Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq7 127 2e-24
seq2 127 2e-24
seq6 120 3e-22
seq4 118 1e-21
seq5 105 6e-18
seq1 104 2e-17
>seq7
Length=24649197
Score = 127 bits (140), Expect = 2e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | |||||| || || || ||||| ||||||||||| || |||||
Sbjct 18993669 ATCCCACCACGAAGACGCAACACAAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAATCC 18993728
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | ||| || || ||| | || | || || ||||||||
Sbjct 18993729 GCAAGGGTGCGACCATCCTCAAGTTGCTTGCCAGCGAAGATAAGTCTCTGTTGGTCCGGA 18993788
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || |||||||| |||||||| || ||| | || | || | |||||| || |||
Sbjct 18993789 GGGATTCCTTCTTTGTCTTGAATCTTAGCTTTCA-CGTTGTCAATGGTGTCTGAGCTCTC 18993847
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| ||||||| ||||| ||||| |||||||| ||||| || ||||||
Sbjct 18993848 AACTTCTAGAGTAATGGTTTTACCGGTAAGAGTTTTCACAAATATCTGCATC 18993899
Score = 102 bits (112), Expect = 7e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCTGACGGTTTTAGAATCGTCCAATT 45195
||| || |||||||| || ||||| || ||||| ||| | |||| | ||| || | ||
Sbjct 18993923 ATGGAGAGTTGATTCTTTCTGGATGTTGTAATCTGCT-AGGGTTCGACCATCCTCAAGTT 18993981
Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255
| || || ||| | || | || |||||||||| || || |||| ||||||||||| |
Sbjct 18993982 GCTTGCCAGCGAAGATAAGTCTCTGCTGGTCCGCAGGGATTTCTTCCTTATCTTGAATCT 18994041
Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
| ||| | || | |||||| || ||| ||||| || |||| ||| |||| |
Sbjct 18994042 TAGCTTTCACATTGTCAATGGTGTCTGAGCTCTCAACTTCTAGGGTAATGGTTCTGCCAG 18994101
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| || ||||| ||||| ||||||||
Sbjct 18994102 TAAGGGTTTTCACAAATATTTGCAT 18994126
>seq2
Length=19320864
Score = 127 bits (140), Expect = 2e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || ||||||||||| |||||||| ||||| | ||| | ||| || || ||
Sbjct 9126953 ATGGAGTGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCTAACTG 9127012
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
||| || ||| | ||||||| |||||||| || ||||| ||||| ||||| ||||| ||
Sbjct 9127013 TTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGAATCTT 9127072
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| || | || | |||||| || ||| || |||||||||| || ||||| ||
Sbjct 9127073 TGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 9127132
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 9127133 GAGTGTTTTCACGAAAATTTGCATC 9127157
Score = 127 bits (140), Expect = 2e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || ||||||||||| |||||||| ||||| | ||| | ||| || || ||
Sbjct 9215734 ATGGAGTGTTGATTCCTTCTGGATATTGTAATCTGCCAAGGTACGACCATCTTCTAACTG 9215793
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
||| || ||| | ||||||| |||||||| || ||||| ||||| ||||| ||||| ||
Sbjct 9215794 TTTACCAGCGAAGATCAATCTCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGAATCTT 9215853
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| || | || | |||||| || ||| || |||||||||| || ||||| ||
Sbjct 9215854 TGCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGT 9215913
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || ||||||||||||
Sbjct 9215914 GAGTGTTTTCACGAAAATTTGCATC 9215938
>seq6
Length=25113588
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || |||||||| || |||||||| |||||| | | ||| | ||| || | |||
Sbjct 905900 TGGAGGGTTGATTCTTTCTGGATATTGTAATCGGTCAAGGTACGACCATCTTCTAGCTGT 905959
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || |||| ||||||||||| ||||||||||| || || ||||| |||
Sbjct 905960 TTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTT 906019
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | |||||| || ||| || |||||||| | || ||||| ||
Sbjct 906020 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTG 906079
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| ||||| |||||||||
Sbjct 906080 AGTGTTTTCACAAAGATTTGCATC 906103
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || |||||||| | || ||||| || || || ||||| ||||| || || ||
Sbjct 22758794 ATACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCA 22758853
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| |||| | ||| ||||| || ||||| ||| | ||||| | ||||| |||||
Sbjct 22758854 GCAAGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGA 22758913
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || || ||||||||||| || || | || | || | ||||| ||| |||
Sbjct 22758914 GGAATACCCTCCTTATCTTGAATCTTGGCCTTCA-CGTTGTCGATAGTGTCAGAACTCTC 22758972
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||| || || ||||| || || || ||||| |||||
Sbjct 22758973 CACCTCAAGAGTAATCGTCTTCCCCGTTAGGGTCTTGACGAAAATCTGCAT 22759023
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || || | |||||| || || || ||||||||||| |||||||| |||||
Sbjct 8748549 ATTCCACCACGCAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGGATATTGTAATCC 8748608
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||||| || ||| | || | || || ||||| ||
Sbjct 8748609 GCAAGTGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGT 8748668
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| || |||||||| || |||| || | ||||| || ||||
Sbjct 8748669 GGGATCCCTTCCTTGTCTTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCG 8748728
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||||| ||||| ||||| || || || |||||||| |||||
Sbjct 8748729 ACCTCAAGAGTAATGGTTTTTCCGGTAAGTGTCTTCACAAAAATCTGCAT 8748778
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | |||||| | || || || || ||||| ||||| || |||||
Sbjct 22901122 ATACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 22901063
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| |||||||| ||| | ||||| | |||||||||||
Sbjct 22901062 GCCAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 22901003
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| ||||| || || || || | || | || | ||||| ||| |||
Sbjct 22901002 GGGATACCTTCCTTATCCTGGATCTTGGCCTTCA-CGTTGTCAATAGTGTCTGAACTCTC 22900944
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | || | || || ||||| ||||| || |||||||| |||||
Sbjct 22900943 CACCTCCAAGGTGATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
||| || |||||||| || |||||||| ||||| | ||| ||| || | ||
Sbjct 8749487 ATGGAGTGTTGATTCTTTCTGGATATTGTAATCAGCCAAGGTACGGCCATCTTCTAGCTG 8749546
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| || ||| | ||||||| |||||||||||| ||||||||||| || || || || ||
Sbjct 8749547 CTTACCAGCGAAGATCAATCTTTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTT 8749606
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
| || | || | |||||| || ||| || |||||||| | || || || ||
Sbjct 8749607 TGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTACCAGT 8749666
Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| ||||||| |||||||
Sbjct 8749667 GAGTGTTTTCACAAAAACTTGCATC 8749691
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || |||||||| || ||||| || |||||| | || ||| || | |||
Sbjct 10622064 TGGAGAGTTGATTCTTTCTGGATGTTGTAATCGGCCAAAGTACGGCCATCTTCTAGCTGT 10622005
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || |||| ||||||||| | ||||| ||||| || || ||||| |||
Sbjct 10622004 TTACCGGCGAAGATTAATCTTTGCTGGTCTAGAGGAATCCCTTCCTTGTCCTGAATCTTT 10621945
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | |||||| || ||| || |||||||||| || ||||| ||
Sbjct 10621944 GCCTTAACATTGTCAATGGTGTCAGAGCTCTCAACCTCGAGAGTAATGGTCTTGCCAGTG 10621885
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| |||||||||||||||
Sbjct 10621884 AGTGTTTTCACAAAAATTTGCATC 10621861
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | |||||| || || || ||||||||||| || ||||| |||||
Sbjct 10622775 ATGCCACCACGAAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCC 10622716
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||||| || ||| | || | || ||||| || ||
Sbjct 10622715 GCAAGAGTCCGACCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGATCTGGT 10622656
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || |||||||| || |||||||| |||| || | ||||| ||| |||
Sbjct 10622655 GGGATCCCTTCTTTGTCCTGAATTTTGGCCTTGACATTATCGATTGTGTCTGAACTCTCA 10622596
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 10622595 ACCTCCAAAGTAATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCAT 10622546
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || ||||| | || ||||| || || || ||||| ||||| || || ||
Sbjct 23403964 ATACCACCACGAAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCA 23403905
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| |||| | ||| ||||| || ||||| ||| | ||||| | ||||| |||||
Sbjct 23403904 GCAAGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGA 23403845
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || || || | | || | | | || | || | |||||| || ||
Sbjct 23403844 GGAATGCCTTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTC 23403786
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || | || || ||||| ||||| || || || || ||||||
Sbjct 23403785 CACCTCAAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 23403734
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | ||| | || || || || |||||||||||||| || ||
Sbjct 22901575 CCACCACGGAGACGGAGCACCAAGTGAAGAGTAGACTCCTTTTGGATATTGTAGTCAGCC 22901516
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| | ||| || | |||||||| ||| | || | || ||||||||||| ||
Sbjct 22901515 AAGGTGCGACCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 22901456
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|| ||||| || || || || || || | || | || | |||||| || ||| ||
Sbjct 22901455 ATACCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTCTCTAC 22901397
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| |||| || || ||||| ||||| || || ||||| |||||
Sbjct 22901396 CTCGAGGGTAATGGTCTTCCCGGTCAGAGTCTTCACGAAAATCTGCAT 22901349
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | |||||| | || || || || ||||| ||||| || |||||
Sbjct 22886531 ATACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 22886472
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| |||||||| ||| | ||||| | |||||||||||
Sbjct 22886471 GCCAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 22886412
Query 45231 GGAATGCCTTCTTTATCTTGAATTTT 45256
|| || ||||| ||||| || || ||
Sbjct 22886411 GGGATACCTTCCTTATCCTGGATCTT 22886386
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | |||||| | || || || || ||||| ||||| || |||||
Sbjct 23069540 ATACCTCCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCC 23069481
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| ||||| |||||||| ||| | ||||| | |||||||||||
Sbjct 23069480 GCCAAGGTACGACCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 23069421
Query 45231 GGAATGCCTTCTTTATCTTGAATTTT 45256
|| || ||||| ||||| || || ||
Sbjct 23069420 GGGATACCTTCCTTATCCTGGATCTT 23069395
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | ||| ||||| || || || ||||||||||| || |||||
Sbjct 8748777 ATACCACCACGGAGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCT 8748836
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||||| || || | || | || |||||||| ||
Sbjct 8748837 GCAAGAGTCCGACCATCTTCGAGCTGTTTCCCAGCAAAGATGAGTCTCTGCTGGTCTGGT 8748896
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| || |||||||| ||| |||| || | || | ||||| || |||
Sbjct 8748897 GGGATCCCTTCCTTGTCTTGAATCTTTGCCTTGA-CGTTATCGATTGTGTCTGAGCTCTC 8748955
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || ||||| ||||| || || ||||| || |||||
Sbjct 8748956 AACCTCCAAAGTGATAGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 8749006
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| || || |||||||| | || | || || || |||||||| ||||| || |||||
Sbjct 22886248 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCA 22886189
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | ||| ||||| || ||||| ||| | || | | ||||| |||||
Sbjct 22886188 GCCAACG-TACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGG 22886130
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288
||||||||||| || || || | | || | || | || | || | |||||| || |
Sbjct 22886129 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTT 22886071
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || || | || || ||||| |||||||| || || || ||||||
Sbjct 22886070 CCACCTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 22886018
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| || || |||||||| | || | || || || |||||||| |||||||| |||||
Sbjct 22900438 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCA 22900379
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | ||| || | |||||||| ||| | || | | |||||| |||||
Sbjct 22900378 GCCAACG-TGCGGCCATCTTCTAGCTGTTTTCCGGCGAAAATAAGCCTTTGCTGATCCGG 22900320
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288
||||||||||| || || || | | || | | | || | || | |||||| || |
Sbjct 22900319 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTT 22900261
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || ||||| || | || || ||||| || || || ||||| || ||||||
Sbjct 22900260 CCACCTCGAGGGTGATAGTCTTTCCGGTGAGTGTCTTAACAAAGATCTGCATC 22900208
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || ||||| | ||| | || || || || ||||| ||||| || || ||
Sbjct 22901350 ATACCACCACGAAGCCTTAGCACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCC 22901291
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | |||||||| ||| | || | || |||||||||||
Sbjct 22901290 GCCAAAGTACGCCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 22901231
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || || || || || || | || | || | |||||| || |||
Sbjct 22901230 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGTTGTCAATGGTGTCAGAGCTCTC 22901172
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| ||||| | ||| ||||| || | ||| || || || || |||||
Sbjct 22901171 GACTTCAAGAGTGATCGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 22901121
Score = 86.0 bits (94), Expect = 6e-12
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| || || |||||||| | || | || || || |||||||| ||||| || |||||
Sbjct 23069257 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCA 23069198
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | ||| ||||| || ||||| ||| | || | | ||||| |||||
Sbjct 23069197 GCCAACG-TACGGCCATCCTCCAACTGCTTTCCGGCGAAAATAAGCCTCTGCTGATCCGG 23069139
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288
||||||||||| || || || | | || | || | || | || | |||||| || |
Sbjct 23069138 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCTTTAACGTTGTCGATGGTGTCAGAGCTTT 23069080
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || || || || | || || ||||| |||||||| || || || ||||||
Sbjct 23069079 CCACCTCAAGGGTGATAGTCTTTCCGGTGAGAGTTTTAACGAAGATCTGCATC 23069027
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| || || | ||| || | || || || || ||||| || || || |||||
Sbjct 23404192 ATACCTCCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCA 23404133
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | ||| ||||| ||| | ||||| | |||||||||||
Sbjct 23404132 GCCAAAGTTCTGCCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 23404073
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || ||||| ||||| || || ||| | || | || | |||||| || |||
Sbjct 23404072 GGGATACCCTCTTTGTCTTGGATCTTGGCTTTCA-CGTTGTCGATGGTGTCAGAGCTCTC 23404014
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | || || || || | ||| || |||||||| |||||
Sbjct 23404013 CACCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCAT 23403963
Score = 82.4 bits (90), Expect = 7e-11
Identities = 161/233 (69%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169
|| || || |||||||| | || | || || || |||||||| |||||||| |||||
Sbjct 22759022 ATACCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGATTCCTTCTGGATATTGTAATCA 22759081
Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229
|| ||| | ||| || | |||||||| ||| | || | | ||||| |||||
Sbjct 22759082 GCCAACG-TACGGCCATCCTCTAGCTGTTTTCCGGCGAAAATAAGCCTCTGCTGATCCGG 22759140
Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288
||||||||||| || || || | | || | | | || | || | |||||| || |
Sbjct 22759141 AGGAATGCCTTCCTTGTCCTGGA-TCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTT 22759199
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| || ||||| || | || || ||||| ||||| || || || || ||||||
Sbjct 22759200 CCACCTCGAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATC 22759252
>seq4
Length=23328337
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || || || |||||||||||||| ||||| || ||||||
Sbjct 22908956 CCACCACGGAGACGAAGGACAAGGTGAAGCGTTGATTCCTTCTGGATGTTGTAATCGGCT 22908897
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || || | || ||||| ||| | |||||||| ||||| ||||| ||
Sbjct 22908896 AAGGTACGTCCGTCTTCGAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGATCCGGTGGG 22908837
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || ||||| || || |||| || | |||||| || ||||||||
Sbjct 22908836 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCGACC 22908777
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|||||||| | ||| || || ||||| ||||| || || || ||||||
Sbjct 22908776 TCGAGAGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 22908729
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || |||||||| || |||||||| |||||| | ||| | ||| || | |||
Sbjct 15771821 TGGAGGGTTGATTCTTTCTGGATATTGTAATCGGCCAAGGTACGACCATCTTCTAGCTGT 15771880
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | || |||| ||||||||||| ||||||||||| || || ||||| |||
Sbjct 15771881 TTACCGGCGAAGATTAATCTCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGAATCTTT 15771940
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|| | || | |||||| || ||| || |||||||| | || ||||| ||
Sbjct 15771941 GCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCAGTG 15772000
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| ||||| |||||||||
Sbjct 15772001 AGTGTTTTCACAAAGATTTGCATC 15772024
>seq5
Length=21221946
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | | || ||||| ||||| || ||||| ||||| || || ||| |
Sbjct 20743199 CCACCACGGAGACGGAGGACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 20743140
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| || |||| ||||| || ||| | |||||||| ||||||||||| ||
Sbjct 20743139 AGGGTACGGCCGTCTTCCAGCTGTTTCCCGGCGAAAATCAATCGCTGCTGGTCCGGTGGG 20743080
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293
|| ||||| || ||||| || || ||| | || | ||||||||| || || ||
Sbjct 20743079 ATTCCTTCCTTGTCTTGGATCTTCGCTTTCACATTGTCGATGGTGTCGGACGATTCAACC 20743020
Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || | || || || ||||| ||||| || || || ||||||
Sbjct 20743019 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 20742972
>seq1
Length=33132539
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190
||| | ||| ||||| || || || || || || ||||| || ||| | ||| ||
Sbjct 10397107 CACCAAATGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGCGAGTGTTCTTCCATCTTC 10397048
Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250
|||||||||||| ||| | || || |||||||| ||||| || || |||||||| |||||
Sbjct 10397047 CAATTGTTTTCCGGCGAAGATTAACCGTTGCTGATCCGGTGGGATTCCTTCTTTGTCTTG 10396988
Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
||| || ||| | || | ||||| || || || || || || || | || ||
Sbjct 10396987 AATCTTCGCTTTCACATTGTCGATTGTGTCTGATGATTCAACCTCTAGGGTTATTGTCTT 10396928
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| ||||| || || || |||||
Sbjct 10396927 CCCCGTTAGGGTTTTCACGAAGATCTGCAT 10396898
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| |||| ||| ||||| || || || || || ||||| || |||||
Sbjct 29081071 ATACCACCACGGAGTCTCAGCACGAGATGGAGGGTCGACTCTTTCTGGATGTTGTAATCA 29081012
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || | ||| || | ||| || ||||| | || | || || ||||| ||
Sbjct 29081011 GCAAGAGTGCGACCATCTTCGAGTTGCTTGCCTGCAAAGATGAGTCTCTGTTGGTCTGGT 29080952
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || |||||||| ||||| || || || | || | || | ||||| || |||
Sbjct 29080951 GGGATCCCTTCTTTGTCTTGTATCTTGGCCTTCA-CGTTATCGATTGTGTCTGAGCTCTC 29080893
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||| | ||||||||||| || || || || ||||| |||||
Sbjct 29080892 AACTTCCAAAGTTATGGTTTTGCCGGTAAGGGTCTTGACGAAAATCTGCAT 29080842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451999267572160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |