Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2 143 2e-29 seq6 113 3e-20 seq4 113 3e-20 seq7 89.7 4e-13 seq1 86.0 5e-12 >seq2 Length=19320864 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || || ||||||||| || |||||||||| | Sbjct 9126474 CCACCTCTGAGACGAAGCACCAAATGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGCT 9126533 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | ||| | || || | ||||||||||||||| || |||| ||||||||||| || Sbjct 9126534 AAAGTACGACCATCCTCAAGCTGCTTACCGGCAAAGATGAGTCTCTGTTGATCCGGAGGG 9126593 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||||| || ||| | | | || ||||| ||| ||| Sbjct 9126594 ATACCTTCCTTGTCTTGAATCTTTGCCTTGACATTATCAATAGTGTCTGAGCTCTCAACC 9126653 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || ||||| || | || || |||||||||||||| Sbjct 9126654 TCCAAAGTAATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 9126700 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || || |||||| || ||||||||||||| Sbjct 9126702 CCACCTCTAAGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCG 9126761 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| |||| || | ||||||||| ||||| || || | ||| ||||||| || Sbjct 9126762 AGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGG 9126821 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || |||||| ||| ||| | | | || ||||| || ||| Sbjct 9126822 ATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACC 9126881 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || ||||| || || |||||||||||||| Sbjct 9126882 TCCAAAGTAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 9126928 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || || |||||| || ||||||||||||| Sbjct 9215483 CCACCTCTAAGACGAAGCACCAAATGAAGTGTAGACTCTTTCTGGATATTGTAATCAGCG 9215542 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | ||| |||| || | ||||||||| ||||| || || | ||| ||||||| || Sbjct 9215543 AGTGTGCGACCGTCCTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCCGGAGGG 9215602 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || |||||| ||| ||| | | | || ||||| || ||| Sbjct 9215603 ATTCCTTCCTTATCCTGAATCTTAGCTTTAACATTATCAATAGTATCTGAACTTTCAACC 9215662 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| || ||||| || || |||||||||||||| Sbjct 9215663 TCCAAAGTAATGGTTTTGCCAGTCAACGTCTTCACAAAAATCTGCAT 9215709 Score = 109 bits (120), Expect = 4e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || ||| ||||| || |||||||||| || | || Sbjct 9215036 AGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGT 9215095 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTC 48667 | || || | ||||||||||||||| || || | |||||| || |||||| | ||||| Sbjct 9215096 CCATCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATC-CCCTC 9215154 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| |||||| || || | | | | ||||| ||| ||||||| ||| Sbjct 9215155 CTTGTCCTGAATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGT 9215214 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || || ||||||||||| ||||| || ||||| Sbjct 9215215 AATGGTCTTGCCTGTCAAAGTTTTCACAAATATTTGCAT 9215253 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || || |||||||||| || | | ||| | || || Sbjct 9125808 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCTAAAGTCCGACCATCCTCG 9125867 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTCCTTGTCGCT 48676 | ||| ||||| || || || |||| |||||| || | ||||| | ||||||||||| Sbjct 9125868 AGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATC-CCCTCCTTGTCCTG 9125926 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| || || | | | | ||||| ||| ||||||| |||||| || || Sbjct 9125927 AATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAACCTCCAACGTAATGGTCTT 9125986 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| ||||| || ||||| Sbjct 9125987 GCCTGTCAAAGTTTTCACAAATATTTGCAT 9126016 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || || || || || ||||| |||| | | | ||| Sbjct 9215264 AGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCCAAAGTCCGA 9215323 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 | || || | ||| ||||| || || || |||| |||||| || | ||||| | || || Sbjct 9215324 CCATCCTCGAGCTGTTTACCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATC-CCTTC 9215382 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| ||||| ||| ||| | | | || ||||| ||| ||||||| || Sbjct 9215383 CTTGTCCTGGATCTTAGCTTTAACATTATCGATAGTGTCTGAGCTCTCAACCTCCAAAGT 9215442 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || ||||| || | || || |||||||||||||| Sbjct 9215443 AATGGTCTTTCCAGTGAGGGTCTTCACAAAAATCTGCAT 9215481 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || || || |||||||||| | | | ||| | || || Sbjct 9214589 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCG 9214648 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||| ||||| || || || || | |||||| || | || | ||||||||||| | Sbjct 9214649 AGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGCGGGATCCCCTCCTTGTCCTGA 9214708 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | | ||||| ||| ||||||| ||||| || || Sbjct 9214709 ATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCTTG 9214768 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || ||||| || ||||| Sbjct 9214769 CCTGTCAAAGTCTTCACAAAGATTTGCAT 9214797 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| || || ||| ||||| || |||||||||| || | || Sbjct 9126255 AGACGAAGCACAAGATGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGCAAGGGTGCGT 9126314 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTC 48667 | || || | ||||||||||||||| || || | |||||| || |||||| | ||||| Sbjct 9126315 CCATCTTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATC-CCCTC 9126373 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| |||||| || || | | | | ||||| ||| | ||||| || Sbjct 9126374 CTTGTCCTGAATCTTAGCCTTGACGTTATCGATTGTGTCTGAGCTCTCAATCTCCAAAGT 9126433 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || ||||| |||||||| Sbjct 9126434 GATGGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCAT 9126472 >seq6 Length=25113588 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || || |||||| || || ||||| |||| Sbjct 905420 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCA 905479 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| |||| || | ||||||||||||||| || || | |||||| |||| ||| Sbjct 905480 AGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGA 905539 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||| ||| ||| | | | | ||||| ||| ||| Sbjct 905540 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACC 905599 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| ||||| || || | || || ||||| |||||||| Sbjct 905600 TCGAGGGTAATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 905646 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || ||| || ||||| |||||||||| | | ||| Sbjct 23404180 AGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAATCAGCCAAAGTTCTG 23404121 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| ||||| || |||| | ||| || |||| || | ||||| Sbjct 23404120 CCATCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCT 23404061 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| || | | | || || ||||||||||| || Sbjct 23404060 TTGTCTTGGATCTTGGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTG 23404001 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||||||| || |||||||||||||| Sbjct 23404000 ATAGTCTTTCCAGTCAAAGTCTTGACAAAAATCTGCAT 23403963 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||||||||| || |||||||||| ||| | ||| | || || | ||| || || || || Sbjct 10622509 CTCTTTTTGGATGTTGTAATCAGCTAGTGTCCGACCATCCTCAAGCTGTTTCCCAGCGAA 10622450 Query 48635 TATCAGTCGCTGTTGATCCG-TGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAG 48693 || |||| ||| || |||| ||||| | || |||||||| |||||| || ||| Sbjct 10622449 GATAAGTCTCTGCTGGTCCGGTGGGATC-CCTTCCTTGTCCTGAATCTTAGCCTTGACAT 10622391 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | | | ||||| ||| ||||||| || || || || || |||| || || | Sbjct 10622390 TATCAATCGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCGGTCAGGGTCTTCA 10622331 Query 48754 CAAAAATCTGCAT 48766 | ||||||||||| Sbjct 10622330 CGAAAATCTGCAT 10622318 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || ||||||||||| || || ||| || ||||| ||||| |||| | | ||| Sbjct 22900882 AGACGTAACACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTG 22900823 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||| ||||| || |||| | ||| || |||| |||| ||||| Sbjct 22900822 CCGTCTTCAAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCT 22900763 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| ||| | | | || || ||||||||||| || Sbjct 22900762 TTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTG 22900703 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || || || || ||||| Sbjct 22900702 ATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22900665 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || || || ||| || || || |||||||| | | | ||| Sbjct 22901110 AGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTACGA 22901051 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||||||| || ||||| || |||| | ||| || |||| || | || ||| Sbjct 22901050 CCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCTTCC 22900991 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||||| || || | | || ||||| ||||||||||| || Sbjct 22900990 TTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCTGAACTCTCCACCTCCAAGGTG 22900931 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | ||| || |||||||||||||| Sbjct 22900930 ATGGTCTTTCCGGTGAGAGTCTTCACAAAAATCTGCAT 22900893 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || || || ||||| |||||||||| || | | ||| Sbjct 905201 AGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCTAAAGTCCGA 905260 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 | || || | ||| ||||| || || || || | |||||| || | ||||| | || || Sbjct 905261 CCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGGGATC-CCTTC 905319 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| |||||| || ||| | | | | ||||| ||||||||||| || Sbjct 905320 CTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCACCTCCAAAGT 905379 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| |||||||| Sbjct 905380 TATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 905418 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || || || || ||||||||||| | || | ||| Sbjct 8748561 AGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGGATATTGTAATCCGCAAGTGTCCGA 8748620 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTC 48667 | || || | ||| || || || || || |||| |||||| || |||||| | || || Sbjct 8748621 CCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGTTGGTCTGGTGGGATC-CCTTC 8748679 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| |||||| || ||| | | | | ||||| ||| ||||| | || Sbjct 8748680 CTTGTCTTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCGACCTCAAGAGT 8748739 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| |||||||| || | || || |||||||||||||| Sbjct 8748740 AATGGTTTTTCCGGTAAGTGTCTTCACAAAAATCTGCAT 8748778 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || || || |||||||||||||| | ||| | ||| Sbjct 10622763 AGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAATCCGCAAGAGTCCGA 10622704 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTC 48667 | || || | ||| ||||| || || || |||| ||| ||||| |||||| | || || Sbjct 10622703 CCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGATCTGGTGGGATC-CCTTC 10622645 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 ||||| ||| || || ||| | | | | ||||| ||| ||||||| || Sbjct 10622644 TTTGTCCTGAATTTTGGCCTTGACATTATCGATTGTGTCTGAACTCTCAACCTCCAAAGT 10622585 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| |||||||| || | || || ||||| || ||||| Sbjct 10622584 AATGGTTTTTCCGGTAAGGGTCTTCACAAAGATTTGCAT 10622546 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || ||||| |||| || ||| | || ||||||||||| ||||| || Sbjct 22758832 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTTCTGCCATCCTCCAACTGCTTTCCGGCGAA 22758891 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| | ||| ||||||| |||| |||||||| || |||||| || || Sbjct 22758892 GATCAACCTCTGCTGATCCGGAGGAATACCCTCCTTATCTTGAATCTTGGCCTTCACGTT 22758951 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || ||||||||| | |||||||| || ||||| | || || || Sbjct 22758952 GTCGATAGTGTCAGAACTCTCCACCTCAAGAGTAATCGTCTTCCCCGTTAGGGTCTTGAC 22759011 Query 48755 AAAAATCTGCAT 48766 ||||||||||| Sbjct 22759012 GAAAATCTGCAT 22759023 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || || || ||| || ||||| ||||| |||| | | ||| Sbjct 22758578 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTTCTG 22758637 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || || |||||||| |||| || ||| || |||| || | ||||| Sbjct 22758638 CCATCTTCAAGTTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCCGGAGGGATACCCTCT 22758697 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| ||| | | | || || ||||||||||| || Sbjct 22758698 TTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTG 22758757 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || || || || ||||| Sbjct 22758758 ATAGTCTTTCCAGTCAACGTCTTGACGAAGATTTGCAT 22758795 >seq4 Length=23328337 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||||||| || || |||||| || || ||||| |||| Sbjct 15771341 CCACCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAGTCAGCA 15771400 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||| |||| || | ||||||||||||||| || || | |||||| |||| ||| Sbjct 15771401 AGAGTTCTTCCGTCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCCGGAGGA 15771460 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || |||||||| ||||| ||| ||| | | | | ||||| ||| ||| Sbjct 15771461 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTATCAATGGTGTCTGAACTCTCAACC 15771520 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| ||||| || || | || || ||||| |||||||| Sbjct 15771521 TCGAGGGTAATTGTTTTACCAGTGAGGGTCTTCACAAAGATCTGCAT 15771567 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||| | || || || || || ||||| |||||||||| || | | ||| Sbjct 15771122 AGACGCAACACAAGGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGCTAAAGTCCGA 15771181 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 | || || | ||| ||||| || || || || | |||||| || | ||||| | || || Sbjct 15771182 CCATCCTCAAGCTGTTTACCAGCGAAGATGAGCCTCTGTTGGTCTGGTGGGATC-CCTTC 15771240 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 |||||| |||||| || ||| | | | | ||||| ||||||||||| || Sbjct 15771241 CTTGTCCTGAATCTTAGCCTTGACATTATCAATTGTGTCTGAGCTCTCCACCTCCAAAGT 15771300 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| |||||||| Sbjct 15771301 TATGGTCTTGCCGGTTAGGGTCTTCACAAAGATCTGCAT 15771339 >seq7 Length=24649197 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || ||||| |||||||| | || | ||| |||| || | ||||||||||||||| Sbjct 18994163 CTCCTTCTGAATGTTGTAATCTGCAAGGGTGCGACCGTCCTCAAGCTGCTTACCGGCAAA 18994222 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||| ||| || |||| || | || ||||| || |||||| ||| | | Sbjct 18994223 GATAAGTCTCTGCTGGTCCGGAGGGATCCCTTCCTTATCTTGAATCTTAGCTTTAAGATT 18994282 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | ||||| ||| ||||||| || || ||||| || || | ||||| || Sbjct 18994283 GTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTTATGGTTTTGCCAGTGAGGGTTTTCAC 18994342 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 18994343 AAAGATCTGCAT 18994354 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| |||||||||||||| | || | | ||| | || || | ||| || |||||||| Sbjct 18993479 CTCTTTCTGAATATTGTAATCCGCTAAAGTACGACCATCCTCGAGCTGTTTTCCGGCAAA 18993538 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAAC---GCCCTCCTTGTCGCTAATCTTTTGTTTTAC 48691 || || | ||| || ||| ||||| || || ||||| |||||| ||||| Sbjct 18993539 GATTAGCCTCTGCTGGTCC---GGAACTATCCCTTCTTTGTCCTGAATCTTGGCCTTTAC 18993595 Query 48692 AGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTT 48751 | | | || || ||| ||||| | || || || || ||||||||||| || Sbjct 18993596 GTTGTCAATCGTATCAGAGCTCTCGACCTCAAGTGTGATGGTCTTGCCCGTCAAAGTCTT 18993655 Query 48752 TACAAAAATCTGCATC 48767 ||||||||||||||| Sbjct 18993656 GACAAAAATCTGCATC 18993671 >seq1 Length=33132539 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || || |||||||| | || | | ||| | || || | ||||| |||||||| Sbjct 29081721 CTCTTTCTGGATGTTGTAATCCGCTAAAGTGCGACCATCTTCAAGTTGCTTCCCGGCAAA 29081662 Query 48635 TATCAGTCGCTGTTGATCCG-TGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAG 48693 || || | ||| || |||| ||||| | || || ||||| |||||| || ||| Sbjct 29081661 GATTAGCCTCTGCTGGTCCGGTGGGATC-CCTTCTTTGTCCTGGATCTTTGCCTTCACAT 29081603 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | | || || ||||| || | ||| || || |||||||||||||| || | Sbjct 29081602 TGTCAATGGTATCAGAGCTTTCCACTTCAAGCGTGATGGTCTTTCCCGTCAAAGTCTTGA 29081543 Query 48754 CAAAAATCTGCATC 48767 |||| ||||||||| Sbjct 29081542 CAAATATCTGCATC 29081529 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || || ||| ||||| || |||||||| | ||| | ||| Sbjct 29081519 AGACGCAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTGTAATCTGCAAGAGTGCGA 29081460 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || |||| |||||| || || || | || ||| Sbjct 29081459 CCATCCTCAAGCTGCTTGCCTGCAAAGATAAGTCTCTGTTGGTCTGTTGGGATCCCTTCC 29081400 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | | || || ||| ||||||| || Sbjct 29081399 TTGTCTTGTATCTTGGCCTTCACGTTATCGATTGTGTCCGAGCTCTCAACCTCCAAAGTT 29081340 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| ||||| || | || || || |||||||||||| Sbjct 29081339 ATCGTCTTTCCGGTTAGGGTCTTGACGAAAATCTGCATC 29081301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380934368696808