Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq696 565 3e-156 seq2 511 5e-140 seq74 217 2e-51 >seq696 Length=154923 Score = 565 bits (626), Expect = 3e-156 Identities = 704/962 (73%), Gaps = 2/962 (0%) Strand=Plus/Minus Query 162412 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 162471 ||||| || || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284 Query 162472 ATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAA 162531 | ||| || |||| ||| | |||||||| || || || || || || || |||||| Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224 Query 162532 CCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCT 162591 || || |||| || || | || || ||||| || || || ||||| || |||| || Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164 Query 162592 TCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGG 162651 || || |||||| | || || || || ||||||||||| ||||| ||||||| ||| Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104 Query 162652 CTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATCTATGCC 162711 || || ||||||||||||| |||| | || | ||||| | | || | | Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044 Query 162712 TACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGCG-T 162770 || ||||| ||||| |||||||| || |||||| ||||||||||| ||||| |||| | Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCGGT 985 Query 162771 AGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCA 162830 ||||| || || ||||||||||| || | || || ||| || ||||||| | ||||| Sbjct 984 TGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCA 925 Query 162831 AGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTGT 162890 || ||| ||||| | ||||| | || ||| |||||| ||||||| ||| |||| Sbjct 924 GGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGT 865 Query 162891 CTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 162950 ||||| || |||||||||||||| ||||| || || |||||||| ||||| || ||||| Sbjct 864 ATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 805 Query 162951 CTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCG 163010 ||||| || || || || ||||| ||||| ||||| ||||| || ||| | || | Sbjct 804 ATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 745 Query 163011 TGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 163070 || || || |||| ||| || || | ||||||| ||||| ||||||||||| || Sbjct 744 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAAC 685 Query 163071 ATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATT 163130 |||||||| || || || || ||||| || || || ||||||||||||||||| || Sbjct 684 TTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 625 Query 163131 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTT 163190 |||||| || ||||| || || |||||| | || || ||||| || || || || ||||| Sbjct 624 CAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTT 565 Query 163191 CACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 163250 || || | || | || ||||| |||||||| || |||||||| |||||||| || Sbjct 564 TACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATC 505 Query 163251 CATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAGG 163310 | ||||| |||| || ||||| | || || ||||| || || | |||||||| Sbjct 504 AGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAA 445 Query 163311 TTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGCAGC 163370 | ||||||||||||||||| || || ||||||||||||||||| || ||||| || || Sbjct 444 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 385 Query 163371 TG 163372 || Sbjct 384 TG 383 Score = 511 bits (566), Expect = 5e-140 Identities = 731/1022 (72%), Gaps = 8/1022 (1%) Strand=Plus/Plus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || || ||||| ||| | ||||||||||| Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || | || |||| ||| ||| | || | || || ||| | || |||||||| || Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAATTTTCTC 163800 || || || ||||| || |||||| |||| | ||||||| | || ||| |||||| | Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897 Query 163801 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 163859 || || || || || || |||||| | | | | |||||| || || || || ||||| Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 32956 Query 163860 TCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGT 163919 |||||| || || || ||||| || ||| ||| | || || || ||| |||||| Sbjct 32957 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGT 33016 Query 163920 GGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCG 163979 || |||||||| || || || | || ||||| ||| | || ||||||||||||||||| Sbjct 33017 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 33076 Query 163980 -CCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCG 164038 ||| || | | |||| || ||||| || || ||||||||||| |||||||| || | Sbjct 33077 ATCTG-TTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTG 33135 Query 164039 TTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTG 164098 || |||||| || || || || || |||||||| |||||||||| || || ||||| Sbjct 33136 TTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTG 33195 Query 164099 GAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGA 164158 | || || || || || ||||| || | || | ||||| |||||||| ||||| |||| Sbjct 33196 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 33255 Query 164159 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTC 164218 |||| || |||||||||||||| || ||| |||| |||| || |||||| ||||||| Sbjct 33256 ACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTC 33315 Query 164219 ACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGG 164278 | || | || || |||||||| || | ||||||||| || ||||| || || | Sbjct 33316 ATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 33375 Query 164279 CGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 164338 | ||| | | || || | ||||| |||||||| |||||||| || |||||||| |||| Sbjct 33376 CTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 33435 Query 164339 CGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 164398 | || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| |||| Sbjct 33436 CACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 33495 Query 164399 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTC 164458 | || || | ||| |||||| || |||| | | || || ||| | || || | Sbjct 33496 TACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTAC 33555 Query 164459 GTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTT 164518 |||| || || || || || || || | ||||| |||||||| || || ||||||| Sbjct 33556 GTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTT 33615 Query 164519 TCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACC 164578 ||||||| || || || | || |||||||| | ||||| ||| | || | || | Sbjct 33616 TCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 33675 Query 164579 AGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTA 164636 ||| || || ||| || | ||||| || || || || || | || || || ||||| Sbjct 33676 AGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTA 33733 Query 164637 AT 164638 || Sbjct 33734 AT 33735 >seq2 Length=19320864 Score = 511 bits (566), Expect = 5e-140 Identities = 731/1022 (72%), Gaps = 8/1022 (1%) Strand=Plus/Minus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || || ||||| ||| | ||||||||||| Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || | || |||| ||| ||| | || | || || ||| | || |||||||| || Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAATTTTCTC 163800 || || || ||||| || |||||| |||| | ||||||| | || ||| |||||| | Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505 Query 163801 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 163859 || || || || || || |||||| | | | | |||||| || || || || ||||| Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 8803446 Query 163860 TCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGT 163919 |||||| || || || ||||| || ||| ||| | || || || ||| |||||| Sbjct 8803445 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGT 8803386 Query 163920 GGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCG 163979 || |||||||| || || || | || ||||| ||| | || ||||||||||||||||| Sbjct 8803385 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 8803326 Query 163980 C-CTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCG 164038 ||| || | | |||| || ||||| || || ||||||||||| |||||||| || | Sbjct 8803325 ATCTG-TTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTG 8803267 Query 164039 TTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTG 164098 || |||||| || || || || || |||||||| |||||||||| || || ||||| Sbjct 8803266 TTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTG 8803207 Query 164099 GAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGA 164158 | || || || || || ||||| || | || | ||||| |||||||| ||||| |||| Sbjct 8803206 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 8803147 Query 164159 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTC 164218 |||| || |||||||||||||| || ||| |||| |||| || |||||| ||||||| Sbjct 8803146 ACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTC 8803087 Query 164219 ACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGG 164278 | || | || || |||||||| || | ||||||||| || ||||| || || | Sbjct 8803086 ATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 8803027 Query 164279 CGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 164338 | ||| | | || || | ||||| |||||||| |||||||| || |||||||| |||| Sbjct 8803026 CTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 8802967 Query 164339 CGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 164398 | || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| |||| Sbjct 8802966 CACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 8802907 Query 164399 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTC 164458 | || || | ||| |||||| || |||| | | || || ||| | || || | Sbjct 8802906 TACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTAC 8802847 Query 164459 GTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTT 164518 |||| || || || || || || || | ||||| |||||||| || || ||||||| Sbjct 8802846 GTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTT 8802787 Query 164519 TCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACC 164578 ||||||| || || || | || |||||||| | ||||| ||| | || | || | Sbjct 8802786 TCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 8802727 Query 164579 AGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTA 164636 ||| || || ||| || | ||||| || || || || || | || || || ||||| Sbjct 8802726 AGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTA 8802669 Query 164637 AT 164638 || Sbjct 8802668 AT 8802667 Score = 508 bits (562), Expect = 7e-139 Identities = 730/1022 (71%), Gaps = 8/1022 (1%) Strand=Plus/Plus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || || ||||| ||| | ||||||||||| Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || | || |||| ||| ||| | || | || || ||| | || |||||||| || Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAATTTTCTC 163800 || || || ||||| || |||||| |||| | ||||||| | || ||| |||||| | Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974 Query 163801 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 163859 || || || || || || |||||| | | | | |||||| || || || || ||||| Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCT-TTGTTGTTACTGTGGGG 9135033 Query 163860 TCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGT 163919 |||||| || || || ||||| || ||| ||| | || || || ||| |||||| Sbjct 9135034 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGT 9135093 Query 163920 GGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCG 163979 || |||||||| || || || | || ||||| ||| | || ||||||||||||||||| Sbjct 9135094 TGCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 9135153 Query 163980 -CCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCG 164038 ||| || | | |||| || ||||| || || ||||||||||| |||||||| || | Sbjct 9135154 ATCTG-TTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTG 9135212 Query 164039 TTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTG 164098 || |||||| || || || || || |||||||| |||||||||| || || ||||| Sbjct 9135213 TTTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTG 9135272 Query 164099 GAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGA 164158 | || || || || || ||||| || | || | ||||| |||||||| ||||| |||| Sbjct 9135273 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 9135332 Query 164159 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTC 164218 |||| || |||||||||||||| || ||| |||| |||| || |||||| ||||||| Sbjct 9135333 ACCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTC 9135392 Query 164219 ACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGG 164278 | || | || || |||||||| || | ||||||||| || ||||| || || | Sbjct 9135393 ATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 9135452 Query 164279 CGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 164338 | ||| | | || || | ||||| |||||||| |||||||| || ||| |||| |||| Sbjct 9135453 CTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGT 9135512 Query 164339 CGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 164398 | || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| |||| Sbjct 9135513 CACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 9135572 Query 164399 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTC 164458 | || || | ||| |||||| || |||| | | || || ||| | || || | Sbjct 9135573 TACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTAC 9135632 Query 164459 GTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTT 164518 |||| || || || || || || || | ||||| |||||||| || || ||||||| Sbjct 9135633 GTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTT 9135692 Query 164519 TCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACC 164578 ||||||| || || || | || |||||||| | ||||| ||| | || | || | Sbjct 9135693 TCTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 9135752 Query 164579 AGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTA 164636 ||| || || ||| || | ||||| || || || || || | || || || ||||| Sbjct 9135753 AGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTA 9135810 Query 164637 AT 164638 || Sbjct 9135811 AT 9135812 Score = 471 bits (522), Expect = 5e-128 Identities = 669/943 (71%), Gaps = 22/943 (2%) Strand=Plus/Plus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTGGA 163680 |||||| | ||||||||||| | | | || || ||||| ||| | ||||||||||| Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282 Query 163681 TTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTTC 163740 || | || |||| ||| ||| | || | || || ||| | || |||||||| || Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342 Query 163741 GTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAATTTTCTC 163800 || || || ||||| || |||||| |||| | ||||||| | || ||| |||||| | Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402 Query 163801 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGGT 163860 || || || || || || |||||| || || || |||||| Sbjct 12218403 ACCGCTGCAGTTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGT 12218442 Query 163861 CCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGTG 163920 ||||| || || || ||||| || ||| ||| | || || || ||| |||||| Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502 Query 163921 GCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCG- 163979 || |||||||| || || || | || ||||| ||| | || ||||||||||||||||| Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562 Query 163980 CCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCGT 164039 ||| || | | |||| || ||||| || || ||||||||||| |||||||| || || Sbjct 12218563 TCTG-TTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 12218621 Query 164040 TAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTGG 164099 | |||||| || || || || || |||||||| |||||||||| || || |||||| Sbjct 12218622 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 12218681 Query 164100 AGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGAA 164159 || || || || || ||||| || | || | ||||| |||||||| ||||| ||||| Sbjct 12218682 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 12218741 Query 164160 CCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTCA 164219 ||| || |||||||||||||| || ||| |||| |||| || |||||| |||||||| Sbjct 12218742 CCCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCA 12218801 Query 164220 CGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGC 164279 | | || || |||||||| || | ||||||||| || ||||| || || || Sbjct 12218802 TGTTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 12218861 Query 164280 GTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTC 164339 ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||||| Sbjct 12218862 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 12218921 Query 164340 GCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGT 164399 || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| ||||| Sbjct 12218922 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 12218981 Query 164400 GCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCG 164459 || || | ||| |||||| || |||| | | || || ||| | || || || Sbjct 12218982 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 12219041 Query 164460 TGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTT 164519 ||| || || ||||| | || || | ||||| |||||||| || || |||||||| Sbjct 12219042 TGCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTT 12219101 Query 164520 CTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGG 164562 |||||| || || || | || |||||||| | ||||| ||| Sbjct 12219102 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGG 12219144 >seq74 Length=21493 Score = 217 bits (240), Expect = 2e-51 Identities = 246/331 (74%), Gaps = 9/331 (3%) Strand=Plus/Minus Query 163042 GGTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTC 163101 ||||||| ||||||||||||||| | || |||||||| || || || |||||||| || Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944 Query 163102 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 163161 || || |||||||||| | ||||||| || ||||| || || |||||| | Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893 Query 163162 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTC 163221 || || ||||| || || || || ||||| || || | || | || ||||| ||| Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833 Query 163222 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 163281 ||||| || |||||||| |||||||| || | ||||| |||| || ||||| | || Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773 Query 163282 ACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAAT 163341 || ||||| || || | |||||| | || ||||||||||||||||| || || ||| Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713 Query 163342 GCTCACAACTTCCCACTTGACCTGGCAGCTG 163372 |||||||||||||| || ||||| || |||| Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTG 10682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557579149019200