Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq696 612 2e-170
seq2 578 5e-160
seq74 241 2e-58
>seq696
Length=154923
Score = 612 bits (678), Expect = 2e-170
Identities = 719/969 (74%), Gaps = 6/969 (1%)
Strand=Plus/Minus
Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880
|| ||||| || | || ||||||||||| |||||||||| || | ||| | |||||
Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284
Query 181881 ATCTGTTTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGAA 181940
| ||| || | || ||| | || || ||||| || ||||| || ||||| || |||
Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224
Query 181941 CCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCC 182000
|| || |||| || || | || || ||||| || || || ||||| || | || |
Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164
Query 182001 TCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGG 182060
|| || |||||| | || || ||||| |||||||||||||| || ||||||| |||
Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104
Query 182061 CTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCC 182120
|| || ||||||||||||| |||| ||||| | ||||| | | || | || ||
Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGG--TGTA-GCT 1047
Query 182121 T---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGT 182177
| | ||||| ||||||||||||||| || ||| | ||||||||||| |||||
Sbjct 1046 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCG 987
Query 182178 GTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGT 182237
|| ||||| || ||||| || || || || ||||||| ||||| ||||||| | |||
Sbjct 986 GTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGT 927
Query 182238 CAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTG 182297
|| || || || |||| ||||| || |||||||| || || ||||||| |||| |
Sbjct 926 CAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATT 867
Query 182298 GTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGT 182357
|| ||||| ||||||||||||||||||||||| || || |||||||| |||||||| |||
Sbjct 866 GTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGT 807
Query 182358 GTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTC 182417
|||||||| || || || |||||||| ||||| ||||| ||||| || ||| | ||
Sbjct 806 GTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATC 747
Query 182418 CGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAG 182477
| || || || || | || || || | ||||||| ||||| |||||||||||
Sbjct 746 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAA 687
Query 182478 ACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCA 182537
|| || ||||| || || || || || || || || || |||||||||||||| ||
Sbjct 686 ACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 627
Query 182538 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGG 182597
|||||||| || ||||| || || |||||| | || || ||||| || || || || |||
Sbjct 626 TTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGG 567
Query 182598 TTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 182657
|| || || | ||| | || ||||| |||||||| || |||||||| ||||||||
Sbjct 566 TTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAA 507
Query 182658 TCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCT 182717
|| | ||||| |||| || ||||| |||| |||||||| ||| | | |||||||||
Sbjct 506 TCAGTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCT 447
Query 182718 GGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCT 182777
||||||||||||||||||||||| ||||| || ||||||||||| ||||| || |||
Sbjct 446 AACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 387
Query 182778 GCTGCTGAG 182786
|||| ||||
Sbjct 386 GCTGTTGAG 378
Score = 578 bits (640), Expect = 5e-160
Identities = 736/1010 (73%), Gaps = 6/1010 (1%)
Strand=Plus/Plus
Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252
||||||||| | | || ||||| || ||||| || |||||||| || | || ||
Sbjct 32730 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 32789
Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 32790 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 32849
Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372
||||| |||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 32850 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 32909
Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432
|| || |||||| | | | | |||||| | ||||||| ||||||||||| | |||
Sbjct 32910 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 32969
Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492
|| || ||| || ||||| ||| | || || || ||| |||||| || ||||||||
Sbjct 32970 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 33029
Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552
|| || || | || ||||| ||| | || || |||||||||||||| | || |
Sbjct 33030 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTG 33089
Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612
|| ||||| ||||| || || ||||||||||| |||||||||||||| ||| |||||
Sbjct 33090 CGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTA 33149
Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 183672
|| |||||||| ||||| ||| ||||||||||| |||||||| || ||||| || ||
Sbjct 33150 ATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATA 33209
Query 183673 TTTAGAT---TCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729
||| ||| |||| || |||| ||||||| || || ||||| || ||||| || |||
Sbjct 33210 TTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTTCAT 33266
Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789
||||||||||| || ||| |||| || | || || || | ||||| ||||||| ||
Sbjct 33267 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 33326
Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849
||||| ||||| || | ||||||||| || ||||| |||||| || ||| | |
Sbjct 33327 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 33386
Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909
||||||| ||||| || ||||| ||||| || || || || || ||||||||||||||
Sbjct 33387 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 33446
Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969
|||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || |
Sbjct 33447 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 33506
Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029
||| | ||| | | || |||| | | || || ||| | || || ||||| |||||
Sbjct 33507 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 33566
Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089
|| || || || ||| | ||||| |||||||||||||||||||| ||||| || ||
Sbjct 33567 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 33626
Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149
|| || ||| | || ||||| | ||||| ||| | || || ||||| || |||||
Sbjct 33627 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 33686
Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
|| ||||||| || |||||||| |||| | || || ||||||| |||
Sbjct 33687 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 33736
>seq2
Length=19320864
Score = 578 bits (640), Expect = 5e-160
Identities = 736/1010 (73%), Gaps = 6/1010 (1%)
Strand=Plus/Minus
Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252
||||||||| | | || ||||| || ||||| || |||||||| || | || ||
Sbjct 8803672 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 8803613
Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 8803612 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 8803553
Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372
||||| |||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 8803552 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 8803493
Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432
|| || |||||| | | | | |||||| | ||||||| ||||||||||| | |||
Sbjct 8803492 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 8803433
Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492
|| || ||| || ||||| ||| | || || || ||| |||||| || ||||||||
Sbjct 8803432 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 8803373
Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552
|| || || | || ||||| ||| | || || |||||||||||||| | || |
Sbjct 8803372 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTG 8803313
Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612
|| ||||| ||||| || || ||||||||||| |||||||||||||| ||| |||||
Sbjct 8803312 CGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTA 8803253
Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 183672
|| |||||||| ||||| ||| ||||||||||| |||||||| || ||||| || ||
Sbjct 8803252 ATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATA 8803193
Query 183673 TTTAGATTC---CTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729
||| ||||| || || |||| |||||||| | || ||||| || ||||| || |||
Sbjct 8803192 TTTCGATTCATCCTCTTTTTCCA--AGGGTTTC-ATAATTGGACATTGAACCCATTTCAT 8803136
Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789
||||||||||| || ||| |||| || | || || || | ||||| ||||||| ||
Sbjct 8803135 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 8803076
Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849
||||| ||||| || | ||||||||| || ||||| |||||| || ||| | |
Sbjct 8803075 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 8803016
Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909
||||||| ||||| || ||||| ||||| || || || || || ||||||||||||||
Sbjct 8803015 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 8802956
Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969
|||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || |
Sbjct 8802955 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 8802896
Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029
||| | ||| | | || |||| | | || || ||| | || || ||||| |||||
Sbjct 8802895 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 8802836
Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089
|| || || || ||| | ||||| |||||||||||||||||||| ||||| || ||
Sbjct 8802835 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 8802776
Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149
|| || ||| | || ||||| | ||||| ||| | || || ||||| || |||||
Sbjct 8802775 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 8802716
Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
|| ||||||| || |||||||| |||| | || || ||||||| |||
Sbjct 8802715 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 8802666
Score = 574 bits (636), Expect = 6e-159
Identities = 735/1010 (73%), Gaps = 6/1010 (1%)
Strand=Plus/Plus
Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252
||||||||| | | || ||||| || ||||| || |||||||| || | || ||
Sbjct 9134807 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 9134866
Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 9134867 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 9134926
Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372
||||| |||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 9134927 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 9134986
Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432
|| || |||||| | | | | |||||| | ||||||| ||||||||||| | |||
Sbjct 9134987 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 9135046
Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492
|| || ||| || ||||| ||| | || || || ||| |||||| || ||||||||
Sbjct 9135047 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 9135106
Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552
|| || || | || ||||| ||| | || || |||||||||||||| | || |
Sbjct 9135107 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTG 9135166
Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612
|| ||||| ||||| || || ||||||||||| |||||||||||||| ||| |||||
Sbjct 9135167 CGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTA 9135226
Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 183672
|| |||||||| ||||| ||| ||||||||||| |||||||| || ||||| || ||
Sbjct 9135227 ATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATA 9135286
Query 183673 TTTAGAT---TCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729
||| ||| |||| || |||| ||||||| || || ||||| || ||||| || |||
Sbjct 9135287 TTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTTCAT 9135343
Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789
||||||||||| || ||| |||| || | || || || | ||||| ||||||| ||
Sbjct 9135344 ATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACT 9135403
Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849
||||| ||||| || | ||||||||| || ||||| |||||| || ||| | |
Sbjct 9135404 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 9135463
Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909
||||||| ||||| || ||||| ||||| || || || | || ||||||||||||||
Sbjct 9135464 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTT 9135523
Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969
|||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || |
Sbjct 9135524 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 9135583
Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029
||| | ||| | | || |||| | | || || ||| | || || ||||| |||||
Sbjct 9135584 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 9135643
Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089
|| || || || ||| | ||||| |||||||||||||||||||| ||||| || ||
Sbjct 9135644 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 9135703
Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149
|| || ||| | || ||||| | ||||| ||| | || || ||||| || |||||
Sbjct 9135704 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 9135763
Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
|| ||||||| || |||||||| |||| | || || ||||||| |||
Sbjct 9135764 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 9135813
Score = 524 bits (580), Expect = 9e-144
Identities = 721/1010 (71%), Gaps = 26/1010 (3%)
Strand=Plus/Plus
Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252
||||||||| | | || ||||| || ||||| || |||||||| || | || ||
Sbjct 12218235 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 12218294
Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 12218295 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 12218354
Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTACGGCAGCTGTC 183372
||||| |||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 12218355 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 12218414
Query 183373 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAA 183432
|| || |||||| || |||| ||||||||||| | |||
Sbjct 12218415 TCTACTCCTGCTA--------------------CTCCTACTGTGGGGTCCTGAAGCACAA 12218454
Query 183433 GGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGT 183492
|| || ||| || ||||| ||| | || || || ||| |||||| || ||||||||
Sbjct 12218455 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 12218514
Query 183493 GCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATC 183552
|| || || | || ||||| ||| | || || |||||||||||||| | || |
Sbjct 12218515 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTG 12218574
Query 183553 CGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTT 183612
|| || || ||||| || || ||||||||||| |||||||||||||| ||| |||||
Sbjct 12218575 CGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTA 12218634
Query 183613 ATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATC 183672
|| |||||||| ||||| ||| ||||||||||| |||||||| || ||||| || ||
Sbjct 12218635 ATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATA 12218694
Query 183673 TTTAGAT---TCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729
||| ||| |||| || |||| ||||||| || || ||||| || ||||| || |||
Sbjct 12218695 TTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATTTCAT 12218751
Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789
||||||||||| || ||| |||| || | || || || | ||||| |||| || ||
Sbjct 12218752 ATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACT 12218811
Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849
||||| ||||| || | ||||||||| || ||||| |||||| || ||| | |
Sbjct 12218812 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 12218871
Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909
||||||| ||||| || ||||| ||||| || || || || || ||||||||||||||
Sbjct 12218872 ACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTT 12218931
Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969
|||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || |
Sbjct 12218932 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACT 12218991
Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029
||| | ||| | | || |||| | | || || ||| | || || ||||| |||||
Sbjct 12218992 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGAC 12219051
Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089
||||| | || ||| | ||||| |||||||||||||||||||| ||||| || ||
Sbjct 12219052 TTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAA 12219111
Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149
|| || ||| | || ||||| | ||||| ||| | | || ||||| || |||||
Sbjct 12219112 AATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAA 12219171
Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
|| ||||||| || |||||||| |||| | || || ||||||| |||
Sbjct 12219172 AACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 12219221
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880
|| ||||| || | || ||||||||||| |||||||||| || | ||| | |||| |
Sbjct 8835056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAA-C 8835114
Query 181881 ATCTGTTTCATCGTT---GCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGC 181937
|| |||| | ||| || ||| | || || ||||| || ||||| || ||||| ||
Sbjct 8835115 TTCCGTTT--TTGTTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGT 8835172
Query 181938 GAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCA 181997
||||| || |||| || || | || || ||||| || || || ||||| || | ||
Sbjct 8835173 GAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCT 8835232
Query 181998 TCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGG 182036
| || || |||||| | || || ||||| ||||||
Sbjct 8835233 ACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGG 8835271
>seq74
Length=21493
Score = 241 bits (266), Expect = 2e-58
Identities = 254/336 (76%), Gaps = 9/336 (3%)
Strand=Plus/Minus
Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510
||||||| ||||||||||||||| | || || ||||| || || || ||||| || ||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 182511 GGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 182570
|| || |||||||||| | ||||||| || ||||| || || |||||| |
Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 182571 GCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTC 182630
|| || ||||| || || || || ||||| || || | ||| | ||| ||||| |||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 182631 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAAC 182690
||||| || |||||||| |||||||| || | ||||| |||| || ||||| ||||
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 182691 ACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 182750
|||||||| ||| | | |||||| || |||||||||||||||||||||| |||||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 182751 GCACACAACTTCCCACTAGATCTTGCTGCTGCTGAG 182786
|| ||||||||||| ||||| || ||||||| ||||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611690678244800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |