Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq696 526 3e-144
seq2 385 6e-102
seq74 201 1e-46
seq7 125 8e-24
seq4 116 4e-21
>seq696
Length=154923
Score = 526 bits (582), Expect = 3e-144
Identities = 718/1000 (72%), Gaps = 2/1000 (0%)
Strand=Plus/Minus
Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879
||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| |
Sbjct 1370 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1311
Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939
|||||||| || | || ||| | | || || | ||||||||||| || |||
Sbjct 1310 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCT 1251
Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACAA 171998
|| || ||||| || || || | ||||| ||| | || ||| ||||| || || |||||
Sbjct 1250 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACAA 1192
Query 171999 CATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTAT 172058
|| || || ||||| || |||| | || || || ||| | || || ||||| ||
Sbjct 1191 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 1132
Query 172059 CTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAAT 172118
||||||||| ||| |||| ||||||||| | ||||| |||||||||||| | | | |
Sbjct 1131 CTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGT 1072
Query 172119 CTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAG 172178
| ||||| | | ||| | | || ||||| | |||||||||| | | |
Sbjct 1071 TCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1012
Query 172179 ATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGC 172238
| |||||| | || ||||| || ||||||||||| ||||| |||| || |||
Sbjct 1011 TCTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 952
Query 172239 TGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 172298
||| ||| | | |||||| | |||||||| || |||||||||||||| ||||| ||
Sbjct 951 TGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 892
Query 172299 CTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCC 172358
||| ||||| |||||||||||| | || ||||| || ||||| |||||||| ||||| ||
Sbjct 891 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCC 832
Query 172359 TTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGG 172418
|| |||||| ||| ||||| || | || || || || | || || ||||| ||
Sbjct 831 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGG 772
Query 172419 TTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGG 172478
||| || || || ||| | | ||||| || || || ||| ||||| || | ||
Sbjct 771 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 712
Query 172479 ATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGG 172538
|||| ||||| |||||||||||||| |||||||| ||||| || |||||||| |||||
Sbjct 711 TTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 652
Query 172539 TCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 172598
|| | |||||||| |||||| ||||||||| || | | | || |||||| ||||
Sbjct 651 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 592
Query 172599 AGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 172658
| || || || ||| || | ||||| || || | ||||| |||| ||||| |||||
Sbjct 591 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 532
Query 172659 CCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTAC 172718
||| || |||||||| |||||||||||||| || ||| | | || || || |||
Sbjct 531 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATAC 472
Query 172719 ATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGC 172778
|||| ||| || ||||| | || ||||| ||||||||||||||||||||| | |||||
Sbjct 471 TTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 412
Query 172779 ACACAACTTCCCATTAGACCTTGCTTCTGCAGAGTCTTCA 172818
||||||||||| ||||||| ||| ||| ||| || ||
Sbjct 411 TCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 372
Score = 381 bits (422), Expect = 7e-101
Identities = 705/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Plus
Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010
|||||| || | || ||||||||| ||| || || ||||| || | || |||||||||
Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777
Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070
|| || || | |||||||| || | || | || ||||||||| ||| || |||||
Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837
Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130
|| || ||||||||||| ||||| | || ||| ||| | ||||| || ||||||
Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897
Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190
|| || ||||| || || |||| | | | ||| | | |||| || |||||
Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32957
Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250
|||||||||||||| || ||||||| ||| | || || |||||| |||||
Sbjct 32958 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 33017
Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310
|| | || || | || | | | |||||||| ||| | ||||| ||||| | || ||
Sbjct 33018 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 33077
Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370
||| | ||||||| || ||| |||||||||||| | || || || || |
Sbjct 33078 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 33137
Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430
|||| |||| || |||||||| || |||||||||| || ||| || |||
Sbjct 33138 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 33197
Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490
|| || || || ||||| | ||| | || | ||||| || || || ||||||||
Sbjct 33198 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 33257
Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550
|||||||| |||||||| || || || |||| || | || | ||||| || ||||||
Sbjct 33258 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 33317
Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610
||||| || || | || || || | ||||| || ||| |||
Sbjct 33318 GGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT------ 33359
Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670
| | || ||| | || ||| | || || || | |||||||||||| ||| |
Sbjct 33360 ---GCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 33416
Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730
|| || ||| | || |||||||| || ||||| | || ||||| || ||| | | |||
Sbjct 33417 ACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 33476
Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790
|| ||| | ||||| || ||||| || | ||| | |||| | | || | ||
Sbjct 33477 CATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 33536
Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850
||||| || | ||||| | || || ||||| || || || || || | ||||| |||
Sbjct 33537 GGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 33596
Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910
|||||||| || ||||||||||| ||||| ||||| ||| | || |||||||| | ||
Sbjct 33597 GATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 33656
Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970
|||||| | || |||||| || ||||| ||| | |||| || || || || |||||
Sbjct 33657 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 33716
Query 173971 AGAGGTAACGCACTTTAA 173988
| || ||||| ||||||
Sbjct 33717 CGTGGAAACGCTCTTTAA 33734
>seq2
Length=19320864
Score = 385 bits (426), Expect = 6e-102
Identities = 706/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Plus
Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010
|||||| || | || ||||||||| ||| || || ||||| || | || |||||||||
Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854
Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070
|| || || | |||||||| || | || | || ||||||||| ||| || |||||
Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914
Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130
|| || ||||||||||| ||||| | || ||| ||| | ||||| || ||||||
Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974
Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190
|| || ||||| || || |||| | | | ||| | | |||| || |||||
Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 9135034
Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250
|||||||||||||| || ||||||| ||| | || || |||||| |||||
Sbjct 9135035 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 9135094
Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310
|| | || || | || | | | |||||||| ||| | ||||| ||||| | || ||
Sbjct 9135095 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 9135154
Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370
||| | ||||||| || ||| |||||||||||| | || || || || |
Sbjct 9135155 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 9135214
Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430
|||| |||| || |||||||| || |||||||||| || ||| || |||
Sbjct 9135215 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 9135274
Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490
|| || || || ||||| | ||| | || | ||||| || || || ||||||||
Sbjct 9135275 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 9135334
Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550
|||||||| |||||||| || || || |||| || | || | ||||| || ||||||
Sbjct 9135335 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 9135394
Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610
||||| || || | || || || | ||||| || ||| |||
Sbjct 9135395 GGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT------ 9135436
Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670
| | || ||| | || ||| | || || || | |||||||||||| ||| |
Sbjct 9135437 ---GCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 9135493
Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730
|| || ||||| || |||||||| || ||||| | || ||||| || ||| | | |||
Sbjct 9135494 ACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 9135553
Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790
|| ||| | ||||| || ||||| || | ||| | |||| | | || | ||
Sbjct 9135554 CATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 9135613
Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850
||||| || | ||||| | || || ||||| || || || || || | ||||| |||
Sbjct 9135614 GGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 9135673
Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910
|||||||| || ||||||||||| ||||| ||||| ||| | || |||||||| | ||
Sbjct 9135674 GATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 9135733
Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970
|||||| | || |||||| || ||||| ||| | |||| || || || || |||||
Sbjct 9135734 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 9135793
Query 173971 AGAGGTAACGCACTTTAA 173988
| || ||||| ||||||
Sbjct 9135794 CGTGGAAACGCTCTTTAA 9135811
Score = 381 bits (422), Expect = 7e-101
Identities = 705/1038 (68%), Gaps = 21/1038 (2%)
Strand=Plus/Minus
Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010
|||||| || | || ||||||||| ||| || || ||||| || | || |||||||||
Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625
Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070
|| || || | |||||||| || | || | || ||||||||| ||| || |||||
Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565
Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130
|| || ||||||||||| ||||| | || ||| ||| | ||||| || ||||||
Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505
Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190
|| || ||||| || || |||| | | | ||| | | |||| || |||||
Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 8803445
Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250
|||||||||||||| || ||||||| ||| | || || |||||| |||||
Sbjct 8803444 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 8803385
Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310
|| | || || | || | | | |||||||| ||| | ||||| ||||| | || ||
Sbjct 8803384 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 8803325
Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370
||| | ||||||| || ||| |||||||||||| | || || || || |
Sbjct 8803324 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 8803265
Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430
|||| |||| || |||||||| || |||||||||| || ||| || |||
Sbjct 8803264 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 8803205
Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490
|| || || || ||||| | ||| | || | ||||| || || || ||||||||
Sbjct 8803204 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 8803145
Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550
|||||||| |||||||| || || || |||| || | || | ||||| || ||||||
Sbjct 8803144 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 8803085
Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610
||||| || || | || || || | ||||| || ||| |||
Sbjct 8803084 GGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT------ 8803043
Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670
| | || ||| | || ||| | || || || | |||||||||||| ||| |
Sbjct 8803042 ---GCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 8802986
Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730
|| || ||| | || |||||||| || ||||| | || ||||| || ||| | | |||
Sbjct 8802985 ACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 8802926
Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790
|| ||| | ||||| || ||||| || | ||| | |||| | | || | ||
Sbjct 8802925 CATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 8802866
Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850
||||| || | ||||| | || || ||||| || || || || || | ||||| |||
Sbjct 8802865 GGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 8802806
Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910
|||||||| || ||||||||||| ||||| ||||| ||| | || |||||||| | ||
Sbjct 8802805 GATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 8802746
Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970
|||||| | || |||||| || ||||| ||| | |||| || || || || |||||
Sbjct 8802745 TGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 8802686
Query 173971 AGAGGTAACGCACTTTAA 173988
| || ||||| ||||||
Sbjct 8802685 CGTGGAAACGCTCTTTAA 8802668
Score = 354 bits (392), Expect = 1e-92
Identities = 696/1038 (67%), Gaps = 41/1038 (4%)
Strand=Plus/Plus
Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010
|||||| || | || ||||||||| ||| || || ||||| || | || |||||||||
Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282
Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070
|| || || | |||||||| || | || | || ||||||||| ||| || |||||
Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342
Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130
|| || ||||||||||| ||||| | || ||| ||| | ||||| || ||||||
Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402
Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190
|| || ||||| || || |||| || || | || |||||
Sbjct 12218403 ACCGCTGCAGTTTCTACTCCTG--------------------CTACTCCTACTGTGGGGT 12218442
Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250
|||||||||||||| || ||||||| ||| | || || |||||| |||||
Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502
Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310
|| | || || | || | | | |||||||| ||| | ||||| ||||| | || ||
Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562
Query 173311 CTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACT 173370
||| | |||| || || ||| |||||||||||| | || || || || |
Sbjct 12218563 TCTGTTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 12218622
Query 173371 AGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGT 173430
|||| |||| || |||||||| || |||||||||| || ||| || |||
Sbjct 12218623 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 12218682
Query 173431 GTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAAT 173490
|| || || || ||||| | ||| | || | ||||| || || || ||||||||
Sbjct 12218683 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 12218742
Query 173491 CCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCAT 173550
|||||||| |||||||| || || || |||| || | || | ||||| || ||||||
Sbjct 12218743 CCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCAT 12218802
Query 173551 GGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATT 173610
| ||| || || | || || || | |||||| | ||| ||| | |
Sbjct 12218803 GTTGCTACTGTAGAAAATACTTTATTTGAAGA------------TGGTGATGGTGCAAAT 12218850
Query 173611 CAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 173670
|| ||| | || ||| | || || || | |||||||||||| ||| |
Sbjct 12218851 ---------ACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTC 12218901
Query 173671 ACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTA 173730
|| || ||| | || |||||||| || ||||| | || ||||| || ||| | | |||
Sbjct 12218902 ACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTA 12218961
Query 173731 CACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTA 173790
|| ||| | ||||| || ||||| || | ||| | |||| | | || | ||
Sbjct 12218962 CATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTC 12219021
Query 173791 GGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 173850
||||| || | ||||| | || || |||||||| || | || || | ||||| |||
Sbjct 12219022 GGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAA 12219081
Query 173851 GATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCA 173910
|||||||| || ||||||||||| ||||| ||||| ||| | || |||||||| | ||
Sbjct 12219082 GATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 12219141
Query 173911 TGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCA 173970
|||||| | || |||||| || ||||| ||| | |||| || || || || |||||
Sbjct 12219142 TGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCA 12219201
Query 173971 AGAGGTAACGCACTTTAA 173988
| || ||||| ||||||
Sbjct 12219202 CGTGGAAACGCTCTTTAA 12219219
Score = 82.4 bits (90), Expect = 9e-11
Identities = 166/244 (68%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879
||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| |
Sbjct 8835029 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 8835088
Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939
|||||||| || | || ||| | | || | | ||||||||||| || |||
Sbjct 8835089 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTGTTATCGCATTCATTGCTGCTCCT 8835148
Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT-TTCTTATATGGTAACAA 171998
|| || ||||| || || || | ||||| ||| | || ||| ||||| || || |||||
Sbjct 8835149 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTT-TACGGAAACAA 8835207
Query 171999 CATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTAT 172058
|| || || ||||| || |||| | || || || ||| | || || ||||| ||
Sbjct 8835208 TATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGAT 8835267
Query 172059 CTGG 172062
||||
Sbjct 8835268 CTGG 8835271
>seq74
Length=21493
Score = 201 bits (222), Expect = 1e-46
Identities = 249/342 (73%), Gaps = 9/342 (3%)
Strand=Plus/Minus
Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTT 172536
|| |||| ||||| ||||||||| |||| |||||||| ||||| || || ||||| |||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 172537 GGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTA 172596
|| || | ||||||| ||||||||| || | | | || |||||| ||
Sbjct 10943 GGCCGATTGATCTTCCG---------TTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 172597 GCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTC 172656
|| | || || || ||| || | ||||| || || | ||||| | || ||||| |||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 172657 AACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCT 172716
||||| || |||||||| |||||||||||||| || ||| | | || || || |
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 172717 ACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAAT 172776
|| |||| ||| || ||||| | | ||| | ||||||||||||||||||||| | |||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 172777 GCACACAACTTCCCATTAGACCTTGCTTCTGCAGAGTCTTCA 172818
|| ||||||||||| ||||||| ||| ||| ||| || ||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 10671
>seq7
Length=24649197
Score = 125 bits (138), Expect = 8e-24
Identities = 153/207 (74%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|||||||||||| |||| ||||| || ||||| ||||||||||| ||||| || || ||
Sbjct 3494607 CAAAGGTTTGGTGTTCCGATGGGTTATGGAGGCCCTCATGCTGCGTTCTTGGCTACTTCA 3494666
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGCGAAG 158560
| |||||||||||| ||| ||||| || ||| | || | ||| || ||| ||
Sbjct 3494667 CAAGAGTATAAGAGAATGATGCCTGGGAGGATTATTGGTATTAGT--GTTGATTCTTCAG 3494724
Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620
| || |||| | | || | ||||||||||| |||||||| || || |||||||
Sbjct 3494725 GAAAGCAAGCTCTGCGTATGGCTATGCAGACTAGAGAACAGCATATTAGGAGGGACAAAG 3494784
Query 158621 CAACCAGTAACATCTGCACAGCACAAG 158647
| || || |||||||| || || ||||
Sbjct 3494785 CCACTAGCAACATCTGTACTGCTCAAG 3494811
Score = 95.1 bits (104), Expect = 1e-14
Identities = 120/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998
|||||||| ||||||||| |||||||| |||||||||||||| |||||||| |
Sbjct 3494106 GAGAATCCAGCTTGGTACACTCAATACACTCCTTATCAAGCTGAGATCTCTCAGGGTCGT 3494165
Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058
| ||| | | |||||| ||| ||| | ||||| || ||||| || || || || |
Sbjct 3494166 CTCGAATCGCTGCTCAATTTCCAGACGGTGATCACCGATCTCACCGGGCTTCCTATGTCG 3494225
Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
|| || || || | ||||||| || || || || || ||||||
Sbjct 3494226 AATGCTTCGCTTCTGGATGAAGGGACCGCTGCTGCGGAGGCAATG 3494270
Score = 89.7 bits (98), Expect = 6e-13
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752
||| || ||||| || ||||| || | || ||||| ||||||||||| |||||||||||
Sbjct 3496563 TGGAGCGGATGTGTGCCATCTCAATCTCCACAAGACCTTCTGTATTCCTCATGGAGGTGG 3496622
Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTT 159801
|||||||| | ||||| |||||||| || ||| | ||||||||
Sbjct 3496623 TGGTCCTGGTATGGGTCCCATTGGTGTGAAGAATCATTTGGCACCATTT 3496671
>seq4
Length=23328337
Score = 116 bits (128), Expect = 4e-21
Identities = 150/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|| ||||||||| |||| ||||| || || |||||||||||||| ||||| || || ||
Sbjct 5644340 CAGAGGTTTGGTGTTCCCATGGGTTATGGTGGTCCTCATGCTGCTTTCTTGGCTACTTCA 5644281
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG--GTCAGTCAGTAGATAGCGAAG 158560
| |||||||||||| ||| ||||| |||||| | | || ||| || ||| |
Sbjct 5644280 CAAGAGTATAAGAGAATGATGCCTGGGAGAATTATTGGTGTTAGT--GTTGATTCTTCCG 5644223
Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620
| || |||| | | | || | |||||||| || ||||||||| | || || ||||
Sbjct 5644222 GGAAGCAAGCTTTGCGTATGGCTATGCAGACTAGGGAACAGCATATCCGCAGGGATAAAG 5644163
Query 158621 CAACCAGTAACATCTGCACAGCACA 158645
| ||||| |||||||| || || ||
Sbjct 5644162 CTACCAGCAACATCTGTACCGCTCA 5644138
Score = 113 bits (124), Expect = 5e-20
Identities = 155/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 157891 GGATACTATGGAACCATCAC--ACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTA 157948
||||||||| ||| ||| ||| || || || ||| || || | |||||||||
Sbjct 5644889 GGATACTAT--AACACTCATGTACCTCCTGTGATTTTGCGTAATATTATGGAGAATCCTG 5644832
Query 157949 GTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTT 158008
|||||| || || ||||| |||||||||||||| ||||| ||||| | ||| |||
Sbjct 5644831 CTTGGTATACTCAATATACTCCTTATCAAGCTGAGATTTCTCAAGGAAGGCTTGAATCTT 5644772
Query 158009 TATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTC 158068
| |||||||||| ||| | || || || ||||| || ||||||| | ||||| ||
Sbjct 5644771 TGCTCAATTACCAGACGGTTATTACTGATCTCACCGGTTTACCGATGTCGAACGCTTCGT 5644712
Query 158069 TATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
| | ||||||| || || || || ||||| |||
Sbjct 5644711 TGCTTGATGAAGGTACGGCGGCTGCGGAAGCGATG 5644677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588046083954560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |