Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_019444.1
Length=176043
Score E
Sequences producing significant alignments: (Bits) Value
seq696 520 1e-142
seq2 515 4e-141
seq74 208 9e-49
seq1 98.7 1e-15
>seq696
Length=154923
Score = 520 bits (576), Expect = 1e-142
Identities = 695/966 (72%), Gaps = 0/966 (0%)
Strand=Plus/Minus
Query 162919 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 162978
||||| || || | || ||||| || || ||||||| || || | ||| | ||||||
Sbjct 1343 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 1284
Query 162979 ATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGTGAG 163038
| ||| || |||| ||| | |||||||| || || || ||||| || || |||||
Sbjct 1283 TCCGTTTTTATTATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAA 1224
Query 163039 CCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATCT 163098
|| || |||| || || | || || ||||| || || || ||||| || |||| ||
Sbjct 1223 CCTGTTTCTGGATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACT 1164
Query 163099 TCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGG 163158
|| || |||||| | || || || || ||||||||||| ||||| ||||||| |||
Sbjct 1163 TCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGG 1104
Query 163159 CTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGCA 163218
|| || ||||||||||||| |||| | || | ||||| | | || | |
Sbjct 1103 CTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGT 1044
Query 163219 TATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGTA 163278
|||||||| ||||| ||||||||| | || | |||||||| || ||||| ||
Sbjct 1043 TATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTT 984
Query 163279 GCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAA 163338
||||| || || ||||||||||| || | || || ||| || ||||||| | |||||
Sbjct 983 GCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAG 924
Query 163339 GGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATGCTTGTC 163398
|| ||| ||||| | ||||| || || |||||||| || ||||||| ||| ||||
Sbjct 923 GGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 864
Query 163399 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGTGTC 163458
||||| || ||||||||||| || |||||||| || || ||||| || || ||||||||
Sbjct 863 TTCCAGGCTGAGCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTA 804
Query 163459 TTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACTCGTCCGT 163518
||||| || || || || || |||||||| | || || ||| | || |
Sbjct 803 TTCGGCGGCTCCCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGG 744
Query 163519 GAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACA 163578
|| || || |||| ||| || || | ||||||| || || ||||||||||| ||
Sbjct 743 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACT 684
Query 163579 TACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCATTC 163638
|||||||| || || || || || || || || || ||||||||||||||||| |||
Sbjct 683 TACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 624
Query 163639 AACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAATCTGGTTT 163698
||||| | | | || |||||| | || || ||||| || || || || ||||||
Sbjct 623 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 564
Query 163699 ACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCC 163758
||||| | || | || || ||||| |||||||| || |||||||| |||||||| ||
Sbjct 563 ACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 504
Query 163759 ATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGGT 163818
| ||||| |||| || ||||| | || |||||||| || | ||||||| |||
Sbjct 503 GTAGTTGATAGTCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAAC 444
Query 163819 CTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTGCT 163878
|| |||||||||||||||||||| ||||| || ||||||||||| || || || ||||||
Sbjct 443 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 384
Query 163879 GCTGAG 163884
| ||||
Sbjct 383 GTTGAG 378
Score = 515 bits (570), Expect = 4e-141
Identities = 720/1007 (71%), Gaps = 2/1007 (0%)
Strand=Plus/Plus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | | || ||||| |||||||| || |||||||| || | || ||
Sbjct 32730 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 32789
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 32790 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 32849
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTC 164798
|| || ||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 32850 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 32909
Query 164799 TCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 164858
|| || |||||| || | | | |||||| | | |||| ||||||||||| | ||
Sbjct 32910 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 32969
Query 164859 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGT 164918
|| |||| || ||||| ||| | || || |||||| ||| || |||||||||||
Sbjct 32970 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 33029
Query 164919 GCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTAT 164977
|| ||||| |||| ||||| ||| | || || ||||| || || || ||| | | |
Sbjct 33030 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 33088
Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037
|| ||||| ||||| || || ||||||||||| |||||||||||||| ||||||||
Sbjct 33089 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 33148
Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097
|| || ||||| ||||| || ||||||| || || || ||||| || || || ||
Sbjct 33149 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 33208
Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157
||| ||||| | | || | ||||| || || || ||||| | ||||| || |||||
Sbjct 33209 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 33268
Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217
|||||| || || ||| | |||| | || |||||| ||||||||||| | || ||
Sbjct 33269 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 33328
Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277
|||||||| |||| || ||||| || |||||||| || || ||| | | ||
Sbjct 33329 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 33388
Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337
|| | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| ||
Sbjct 33389 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 33448
Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397
|||| ||||| || || || ||| | ||||| || ||||| ||||| || || | ||
Sbjct 33449 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 33508
Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457
| | |||| || |||| | | ||||| ||| | ||||| ||||| || || ||
Sbjct 33509 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 33568
Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517
||| ||||| ||| | ||||| |||||||||||||||||||| ||||| || |||||
Sbjct 33569 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 33628
Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577
|| || || || ||||| | ||||||||| |||| || ||||| || ||||||||
Sbjct 33629 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 33688
Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
| |||| ||||| || || || | || | || ||||| |||||||
Sbjct 33689 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 33735
>seq2
Length=19320864
Score = 515 bits (570), Expect = 4e-141
Identities = 720/1007 (71%), Gaps = 2/1007 (0%)
Strand=Plus/Minus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | | || ||||| |||||||| || |||||||| || | || ||
Sbjct 8803672 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 8803613
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 8803612 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 8803553
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTC 164798
|| || ||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 8803552 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 8803493
Query 164799 TCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 164858
|| || |||||| || | | | |||||| | | |||| ||||||||||| | ||
Sbjct 8803492 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 8803433
Query 164859 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGT 164918
|| |||| || ||||| ||| | || || |||||| ||| || |||||||||||
Sbjct 8803432 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 8803373
Query 164919 GCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTAT 164977
|| ||||| |||| ||||| ||| | || || ||||| || || || ||| | | |
Sbjct 8803372 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 8803314
Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037
|| ||||| ||||| || || ||||||||||| |||||||||||||| ||||||||
Sbjct 8803313 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 8803254
Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097
|| || ||||| ||||| || ||||||| || || || ||||| || || || ||
Sbjct 8803253 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 8803194
Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157
||| ||||| | | || | ||||| || || || ||||| | ||||| || |||||
Sbjct 8803193 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 8803134
Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217
|||||| || || ||| | |||| | || |||||| ||||||||||| | || ||
Sbjct 8803133 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 8803074
Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277
|||||||| |||| || ||||| || |||||||| || || ||| | | ||
Sbjct 8803073 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 8803014
Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337
|| | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| ||
Sbjct 8803013 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 8802954
Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397
|||| ||||| || || || ||| | ||||| || ||||| ||||| || || | ||
Sbjct 8802953 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 8802894
Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457
| | |||| || |||| | | ||||| ||| | ||||| ||||| || || ||
Sbjct 8802893 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 8802834
Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517
||| ||||| ||| | ||||| |||||||||||||||||||| ||||| || |||||
Sbjct 8802833 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 8802774
Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577
|| || || || ||||| | ||||||||| |||| || ||||| || ||||||||
Sbjct 8802773 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 8802714
Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
| |||| ||||| || || || | || | || ||||| |||||||
Sbjct 8802713 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 8802667
Score = 511 bits (566), Expect = 5e-140
Identities = 719/1007 (71%), Gaps = 2/1007 (0%)
Strand=Plus/Plus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | | || ||||| |||||||| || |||||||| || | || ||
Sbjct 9134807 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 9134866
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 9134867 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 9134926
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTC 164798
|| || ||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 9134927 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 9134986
Query 164799 TCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 164858
|| || |||||| || | | | |||||| | | |||| ||||||||||| | ||
Sbjct 9134987 TCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGTCCTGAAGCACAA 9135046
Query 164859 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGT 164918
|| |||| || ||||| ||| | || || |||||| ||| || |||||||||||
Sbjct 9135047 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 9135106
Query 164919 GCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTAT 164977
|| ||||| |||| ||||| ||| | || || ||||| || || || ||| | | |
Sbjct 9135107 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 9135165
Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037
|| ||||| ||||| || || ||||||||||| |||||||||||||| ||||||||
Sbjct 9135166 GCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 9135225
Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097
|| || ||||| ||||| || ||||||| || || || ||||| || || || ||
Sbjct 9135226 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 9135285
Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157
||| ||||| | | || | ||||| || || || ||||| | ||||| || |||||
Sbjct 9135286 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 9135345
Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217
|||||| || || ||| | |||| | || |||||| ||||||||||| | || ||
Sbjct 9135346 GATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCATGGTGCTACTGT 9135405
Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277
|||||||| |||| || ||||| || |||||||| || || ||| | | ||
Sbjct 9135406 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 9135465
Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337
|| | ||||| |||||||| |||||||| || ||| |||| ||||| || ||||| ||
Sbjct 9135466 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCACAAATCTTTGG 9135525
Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397
|||| ||||| || || || ||| | ||||| || ||||| ||||| || || | ||
Sbjct 9135526 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 9135585
Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457
| | |||| || |||| | | ||||| ||| | ||||| ||||| || || ||
Sbjct 9135586 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 9135645
Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517
||| ||||| ||| | ||||| |||||||||||||||||||| ||||| || |||||
Sbjct 9135646 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 9135705
Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577
|| || || || ||||| | ||||||||| |||| || ||||| || ||||||||
Sbjct 9135706 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 9135765
Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
| |||| ||||| || || || | || | || ||||| |||||||
Sbjct 9135766 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 9135812
Score = 457 bits (506), Expect = 1e-123
Identities = 704/1007 (70%), Gaps = 22/1007 (2%)
Strand=Plus/Plus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
||||||||| | | || ||||| |||||||| || |||||||| || | || ||
Sbjct 12218235 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTT 12218294
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||| ||| | || | || |||||| | || || ||| | ||||| || |||
Sbjct 12218295 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 12218354
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTC 164798
|| || ||||| | || ||||||| | |||||| || ||| | || || || ||
Sbjct 12218355 TATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTAACCGCTGCAGTT 12218414
Query 164799 TCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 164858
|| || |||||| || ||||| ||||||||||| | ||
Sbjct 12218415 TCTACTCCTGCTA--------------------CTCCTACTGTGGGGTCCTGAAGCACAA 12218454
Query 164859 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGT 164918
|| |||| || ||||| ||| | || || |||||| ||| || |||||||||||
Sbjct 12218455 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTTGCTCTCCACGGC 12218514
Query 164919 GCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTAT 164977
|| ||||| |||| ||||| ||| | || || ||||| || || || ||| | | |
Sbjct 12218515 GCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 12218573
Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037
|| || || ||||| || || ||||||||||| |||||||||||||| ||||||||
Sbjct 12218574 GCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTTTCTGTCTTCCT 12218633
Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097
|| || ||||| ||||| || ||||||| || || || ||||| || || || ||
Sbjct 12218634 AATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCTAT 12218693
Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157
||| ||||| | | || | ||||| || || || ||||| | ||||| || |||||
Sbjct 12218694 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 12218753
Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217
|||||| || || ||| | | || | || |||||| |||||||||| | || ||
Sbjct 12218754 GATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCATGTTGCTACTGT 12218813
Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277
|||||||| |||| || ||||| || |||||||| || || ||| | | ||
Sbjct 12218814 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 12218873
Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337
|| | ||||| |||||||| |||||||| || |||||||| ||||| || ||||| ||
Sbjct 12218874 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCACAAATCTTTGG 12218933
Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397
|||| ||||| || || || ||| | ||||| || ||||| ||||| || || | ||
Sbjct 12218934 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGG 12218993
Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457
| | |||| || |||| | | ||||| ||| | ||||| ||||| || || ||
Sbjct 12218994 TTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGTGCCTATGACTT 12219053
Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517
|| |||| ||| | ||||| |||||||||||||||||||| ||||| || |||||
Sbjct 12219054 TGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTCTATACTAAAAA 12219113
Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577
|| || || || ||||| | ||||||||| || | || ||||| || ||||||||
Sbjct 12219114 TATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAGCCTCATGAAAA 12219173
Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
| |||| ||||| || || || | || | || ||||| |||||||
Sbjct 12219174 CCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 12219220
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 164046 AGTGTGAAGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATT 164105
||||||| || || ||| |||| ||||| || || ||||| ||| | ||| | |
Sbjct 2824595 AGTGTGACGACGACGTTTACGTTCTTGACGCGGCCGAGGAAGCTGGAATCGATTTGCCAT 2824536
Query 164106 ACTCTTGTCGTGCTGGTGCTTGCTCCTCATGTGCAGGTAAAATTGTATCTGGAACTGTTG 164165
||||||| ||||||||| |||| || ||||| |||||| |||| |||||| ||||||
Sbjct 2824535 ACTCTTGCCGTGCTGGTTCTTGTTCAAGCTGTGCTGGTAAAGTTGTGTCTGGATCTGTTG 2824476
Query 164166 ATCAGAGTGATCAGTCATTCCTAGACGATGATCAGATTGCAGCAGGATTCGTGCTTACGT 164225
||||| ||| ||| ||||| || ||||| ||||||| ||| || || || || |
Sbjct 2824475 ATCAGTCTGACCAGAGTTTCCTTGATGATGAGCAGATTGGTCAAGGGTTTGTTCTCACTT 2824416
Query 164226 GTGTAGCATATCCAACATCTGAT 164248
||| || ||||| || ||||||
Sbjct 2824415 GTGCTGCTTATCCTACTTCTGAT 2824393
>seq74
Length=21493
Score = 208 bits (230), Expect = 9e-49
Identities = 247/336 (74%), Gaps = 9/336 (3%)
Strand=Plus/Minus
Query 163549 GGTTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTC 163608
||||||| || |||||||||||| | || |||||||| || || || ||||| || ||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 163609 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTG 163668
|| || |||||||||| | ||||||| | | | || |||||| |
Sbjct 10943 GGCCGATTGATCTTCCGTT---------TCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 163669 GCAGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTC 163728
|| || ||||| || || || || ||||||||||| | || | ||||| ||||| |||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 163729 AACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAAC 163788
||||| || |||||||| |||||||| || | ||||| |||| || ||||| | ||
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 163789 ACTTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAAC 163848
|||||||| || | ||||||| || | |||||||||||||||||||| |||||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 163849 GCACACAACTTCCCACTCGATCTTGCTGCTGCTGAG 163884
|| ||||||||||| || || || ||||||| ||||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677
>seq1
Length=33132539
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 164021 ACTCCTGAGGGAGAAACAGTTGTCCAGTGTGAAGAGGATCAATACATTCTAGACGCAGCA 164080
|| |||||||||||| || || |||| ||||| ||| | | | || ||||| ||
Sbjct 4367137 ACACCTGAGGGAGAACAAGAAGTGGAGTGCGAAGAAGATGTCTTCGTCCTCGACGCTGCT 4367196
Query 164081 GAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGTGCTTGCTCCTCATGTGCA 164140
|| ||||| ||| |||| | ||||| || ||||| ||| ||||||| || ||
Sbjct 4367197 GAGGAAGCCGGAATTGACTTGCCGTACTCATGCCGTGCCGGTTCTTGCTCAAGTTGCGCC 4367256
Query 164141 GGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCATTCCTAGACGATGATCAG 164200
|| ||| | || ||||| || |||| ||| || ||| ||| |||||||||| |||
Sbjct 4367257 GGGAAAGTCGTCTCTGGCTCTATTGACCAGTCGGACCAGAGCTTCTTAGACGATGAACAG 4367316
Query 164201 ATTGCAGC--AGGATTCGTGCTTACGTGTGTAGCATATCCAACATCTGAT 164248
|| |||| ||| | || | || ||||| || ||||| || ||||||
Sbjct 4367317 AT--CAGCGAAGGCTATGTCTTGACCTGTGTGGCTTATCCGACTTCTGAT 4367364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563204700076480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |