Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq696 682 0.0
seq2 572 2e-158
seq74 253 3e-62
>seq696
Length=154923
Score = 682 bits (756), Expect = 0.0
Identities = 747/993 (75%), Gaps = 0/993 (0%)
Strand=Plus/Plus
Query 7528 CTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCAT 7587
|||| ||||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||
Sbjct 378 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 437
Query 7588 GCCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATC 7647
||||| ||||||||| | | || ||||| || || | ||||| ||||||| |||
Sbjct 438 ACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACACGTCCTTGACTATC 497
Query 7648 AATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAG 7707
|| | || |||||||| |||||||| || |||||||| ||||| || |||| ||| |
Sbjct 498 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAA 557
Query 7708 AGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGA 7767
|||||| ||||| || || || || ||||| || || | |||||| || | ||||| ||
Sbjct 558 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 617
Query 7768 GTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGAT 7827
|||||||| ||| ||||||||||||| || ||||| || ||||||||||| || ||
Sbjct 618 ATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAAT 677
Query 7828 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGT 7887
|||||| || ||||||||||| ||||| | ||||| | || || ||| || ||
Sbjct 678 GTTGTAAGTTTCTTCTTCTTGCCCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGT 737
Query 7888 GGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACC 7947
|||||| | | || | ||| ||||| | ||||||||||| ||||| || || || ||
Sbjct 738 GGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAAAAGGGAGCC 797
Query 7948 ACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGC 8007
|| || |||||||| || || | |||||| || |||||||| || ||||||||||| ||
Sbjct 798 GCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGAATGTTGTGCTCAGC 857
Query 8008 TTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAA 8067
||||| |||| ||| ||||||| ||||||||||| || ||||||||| | ||||| ||
Sbjct 858 CTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAA 917
Query 8068 AGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGA 8127
| || ||||| | ||||||| | ||| ||||||| || || ||||| ||||| ||
Sbjct 918 ACTTCCCTGACCAATTGGATAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGA 977
Query 8128 GTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACC 8187
||||| || ||||| ||||||||||| |||||| || ||||||||||||||||||
Sbjct 978 ATATGCAACCGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 1037
Query 8188 CATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTT 8247
||| || | | ||| | | ||||| | | || |||| |||||||||||||
Sbjct 1038 CATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 1097
Query 8248 GTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGC 8307
||| ||||| ||||||| || || ||||||||||| || || || || | |||||||||
Sbjct 1098 GTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAGC 1157
Query 8308 GTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGC 8367
||||| ||||| || ||||| || || || ||||| || || | || || ||||
Sbjct 1158 TGCAGAAGTAGGAATAATGGCACCGGAAATAATATTGTTTCCGTAAAGAAGAGATCCAGA 1217
Query 8368 GACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA 8427
|| |||||||| || || ||||| || || ||||||||||| | ||| |||| || ||
Sbjct 1218 AACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAATGCGATAATAAA 1277
Query 8428 ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAG 8487
| || || | | | ||||| ||||||| ||||| ||||| || | || ||
Sbjct 1278 AACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAG 1337
Query 8488 ACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520
||| || | ||| ||||| ||||||||||||
Sbjct 1338 ACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1370
Score = 572 bits (634), Expect = 2e-158
Identities = 737/1014 (73%), Gaps = 2/1014 (0%)
Strand=Plus/Minus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||||||| || | ||| | || || ||||| |||| || ||||||||| || |||||
Sbjct 33730 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 33671
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| |||||||| ||||| | |||||| || || || || || || |||||||| |||
Sbjct 33670 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 33611
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || |||||||| |||||||| | ||| || || ||||| |||||||| || | |||
Sbjct 33610 TCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 33551
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| | || ||||| | | |||| | |||| | ||| | || || |||||
Sbjct 33550 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 33491
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
| |||||||||||||| |||||| |||||| || || | |||||||| || |||||
Sbjct 33490 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 33431
Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622
|| || ||||| |||||||| ||||| || || || |||| || || | ||| || |
Sbjct 33430 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 33371
Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682
|| ||||||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct 33370 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 33311
Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742
|| || |||| || | || | | ||| || || |||||||||||||| ||||| |
Sbjct 33310 GCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 33251
Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802
||||| || || || || || | ||||| | ||| || ||||| || || ||||||||
Sbjct 33250 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 33191
Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862
|||||||||||||||| || || || || ||||| || || |||||||| |||||
Sbjct 33190 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 33131
Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921
||||||||||||||||| || ||||||||||| || || || | | || ||| || ||
Sbjct 33130 ACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGAGC 33072
Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981
| ||||| || || | ||| |||||||| | || || || |||||||| || |||||
Sbjct 33071 AAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAA 33012
Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041
|| |||||| || || | ||| ||| || |||||||| || ||||| ||||||||
Sbjct 33011 AGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 32952
Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101
|| | | | ||||| | | | | ||||||||| || || ||||| || | ||
Sbjct 32951 CAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAA 32892
Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161
||| || || || | ||| ||| || | || ||||| ||||| || || || ||
Sbjct 32891 ATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAAGGT 32832
Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221
||| || |||| |||||| || | || | || ||| ||| || || | ||||| ||
Sbjct 32831 TGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACCAGA 32772
Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275
|||||| ||||||||||| | || | | | ||||||||| | | ||||||
Sbjct 32771 CCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 32718
>seq2
Length=19320864
Score = 572 bits (634), Expect = 2e-158
Identities = 737/1014 (73%), Gaps = 2/1014 (0%)
Strand=Plus/Plus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||||||| || | ||| | || || ||||| |||| || ||||||||| || |||||
Sbjct 8802672 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 8802731
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| |||||||| ||||| | |||||| || || || || || || |||||||| |||
Sbjct 8802732 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 8802791
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || |||||||| |||||||| | ||| || || ||||| |||||||| || | |||
Sbjct 8802792 TCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 8802851
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| | || ||||| | | |||| | |||| | ||| | || || |||||
Sbjct 8802852 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 8802911
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
| |||||||||||||| |||||| |||||| || || | |||||||| || |||||
Sbjct 8802912 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 8802971
Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622
|| || ||||| |||||||| ||||| || || || |||| || || | ||| || |
Sbjct 8802972 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 8803031
Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682
|| ||||||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct 8803032 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 8803091
Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742
|| || |||| || | || | | ||| || || |||||||||||||| ||||| |
Sbjct 8803092 GCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 8803151
Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802
||||| || || || || || | ||||| | ||| || ||||| || || ||||||||
Sbjct 8803152 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 8803211
Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862
|||||||||||||||| || || || || ||||| || || |||||||| |||||
Sbjct 8803212 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 8803271
Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921
||||||||||||||||| || ||||||||||| || || || | | || ||| || ||
Sbjct 8803272 ACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGAGC 8803330
Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981
| ||||| || || | ||| |||||||| | || || || |||||||| || |||||
Sbjct 8803331 AAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAA 8803390
Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041
|| |||||| || || | ||| ||| || |||||||| || ||||| ||||||||
Sbjct 8803391 AGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 8803450
Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101
|| | | | ||||| | | | | ||||||||| || || ||||| || | ||
Sbjct 8803451 CAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAA 8803510
Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161
||| || || || | ||| ||| || | || ||||| ||||| || || || ||
Sbjct 8803511 ATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAAGGT 8803570
Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221
||| || |||| |||||| || | || | || ||| ||| || || | ||||| ||
Sbjct 8803571 TGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACCAGA 8803630
Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275
|||||| ||||||||||| | || | | | ||||||||| | | ||||||
Sbjct 8803631 CCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 8803684
Score = 569 bits (630), Expect = 3e-157
Identities = 736/1014 (73%), Gaps = 2/1014 (0%)
Strand=Plus/Minus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||||||| || | ||| | || || ||||| |||| || ||||||||| || |||||
Sbjct 9135807 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 9135748
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| |||||||| ||||| | |||||| || || || || || || |||||||| |||
Sbjct 9135747 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 9135688
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || |||||||| |||||||| | ||| || || ||||| |||||||| || | |||
Sbjct 9135687 TCAAATTCTGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 9135628
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| | || ||||| | | |||| | |||| | ||| | || || |||||
Sbjct 9135627 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 9135568
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
| |||||||||||||| |||||| |||||| || || | |||||||| || |||||
Sbjct 9135567 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 9135508
Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622
|| | ||||| |||||||| ||||| || || || |||| || || | ||| || |
Sbjct 9135507 AAGCTGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 9135448
Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682
|| ||||||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct 9135447 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 9135388
Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742
|| || |||| || | || | | ||| || || |||||||||||||| ||||| |
Sbjct 9135387 GCGCATAGCAGAGCCGCGCCCAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 9135328
Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802
||||| || || || || || | ||||| | ||| || ||||| || || ||||||||
Sbjct 9135327 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 9135268
Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862
|||||||||||||||| || || || || ||||| || || |||||||| |||||
Sbjct 9135267 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 9135208
Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921
||||||||||||||||| || ||||||||||| || || || | | || ||| || ||
Sbjct 9135207 ACAGCAATGGGACCAGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGAGC 9135149
Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981
| ||||| || || | ||| |||||||| | || || || |||||||| || |||||
Sbjct 9135148 AAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAA 9135089
Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041
|| |||||| || || | ||| ||| || |||||||| || ||||| ||||||||
Sbjct 9135088 AGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 9135029
Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101
|| | | | ||||| | | | | ||||||||| || || ||||| || | ||
Sbjct 9135028 CAGTAACAACAAAGAATGCGCTAAACTATTAGCAGGAGTAGAAACTGCAGCGGTTAAAAA 9134969
Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161
||| || || || | ||| ||| || | || ||||| ||||| || || || ||
Sbjct 9134968 ATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAAGGT 9134909
Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221
||| || |||| |||||| || | || | || ||| ||| || || | ||||| ||
Sbjct 9134908 TGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACCAGA 9134849
Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275
|||||| ||||||||||| | || | | | ||||||||| | | ||||||
Sbjct 9134848 CCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 9134795
Score = 545 bits (604), Expect = 3e-150
Identities = 728/1014 (72%), Gaps = 22/1014 (2%)
Strand=Plus/Minus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||||||| || | ||| | || || ||||| |||| || ||||||||| || |||||
Sbjct 12219215 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 12219156
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| | |||||| ||||| | |||||| || || || || || || |||||||| |||
Sbjct 12219155 TGAGCCGTCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTAGTATAGAAAGTC 12219096
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || |||||||| |||||||| | ||| || | |||||||||||||| || | |||
Sbjct 12219095 TCAAATTCTGGATCTTCCGCTGCACAGATTTCCTAGGAAACAAAGTCATAGGCACGTAGG 12219036
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| | || ||||| | | |||| | |||| | ||| | || || |||||
Sbjct 12219035 TTCAAAGCTAGACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 12218976
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
| |||||||||||||| |||||| |||||| || || | |||||||| || |||||
Sbjct 12218975 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGTGACCAA 12218916
Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622
|| || ||||| |||||||| ||||| || || || |||| || || | ||| || |
Sbjct 12218915 AAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGG 12218856
Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682
|| ||||||| |||||||||||||| |||||||| |||||||||||| | ||||||
Sbjct 12218855 AATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCAACATGAATA 12218796
Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742
|| || |||| || | || | | ||| || || |||||||||||||| ||||| |
Sbjct 12218795 GCGCATAGCAGAGCCGCGCCAAGTACACCGGCGACTCCCATCATATGAAATGGGTTCAAT 12218736
Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802
||||| || || || || || | ||||| | ||| || ||||| || || ||||||||
Sbjct 12218735 GTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCCGCTACACCAAAA 12218676
Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862
|||||||||||||||| || || || || ||||| || || |||||||| |||||
Sbjct 12218675 CTAGGCGCAAAGAACCAACCAGATTGACCTAGTGGATAAATTAGGAAGACAGAAACAAAA 12218616
Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921
||||||||||||||||| || ||||||||||| || || || | | || ||| || ||
Sbjct 12218615 ACAGCAATGGGACCAGAGAATGCGATTGCATTATATGGTCGCA-ATTGAACAGATCGAGC 12218557
Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981
| ||||| || || | ||| |||||||| | || || || |||||||| || |||||
Sbjct 12218556 AAGTTCAAATTGACGTAACATAAAACCTATTAATGCGAAAGCGCCGTGGAGAGCAACAAA 12218497
Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041
|| |||||| || || | ||| ||| || |||||||| || ||||| ||||||||
Sbjct 12218496 AGCCCATAGACCACCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCA 12218437
Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101
|| || ||| ||||||||| || || ||||| || | ||
Sbjct 12218436 CAGTAGGAGT--------------------AGCAGGAGTAGAAACTGCAGCGGTTAAAAA 12218397
Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161
||| || || || | ||| ||| || | || ||||| ||||| || || || ||
Sbjct 12218396 ATTGCAACCTTCTAAATAGGAACTGGCCAATCCATGAGTATACCATGAAGTTACAAAGGT 12218337
Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221
||| || |||| |||||| || | || | || ||| ||| || || | ||||| ||
Sbjct 12218336 TGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGACCAGA 12218277
Query 7222 CCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275
|||||| ||||||||||| | || | | | ||||||||| | | ||||||
Sbjct 12218276 CCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 12218223
Score = 125 bits (138), Expect = 9e-24
Identities = 176/246 (72%), Gaps = 6/246 (2%)
Strand=Plus/Minus
Query 8278 CCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGAT 8337
|||||| || || || || | ||||||||| ||||| ||||| || ||||| || ||
Sbjct 8835271 CCAGATCGGGTAAAAATGCAAACCAATAGCTGCAGAAGTAGGAATAATGGCACCGGAAAT 8835212
Query 8338 GATGTTGTTGCCATACATGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCAC 8397
|| ||||| || || | || || |||| || |||||||| || || ||||| || ||
Sbjct 8835211 AATATTGTTTCCGTAAAGAAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTAC 8835152
Query 8398 AGGAGGAGCAGCGACGAAAGCGACGATGAAACAAATAGCAGCAGCG---AGCAGCGTAGG 8454
||||||||||| | ||| | |||| | | ||| | || ||| | | |||||
Sbjct 8835151 TGGAGGAGCAGCAATGAATG---CGATAACAAAAACGGAAGTTGCGGTCAATAAGGTAGG 8835095
Query 8455 AATCATCAGGACACCGAACCAACCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTT 8514
||||||| ||||| ||||| || | || ||||| || | ||| ||||| ||||||
Sbjct 8835094 GATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTT 8835035
Query 8515 ACAGAA 8520
||||||
Sbjct 8835034 ACAGAA 8835029
Score = 84.2 bits (92), Expect = 3e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 10249 GTGGGATAAGAAACACAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAAC 10308
|| ||||||| | |||| || |||| || || | | ||||| ||||||||||||||
Sbjct 2824400 GTAGGATAAGCAGCACAAGTGAGAACAAACCCTTGACCAATCTGCTCATCATCAAGGAAA 2824459
Query 10309 GATTGATCGCTTTGATCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCA 10368
|| || ||||| || | || || | | ||| || ||||| || ||||| | |
Sbjct 2824460 CTCTGGTCAGACTGATCAACAGATCCAGACACAACTTTACCAGCACAGCTTGAACAAGAA 2824519
Query 10369 CCAGCTCGGCACGAGTAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTAC 10428
||||| ||||| ||||| | || || || ||||| || || || || |||| |||
Sbjct 2824520 CCAGCACGGCAAGAGTATGGCAAATCGATTCCAGCTTCCTCGGCCGCGTCAAGAACGTAA 2824579
Query 10429 TGATCGTCAGCACACTCAA 10447
||||| |||||||||
Sbjct 2824580 ACGTCGTCGTCACACTCAA 2824598
>seq74
Length=21493
Score = 253 bits (280), Expect = 3e-62
Identities = 257/336 (76%), Gaps = 9/336 (3%)
Strand=Plus/Plus
Query 7528 CTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCAT 7587
|||| ||||||| ||||| ||||||||||||||||||||||| || ||||| ||||||||
Sbjct 10677 CTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCAT 10736
Query 7588 GCCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATC 7647
|||| || |||||| | | || ||||| || || | ||||| ||||||| |||
Sbjct 10737 ACCAAAGTTAGTACGGTTAATAATATCAGCCCAAGTATTAATAACACGCCCTTGACTATC 10796
Query 7648 AATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAG 7707
|| | || |||||||| |||||||| || |||||||| ||||| ||||||| ||| |
Sbjct 10797 AACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAA 10856
Query 7708 AGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGA 7767
|||||| ||||| || || || || ||||| || || | |||||| || | ||||| ||
Sbjct 10857 AGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAGA 10916
Query 7768 GTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGAT 7827
||||||| | ||||||||| || ||||| || || |||||||| || ||
Sbjct 10917 ATTGTTGA---------AACGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAAT 10967
Query 7828 GTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACC 7863
|||||| || | ||||||||||||||| | |||||
Sbjct 10968 GTTGTAAGTTTATTCTTCTTGACCGAATCTGTAACC 11003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622119387514240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |