Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq696 661 0.0 seq2 589 2e-163 seq74 223 4e-53 >seq696 Length=154923 Score = 661 bits (732), Expect = 0.0 Identities = 728/965 (75%), Gaps = 8/965 (1%) Strand=Plus/Minus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCC---CTGTTTGCTCGCCGCT 164847 ||||||||||| | || ||||| |||||| | |||||||| || ||| ||| || Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284 Query 164848 ACAATTTGTTTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGT 164907 | ||| |||||| |||||||| |||||||| || || || ||||||||||||||| Sbjct 1283 TCCGTTT---TTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGT 1227 Query 164908 GAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCG 164967 |||||||| | || ||||| | ||||| ||||| || || || ||||| | |||| Sbjct 1226 GAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCT 1167 Query 164968 TCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAA 165027 ||||| || || || | || || || || || |||||||||||| || | |||||| Sbjct 1166 ACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAA 1107 Query 165028 TGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCT 165087 ||| | ||||||||||||||||| | | |||| | ||||| | | ||||||||| Sbjct 1106 TGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCT 1047 Query 165088 TGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGC 165147 || || |||||||||||||||||||| || ||| || |||||||||||||||||| Sbjct 1046 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCG 987 Query 165148 GTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGT 165207 || |||||| || ||||| || ||||| | || |||||| || ||||||| | ||| Sbjct 986 GTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGT 927 Query 165208 CAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTC 165267 || || ||||| ||||||||||||||||| || |||||||||||||| |||| |||| | Sbjct 926 CAGGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATT 867 Query 165268 GTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGG 165327 || ||||| || || || |||||||||||||| || || |||||| | || || ||||| Sbjct 866 GTATTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGT 807 Query 165328 GTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTC 165387 |||||||| || || ||||| |||||||||||| | || ||||| | || Sbjct 806 GTATTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATC 747 Query 165388 CGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAG 165447 | || || || |||| || | || | ||||| | || || ||||||||||| Sbjct 746 AGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAA 687 Query 165448 ACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCC 165507 || || ||||| || ||||| ||||| || || || || | || |||||||| || Sbjct 686 ACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGT 627 Query 165508 TTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGG 165567 ||||||||||| ||||| | || |||||| | || || ||||| ||||| ||||| ||| Sbjct 626 TTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGG 567 Query 165568 TTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 165627 || |||||| | ||| |||| || ||||| |||||||| || |||||||| |||||||| Sbjct 566 TTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAA 507 Query 165628 TCTATTGTTGATAGTC-AGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGTGC 165686 || | |||||||||| || || | || |||||||||||| || | |||||||| Sbjct 506 TCAGTAGTTGATAGTCAAGGAC-GTGTTATTAATACTTGGGCTGATATTATTAACCGTGC 448 Query 165687 TGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACCTCGC 165746 | || |||||||||||||||||||| ||||| |||||||||||||| || ||||| || Sbjct 447 TAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 388 Query 165747 TGCTG 165751 ||||| Sbjct 387 TGCTG 383 Score = 589 bits (652), Expect = 2e-163 Identities = 725/988 (73%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 32748 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 32807 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || ||||||||||||||| | || Sbjct 32808 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 32867 Query 166311 AGCAGTTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCT 166370 || ||| | || ||| || ||| | || || |||||||||||||| || || | Sbjct 32868 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 32927 Query 166371 ATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 166430 | | |||||| | | | || ||||||||||| || ||||| ||||| | ||| Sbjct 32928 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 32987 Query 166431 TGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGT 166490 || ||| | || || || ||||| ||||||||||||||||| ||||| || |||| ||| Sbjct 32988 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 33047 Query 166491 TTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAAT 166549 || ||| | || || |||||| | ||||| ||| | | | || || || |||||||| Sbjct 33048 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAAT 33106 Query 166550 CGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCA 166609 ||| || |||||||| |||||||| || ||| |||||| || || || || || ||||| Sbjct 33107 CGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCA 33166 Query 166610 ATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTT 166669 ||| ||||||| || || || ||| || || | || || || |||||| |||| || Sbjct 33167 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTT 33226 Query 166670 CCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTAT 166729 | ||||| || || || |||||| |||||||||||||||||||||| || || ||| | Sbjct 33227 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGT 33286 Query 166730 TCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCA 166789 || || | || |||| | || || ||||||| ||| ||||| || ||| | | | | Sbjct 33287 ACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGA 33346 Query 166790 AGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTA 166849 ||||||||| |||||||| ||| || || || | ||||||| |||||||| || Sbjct 33347 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 33406 Query 166850 TTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAA 166909 ||||||||| || || ||||||| |||||| || ||||| || |||| ||| ||||| Sbjct 33407 TTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 33466 Query 166910 GAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCAT 166969 | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | | Sbjct 33467 ACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCT 33526 Query 166970 CGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAG 167029 || | | ||||| ||| | ||||| ||||| |||||||| |||||||| ||| | | Sbjct 33527 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCG 33586 Query 167030 GGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGG 167089 ||||| || ||||| || ||||| || |||||||| || || ||||| || || || || Sbjct 33587 TGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 33646 Query 167090 TATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGA 167149 ||| ||| |||||||||| || ||||| |||||||| | | |||||||||| || Sbjct 33647 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 33706 Query 167150 GGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||||| || | || |||||||| ||| Sbjct 33707 GGTTCTACCACGTGGAAACGCTCTTTAA 33734 >seq2 Length=19320864 Score = 589 bits (652), Expect = 2e-163 Identities = 725/988 (73%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 8803654 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8803595 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || ||||||||||||||| | || Sbjct 8803594 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 8803535 Query 166311 AGCAGTTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCT 166370 || ||| | || ||| || ||| | || || |||||||||||||| || || | Sbjct 8803534 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 8803475 Query 166371 ATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 166430 | | |||||| | | | || ||||||||||| || ||||| ||||| | ||| Sbjct 8803474 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 8803415 Query 166431 TGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGT 166490 || ||| | || || || ||||| ||||||||||||||||| ||||| || |||| ||| Sbjct 8803414 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 8803355 Query 166491 TTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAAT 166549 || ||| | || || |||||| | ||||| ||| | | | || || || |||||||| Sbjct 8803354 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAAT 8803296 Query 166550 CGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCA 166609 ||| || |||||||| |||||||| || ||| |||||| || || || || || ||||| Sbjct 8803295 CGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCA 8803236 Query 166610 ATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTT 166669 ||| ||||||| || || || ||| || || | || || || |||||| |||| || Sbjct 8803235 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTT 8803176 Query 166670 CCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTAT 166729 | ||||| || || || |||||| |||||||||||||||||||||| || || ||| | Sbjct 8803175 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGT 8803116 Query 166730 TCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCA 166789 || || | || |||| | || || ||||||| ||| ||||| || ||| | | | | Sbjct 8803115 ACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGA 8803056 Query 166790 AGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTA 166849 ||||||||| |||||||| ||| || || || | ||||||| |||||||| || Sbjct 8803055 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 8802996 Query 166850 TTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAA 166909 ||||||||| || || ||||||| |||||| || ||||| || |||| ||| ||||| Sbjct 8802995 TTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 8802936 Query 166910 GAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCAT 166969 | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | | Sbjct 8802935 ACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCT 8802876 Query 166970 CGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAG 167029 || | | ||||| ||| | ||||| ||||| |||||||| |||||||| ||| | | Sbjct 8802875 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCG 8802816 Query 167030 GGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGG 167089 ||||| || ||||| || ||||| || |||||||| || || ||||| || || || || Sbjct 8802815 TGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 8802756 Query 167090 TATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGA 167149 ||| ||| |||||||||| || ||||| |||||||| | | |||||||||| || Sbjct 8802755 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 8802696 Query 167150 GGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||||| || | || |||||||| ||| Sbjct 8802695 GGTTCTACCACGTGGAAACGCTCTTTAA 8802668 Score = 585 bits (648), Expect = 3e-162 Identities = 724/988 (73%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 9134825 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 9134884 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || ||||||||||||||| | || Sbjct 9134885 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 9134944 Query 166311 AGCAGTTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCT 166370 || ||| | || ||| || ||| | || || |||||||||||||| || || | Sbjct 9134945 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGCTAATAGT 9135004 Query 166371 ATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 166430 | | |||||| | | | || ||||||||||| || ||||| ||||| | ||| Sbjct 9135005 TTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 9135064 Query 166431 TGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGT 166490 || ||| | || || || ||||| ||||||||||||||||| ||||| || |||| ||| Sbjct 9135065 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 9135124 Query 166491 TTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAAT 166549 || ||| | || || |||||| | ||||| ||| | | | || || || |||||||| Sbjct 9135125 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGCAAT 9135183 Query 166550 CGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCA 166609 ||| || |||||||| |||||||| || ||| |||||| || || || || || ||||| Sbjct 9135184 CGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCA 9135243 Query 166610 ATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTT 166669 ||| ||||||| || || || ||| || || | || || || |||||| |||| || Sbjct 9135244 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTT 9135303 Query 166670 CCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTAT 166729 | ||||| || || || |||||| |||||||||||||||||||||| || || ||| | Sbjct 9135304 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGT 9135363 Query 166730 TCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCA 166789 || || | || |||| | || || ||||||| ||| ||||| || ||| | | | | Sbjct 9135364 ACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGA 9135423 Query 166790 AGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTA 166849 ||||||||| |||||||| ||| || || || | ||||||| |||||||| || Sbjct 9135424 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 9135483 Query 166850 TTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAA 166909 ||||||||| || || ||| ||| |||||| || ||||| || |||| ||| ||||| Sbjct 9135484 TTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 9135543 Query 166910 GAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCAT 166969 | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | | Sbjct 9135544 ACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCT 9135603 Query 166970 CGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAG 167029 || | | ||||| ||| | ||||| ||||| |||||||| |||||||| ||| | | Sbjct 9135604 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCG 9135663 Query 167030 GGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGG 167089 ||||| || ||||| || ||||| || |||||||| || || ||||| || || || || Sbjct 9135664 TGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 9135723 Query 167090 TATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGA 167149 ||| ||| |||||||||| || ||||| |||||||| | | |||||||||| || Sbjct 9135724 TATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 9135783 Query 167150 GGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||||| || | || |||||||| ||| Sbjct 9135784 GGTTCTACCACGTGGAAACGCTCTTTAA 9135811 Score = 558 bits (618), Expect = 4e-154 Identities = 715/988 (72%), Gaps = 22/988 (2%) Strand=Plus/Plus Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCT 166250 || || ||||||||||| ||||||||||| || | || |||| ||| ||| | ||| Sbjct 12218253 GACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCT 12218312 Query 166251 ATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCA 166310 | || |||||| |||| || || || || || || ||||||||||||||| | || Sbjct 12218313 TTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACTCATGGATTGGCC 12218372 Query 166311 AGCAGTTATCTGGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCT 166370 || ||| | || ||| || ||| | || || |||||||||||||| || Sbjct 12218373 AGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTTTCTACTCCTGC------- 12218425 Query 166371 ATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGG 166430 |||| || || ||||||||||| || ||||| ||||| | ||| Sbjct 12218426 -------------TACTCCTACTGTGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGG 12218472 Query 166431 TGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGT 166490 || ||| | || || || ||||| ||||||||||||||||| ||||| || |||| ||| Sbjct 12218473 TGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGCGCTTTCGCATTAATAGGT 12218532 Query 166491 TTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGCAAT 166549 || ||| | || || |||||| | ||||| ||| | | | || || || |||||||| Sbjct 12218533 TTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCATATAATGCAAT 12218591 Query 166550 CGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCA 166609 ||| || |||||||| |||||||| || ||| |||||| || || || || || ||||| Sbjct 12218592 CGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCTAATTTATCCACTAGGTCA 12218651 Query 166610 ATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTT 166669 ||| ||||||| || || || ||| || || | || || || |||||| |||| || Sbjct 12218652 ATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTCTT 12218711 Query 166670 CCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTAT 166729 | ||||| || || || |||||| |||||||||||||||||||||| || || ||| | Sbjct 12218712 TTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTCGCCGGTGT 12218771 Query 166730 TCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCA 166789 || || | || |||| | || || |||| || ||| ||||| || ||| | | | | Sbjct 12218772 ACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGTAGAAAATACTTTATTTGA 12218831 Query 166790 AGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTA 166849 ||||||||| |||||||| ||| || || || | ||||||| |||||||| || Sbjct 12218832 AGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCCGAAGAAACTTA 12218891 Query 166850 TTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAA 166909 ||||||||| || || ||||||| |||||| || ||||| || |||| ||| ||||| Sbjct 12218892 TTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGGGGTTGCTTTTTCCAATAA 12218951 Query 166910 GAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCAT 166969 | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| | | Sbjct 12218952 ACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCT 12219011 Query 166970 CGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAG 167029 || | | ||||| ||| | ||||| ||||| ||||||||||||||| | ||| | | Sbjct 12219012 TGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTTTGTTTCCTAGGAAATCTG 12219071 Query 167030 GGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGG 167089 ||||| || ||||| || ||||| || |||||||| || || ||||| || || || || Sbjct 12219072 TGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAATATTCTTTTAAACGAAGG 12219131 Query 167090 TATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGA 167149 ||| ||| |||||||| | || ||||| |||||||| | | |||||||||| || Sbjct 12219132 TATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGA 12219191 Query 167150 GGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 |||||| || | || |||||||| ||| Sbjct 12219192 GGTTCTACCACGTGGAAACGCTCTTTAA 12219219 Score = 116 bits (128), Expect = 4e-21 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCC---CTGTTTGCTCGCCGCT 164847 ||||||||||| | || ||||| |||||| | |||||||| || ||| ||| || Sbjct 8835056 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 8835115 Query 164848 ACAATTTGTTTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGT 164907 | ||| | |||| |||||||| |||||||| || || || ||||||||||||||| Sbjct 8835116 TCCGTTTTTGTTATC---GCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGT 8835172 Query 164908 GAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCG 164967 |||||||| | || ||||| | ||||| ||||| || || || ||||| | |||| Sbjct 8835173 GAACCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCT 8835232 Query 164968 TCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGG 165006 ||||| || || || | || || || || || ||| Sbjct 8835233 ACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGG 8835271 >seq74 Length=21493 Score = 223 bits (246), Expect = 4e-53 Identities = 247/331 (75%), Gaps = 9/331 (3%) Strand=Plus/Minus Query 165421 GGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTC 165480 ||||| | || || ||||||||| | || || ||||| || ||||| || || || || Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944 Query 165481 GGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTC 165540 || || | || |||| | |||||||||| ||||| | || |||||| | Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893 Query 165541 GCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTC 165600 || || ||||| ||||| ||||| ||||| |||||| | ||| ||||||| ||||| ||| Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833 Query 165601 AACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCT 165660 ||||| || |||||||| |||||||| || | ||||||||||| | || | Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773 Query 165661 ACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAAC 165720 ||||||||||| || | |||||| || | |||||||||||||||||||| ||||| Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713 Query 165721 GCTCACAACTTCCCCCTCGACCTCGCTGCTG 165751 |||||||||||||| || ||||| ||||||| Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTG 10682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563655896151040