTGATGAATATCTGCATA 29080613
>seq7
Length=24649197
Score = 95.1 bits (104), Expect = 9e-15
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTT 15025
||| ||||| || || || ||||| || ||||||||||| ||| || ||| | || |
Sbjct 18993917 AACCAAATGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCT-AGGGTTCGACCATCCT 18993975
Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085
| | ||| ||||||||| | || | | ||| ||||| || ||| ||||||| ||
Sbjct 18993976 CAAGTTGCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGCAGGGATTTCTTCCTTATCTT 18994035
Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145
||| || ||| ||| | || || || || | || || |||| ||||||||||
Sbjct 18994036 GAATCTTAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTTC 18994095
Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || || || ||||| ||||| ||||||||
Sbjct 18994096 TGCCAGTAAGGGTTTTCACAAATATTTGCAT 18994126
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || || ||||| ||||||||||| || | | | || || | |||
Sbjct 18993696 TGGAGTGTTGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCATCCTCAAGTTGC 18993755
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
||||||||| | || | | ||||||||| || |||||||| ||||| ||| ||
Sbjct 18993756 TTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGAGGGATTCCTTCTTTGTCTTGAATCTTA 18993815
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
||| || | || || || || | || || |||| |||||||||||||| ||
Sbjct 18993816 GCTTTCACGTTGTCAATGGTGTCTGAGCTCTCAACTTCTAGAGTAATGGTTTTACCGGTA 18993875
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
|||||||| ||||| || |||||
Sbjct 18993876 AGAGTTTTCACAAATATCTGCAT 18993898
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||||||||| || || || || ||||||||||| ||| | | | || || | ||
Sbjct 18994379 ATGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGAGTACGGCCATCCTCGAGCTG 18994438
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| || ||| | || | | ||||||||| | || |||||||||||||| || ||
Sbjct 18994439 CTTACCGGCGAAGATAAGTCTCTGTTGGTCCGTAGGGATTCCTTCCTTGTCTTCGATCTT 18994498
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || || | || || ||||| |||| || || | ||| || || || |||||
Sbjct 18994499 GGCCTTGACGTTATCGATGGTATCTGAGCTTTCGACCTCAAGGGTTATCGTCTTCCCTGT 18994558
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
||||| || ||||| ||||||||
Sbjct 18994559 AAGAGTCTTAACAAAGATTTGCAT 18994582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357388968422360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |