Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq696 610 7e-170
seq2 610 7e-170
seq74 170 2e-37
>seq696
Length=154923
Score = 610 bits (676), Expect = 7e-170
Identities = 738/1002 (74%), Gaps = 2/1002 (0%)
Strand=Plus/Plus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| || ||||||||||| ||||||||||| || | || |||
Sbjct 32730 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 32789
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||| ||| | ||| | || |||||| | || || || | || || || |||
Sbjct 32790 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 32849
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674
|||||||| || ||||| ||||||||| | || || || ||| | || || ||||||
Sbjct 32850 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 32909
Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734
|||||| || || | | | |||||| | || | || ||||||||||| ||||||
Sbjct 32910 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 32969
Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794
|| ||||| | ||||||||| | || || || ||||||||||| || ||||||||
Sbjct 32970 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 33029
Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853
|||||||| |||| ||||| ||| | ||||| |||||||| || || ||| || | |
Sbjct 33030 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 33088
Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913
|| || || ||||| || || ||||||||||| || |||||||||||| ||||| ||
Sbjct 33089 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 33148
Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973
|| || || || |||||||| ||||||| || || || ||| || || | || ||
Sbjct 33149 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 33208
Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033
|| |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||||||
Sbjct 33209 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 33268
Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093
|||||| || || ||| | |||| | || |||| | || |||||||||| ||| ||
Sbjct 33269 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 33328
Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153
||| |||||| | | | |||||||||| |||||||| ||| || ||| || ||
Sbjct 33329 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 33388
Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213
||| | || || || ||||||||||| || || ||||| || ||||| || ||||||||
Sbjct 33389 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 33448
Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273
|||| || ||||| | ||||| |||||||||||| | ||||| || || | ||
Sbjct 33449 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 33508
Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333
| | |||| ||| | | || | | ||||| ||| | ||||| ||||| ||||||||
Sbjct 33509 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 33568
Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393
|||||||| || ||| | ||||| ||||||||||| |||||||| ||||| || || ||
Sbjct 33569 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 33628
Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453
|| || || ||||||||| ||||||| ||| | || || ||||| |||||||| ||
Sbjct 33629 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 33688
Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
| || | ||||||||||| || || || || || || || ||
Sbjct 33689 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 33730
Score = 596 bits (660), Expect = 2e-165
Identities = 717/984 (73%), Gaps = 0/984 (0%)
Strand=Plus/Minus
Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156
||| | ||||||||| | |||||||| || | || ||||| || ||| |||||||||||
Sbjct 1361 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1302
Query 167157 ACGTTGCTTGCAGCAACCATCTGTTTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGAC 167216
|| || | | ||||| | ||| || ||||| ||| | | ||||||||| || ||
Sbjct 1301 ACCTTATTGACCGCAACTTCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGAT 1242
Query 167217 ATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 167276
|| |||||||| || ||||| ||| |||| || || | || || ||||| || || ||
Sbjct 1241 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCC 1182
Query 167277 GGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGCA 167336
||||| || ||||| ||||| ||||||||| | || || || || |||||||||||
Sbjct 1181 GGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCT 1122
Query 167337 GCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTC 167396
||| || | || || ||| | ||||| |||||||||| |||| | ||| | |||||
Sbjct 1121 GCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTT 1062
Query 167397 CTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATG 167456
| |||| | | ||||||||||||||||||||||| || |||||| ||||||
Sbjct 1061 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 1002
Query 167457 CGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTC 167516
||||| ||||| |||||||| || ||||| || || || || ||||||| ||| |
Sbjct 1001 CGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTG 942
Query 167517 GTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACA 167576
||||||| | ||||| || ||| ||||| | |||||||| || |||||||||||
Sbjct 941 ATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACT 882
Query 167577 TTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATG 167636
||||||| ||| |||| ||||| || ||||||||||| || |||||||| || || |||
Sbjct 881 TTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATG 822
Query 167637 CTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTT 167696
| || || ||||| ||||||||||| || || || ||||| ||||| ||||| ||||
Sbjct 821 TTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTA 762
Query 167697 ACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTC 167756
|| ||| || | | |||||||| |||| ||| || || | ||||||| |||
Sbjct 761 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 702
Query 167757 GGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATC 167816
|| || |||||||| || || ||||| || |||||||| ||||| || || || |||||
Sbjct 701 GGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATC 642
Query 167817 TTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCT 167876
|||||||| || |||||||| || || || | || |||||||| || || |||||
Sbjct 641 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCG 582
Query 167877 GTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGT 167936
|| || ||||| |||| |||||||| || |||
Sbjct 581 GTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGT 522
Query 167937 TTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGAC 167996
||||| |||||||| || | |||||||| || ||| | ||||||||| ||
Sbjct 521 TTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGAT 462
Query 167997 GTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 168056
| | ||||||||| || ||||||||||||||||| || ||||||||||||||||||
Sbjct 461 ATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTC 402
Query 168057 CCTCTCGACCTTGCTGCTGCTGAG 168080
||||| ||||| ||||||| ||||
Sbjct 401 CCTCTAGACCTAGCTGCTGTTGAG 378
>seq2
Length=19320864
Score = 610 bits (676), Expect = 7e-170
Identities = 738/1002 (74%), Gaps = 2/1002 (0%)
Strand=Plus/Minus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| || ||||||||||| ||||||||||| || | || |||
Sbjct 8803672 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 8803613
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||| ||| | ||| | || |||||| | || || || | || || || |||
Sbjct 8803612 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 8803553
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674
|||||||| || ||||| ||||||||| | || || || ||| | || || ||||||
Sbjct 8803552 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 8803493
Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734
|||||| || || | | | |||||| | || | || ||||||||||| ||||||
Sbjct 8803492 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 8803433
Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794
|| ||||| | ||||||||| | || || || ||||||||||| || ||||||||
Sbjct 8803432 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 8803373
Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853
|||||||| |||| ||||| ||| | ||||| |||||||| || || ||| || | |
Sbjct 8803372 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 8803314
Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913
|| || || ||||| || || ||||||||||| || |||||||||||| ||||| ||
Sbjct 8803313 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 8803254
Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973
|| || || || |||||||| ||||||| || || || ||| || || | || ||
Sbjct 8803253 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 8803194
Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033
|| |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||||||
Sbjct 8803193 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 8803134
Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093
|||||| || || ||| | |||| | || |||| | || |||||||||| ||| ||
Sbjct 8803133 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 8803074
Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153
||| |||||| | | | |||||||||| |||||||| ||| || ||| || ||
Sbjct 8803073 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 8803014
Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213
||| | || || || ||||||||||| || || ||||| || ||||| || ||||||||
Sbjct 8803013 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 8802954
Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273
|||| || ||||| | ||||| |||||||||||| | ||||| || || | ||
Sbjct 8802953 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 8802894
Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333
| | |||| ||| | | || | | ||||| ||| | ||||| ||||| ||||||||
Sbjct 8802893 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 8802834
Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393
|||||||| || ||| | ||||| ||||||||||| |||||||| ||||| || || ||
Sbjct 8802833 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 8802774
Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453
|| || || ||||||||| ||||||| ||| | || || ||||| |||||||| ||
Sbjct 8802773 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 8802714
Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
| || | ||||||||||| || || || || || || || ||
Sbjct 8802713 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 8802672
Score = 605 bits (670), Expect = 3e-168
Identities = 737/1002 (74%), Gaps = 2/1002 (0%)
Strand=Plus/Plus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| || ||||||||||| ||||||||||| || | || |||
Sbjct 9134807 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 9134866
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||| ||| | ||| | || |||||| | || || || | || || || |||
Sbjct 9134867 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 9134926
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674
|||||||| || ||||| ||||||||| | || || || ||| | || || ||||||
Sbjct 9134927 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 9134986
Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734
|||||| || || | | | |||||| | || | || ||||||||||| ||||||
Sbjct 9134987 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 9135046
Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794
|| ||||| | ||||||||| | || || || ||||||||||| || ||||||||
Sbjct 9135047 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 9135106
Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853
|||||||| |||| ||||| ||| | ||||| |||||||| || || ||| || | |
Sbjct 9135107 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 9135165
Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913
|| || || ||||| || || ||||||||||| || |||||||||||| ||||| ||
Sbjct 9135166 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 9135225
Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973
|| || || || |||||||| ||||||| || || || ||| || || | || ||
Sbjct 9135226 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 9135285
Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033
|| |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||||||
Sbjct 9135286 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 9135345
Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093
|||||| || || ||| | |||| | || |||| | || |||||||||| ||| ||
Sbjct 9135346 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 9135405
Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153
||| |||||| | | | |||||||||| |||||||| ||| || ||| || ||
Sbjct 9135406 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 9135465
Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213
||| | || || || ||||||||||| || || ||| | || ||||| || ||||||||
Sbjct 9135466 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGG 9135525
Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273
|||| || ||||| | ||||| |||||||||||| | ||||| || || | ||
Sbjct 9135526 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 9135585
Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333
| | |||| ||| | | || | | ||||| ||| | ||||| ||||| ||||||||
Sbjct 9135586 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 9135645
Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393
|||||||| || ||| | ||||| ||||||||||| |||||||| ||||| || || ||
Sbjct 9135646 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 9135705
Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453
|| || || ||||||||| ||||||| ||| | || || ||||| |||||||| ||
Sbjct 9135706 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 9135765
Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
| || | ||||||||||| || || || || || || || ||
Sbjct 9135766 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 9135807
Score = 565 bits (626), Expect = 3e-156
Identities = 725/1002 (72%), Gaps = 22/1002 (2%)
Strand=Plus/Plus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
||||||||| | |||| || ||||||||||| ||||||||||| || | || |||
Sbjct 12218235 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 12218294
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||| ||| | ||| | || |||||| | || || || | || || || |||
Sbjct 12218295 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 12218354
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674
|||||||| || ||||| ||||||||| | || || || ||| | || || ||||||
Sbjct 12218355 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 12218414
Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734
|||||| || | || || || ||||||||||| ||||||
Sbjct 12218415 TCTACTCCTGC--------------------TACTCCTACTGTGGGGTCCTGAAGCACAA 12218454
Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794
|| ||||| | ||||||||| | || || || ||||||||||| || ||||||||
Sbjct 12218455 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 12218514
Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853
|||||||| |||| ||||| ||| | ||||| |||||||| || || ||| || | |
Sbjct 12218515 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 12218573
Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913
|| || || ||||| || || ||||||||||| || |||||||||||| ||||| ||
Sbjct 12218574 GCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 12218633
Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973
|| || || || |||||||| ||||||| || || || ||| || || | || ||
Sbjct 12218634 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 12218693
Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033
|| |||||| | ||||| | ||||| || ||||| |||||| |||| |||||||||||
Sbjct 12218694 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 12218753
Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093
|||||| || || ||| | | || | || |||| | || ||||||| || ||| ||
Sbjct 12218754 GATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGT 12218813
Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153
||| |||||| | | | |||||||||| |||||||| ||| || ||| || ||
Sbjct 12218814 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 12218873
Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213
||| | || || || ||||||||||| || || ||||| || ||||| || ||||||||
Sbjct 12218874 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 12218933
Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273
|||| || ||||| | ||||| |||||||||||| | ||||| || || | ||
Sbjct 12218934 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 12218993
Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333
| | |||| ||| | | || | | ||||| ||| | ||||| ||||| ||||||||
Sbjct 12218994 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 12219053
Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393
||||||| | || ||| | ||||| ||||||||||| |||||||| ||||| || || ||
Sbjct 12219054 TGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 12219113
Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453
|| || || ||||||||| ||||||| ||| | | || ||||| |||||||| ||
Sbjct 12219114 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAA 12219173
Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
| || | ||||||||||| || || || || || || || ||
Sbjct 12219174 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 12219215
Score = 143 bits (158), Expect = 3e-29
Identities = 172/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156
||| | ||||||||| | |||||||| || | || ||||| || ||| |||||||||||
Sbjct 8835038 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 8835097
Query 167157 ACGTTGCTTGCAGCAACCATCTGTTTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGAC 167216
|| || | | ||||| | ||| | ||||| ||| | | ||||||||| || ||
Sbjct 8835098 ACCTTATTGACCGCAACTTCCGTTTTTGTTATCGCATTCATTGCTGCTCCTCCAGTAGAT 8835157
Query 167217 ATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 167276
|| |||||||| || ||||| ||| |||| || || | || || ||||| || || ||
Sbjct 8835158 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCC 8835217
Query 167277 GGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGG 167330
||||| || ||||| ||||| ||||||||| | || || || || ||||||
Sbjct 8835218 GGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGG 8835271
>seq74
Length=21493
Score = 170 bits (188), Expect = 2e-37
Identities = 251/366 (69%), Gaps = 9/366 (2%)
Strand=Plus/Minus
Query 167715 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACG 167774
||||||| |||| ||| || || | ||||||| |||||||| |||||| | ||
Sbjct 11033 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAATAAACT 10974
Query 167775 TATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 167834
|| ||||| || |||||||||||||| || || || ||||||||| | ||
Sbjct 10973 TACAACATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCGTT---------TC 10923
Query 167835 AACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNN 167894
||||| || || || | || |||||||| || || ||||| || || ||||| ||||
Sbjct 10922 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 10863
Query 167895 NNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAACTTCAACCAGTCT 167954
|||||||| || |||||||| |||||||| ||
Sbjct 10862 ACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 10803
Query 167955 ATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTCAACCGTGCTGGT 168014
| |||||||| || ||| | ||||||||| || | | |||||| ||
Sbjct 10802 GTAGTTGATAGTCAAGGGCGTGTTATTAATACTTGGGCTGATATTATTAACCGTACTAAC 10743
Query 168015 CTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCT 168074
| ||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||
Sbjct 10742 TTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 10683
Query 168075 GCTGAG 168080
| ||||
Sbjct 10682 GTTGAG 10677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560603122710400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |