Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq696 670 0.0
seq2 587 8e-163
seq74 199 4e-46
>seq696
Length=154923
Score = 670 bits (742), Expect = 0.0
Identities = 724/955 (76%), Gaps = 8/955 (1%)
Strand=Plus/Minus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGC---TTCAT 8345
|| |||||||| ||| | |||||||| ||| || ||| |||| || || | || ||
Sbjct 1328 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAAC---TTCCGTTTTTAT 1273
Query 8346 TACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGG 8405
|| ||||||| ||||||||||||| || || || || || || || ||||| ||| ||||
Sbjct 1272 TATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGG 1213
Query 8406 ATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAAT 8465
|||||| | ||||| ||||| || || || ||||| || |||| | ||| || ||
Sbjct 1212 ATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTAT 1153
Query 8466 TGGCCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGG 8525
||| | || || ||||| ||||||||||| || || ||||||| ||||| ||||||||
Sbjct 1152 TGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGG 1093
Query 8526 TGGTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCG 8585
||||||||| | || | ||| | ||||| | ||||| || | ||||||||||||
Sbjct 1092 TGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCG 1033
Query 8586 TGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGC 8645
||| ||||||||| || ||| || || |||||||||||||| |||||||| || ||
Sbjct 1032 TGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGC 973
Query 8646 TCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTC 8705
||||||||| ||||| ||||||| ||| | ||||||| ||||||| || || ||
Sbjct 972 TCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTC 913
Query 8706 TGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGA 8765
||||||||||||||| || ||||| ||||| ||||||| |||| |||| |||||||||||
Sbjct 912 TGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGA 853
Query 8766 GCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATC 8825
||||||||| || |||||||| || |||||| | ||||| |||||||| |||||||| ||
Sbjct 852 GCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTC 793
Query 8826 TCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGA 8885
|| ||| || ||||||||||| | || |||||| || | | || ||||| ||
Sbjct 792 CCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGA 733
Query 8886 AACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGT 8945
|| || ||| || | || |||| ||||| |||||||| |||||||||||||||||
Sbjct 732 AAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGT 673
Query 8946 TGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAG 9005
|| ||||| || || ||||| || ||||||||||||||||| ||| ||||||||| |
Sbjct 672 AGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCG 613
Query 9006 AAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGG 9065
|| ||||||||| | || || ||||| || || || || |||||||| || | ||
Sbjct 612 TTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGG 553
Query 9066 CGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGG 9125
| || |||||||||||||| ||||| ||||| |||||||| || | | || |
Sbjct 552 TATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAG 493
Query 9126 ACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGA 9185
|||||||| || | || || ||||| || | ||||||| || || ||||||||
Sbjct 492 TCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGA 433
Query 9186 AGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAG 9240
||| ||||| ||| | || || ||||||||||| || ||||| || |||| ||||
Sbjct 432 AGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 378
Score = 587 bits (650), Expect = 8e-163
Identities = 729/998 (73%), Gaps = 0/998 (0%)
Strand=Plus/Plus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | | || ||||| |||||||| |||||||||||
Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934
||| | || ||||| ||| ||| | || | || || ||| | || || || || |||
Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837
Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994
|| || ||||| ||||| ||| | || ||| || | || ||| ||||| |
Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897
Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054
|| || || || || || |||||| || | | | |||||| | | |||| ||||||
Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32957
Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114
||||| | || |||||||| || ||| || | || || || |||||||||||
Sbjct 32958 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 33017
Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174
|| |||||||| || ||||| ||||| || ||||||||||| || ||||| || || ||
Sbjct 33018 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 33077
Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234
| || | | |||||||| ||||| ||||| || ||||| || ||||||||||||||
Sbjct 33078 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 33137
Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294
||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| ||
Sbjct 33138 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 33197
Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354
|| ||||| || || || ||| | ||||| |||| || |||||||||||||| | ||
Sbjct 33198 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 33257
Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414
|| || |||||||||||||| || ||| ||||||| | ||| || |||| || || ||
Sbjct 33258 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 33317
Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474
|| | ||||||||||| || | | | ||||||| || ||||| || ||| |||
Sbjct 33318 GGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 33377
Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534
||| | ||||||| ||||| || ||||| ||||| || |||||||| || |||||
Sbjct 33378 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 33437
Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594
|| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||||
Sbjct 33438 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 33497
Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654
|| || | ||| | |||| | || ||||| | | ||||| ||| | || || |||
Sbjct 33498 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 33557
Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714
|| || || || || || || || ||| | || | |||||||| ||||||||||| |||
Sbjct 33558 GCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 33617
Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774
||||| || ||||| ||| | ||||||||| ||||||| |||||||| | || ||
Sbjct 33618 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 33677
Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
|| || |||| | || | ||||| || || ||||| ||
Sbjct 33678 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 33715
>seq2
Length=19320864
Score = 587 bits (650), Expect = 8e-163
Identities = 729/998 (73%), Gaps = 0/998 (0%)
Strand=Plus/Minus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | | || ||||| |||||||| |||||||||||
Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934
||| | || ||||| ||| ||| | || | || || ||| | || || || || |||
Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565
Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994
|| || ||||| ||||| ||| | || ||| || | || ||| ||||| |
Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505
Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054
|| || || || || || |||||| || | | | |||||| | | |||| ||||||
Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 8803445
Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114
||||| | || |||||||| || ||| || | || || || |||||||||||
Sbjct 8803444 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 8803385
Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174
|| |||||||| || ||||| ||||| || ||||||||||| || ||||| || || ||
Sbjct 8803384 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 8803325
Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234
| || | | |||||||| ||||| ||||| || ||||| || ||||||||||||||
Sbjct 8803324 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 8803265
Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294
||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| ||
Sbjct 8803264 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 8803205
Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354
|| ||||| || || || ||| | ||||| |||| || |||||||||||||| | ||
Sbjct 8803204 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 8803145
Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414
|| || |||||||||||||| || ||| ||||||| | ||| || |||| || || ||
Sbjct 8803144 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 8803085
Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474
|| | ||||||||||| || | | | ||||||| || ||||| || ||| |||
Sbjct 8803084 GGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 8803025
Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534
||| | ||||||| ||||| || ||||| ||||| || |||||||| || |||||
Sbjct 8803024 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 8802965
Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594
|| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||||
Sbjct 8802964 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 8802905
Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654
|| || | ||| | |||| | || ||||| | | ||||| ||| | || || |||
Sbjct 8802904 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 8802845
Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714
|| || || || || || || || ||| | || | |||||||| ||||||||||| |||
Sbjct 8802844 GCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 8802785
Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774
||||| || ||||| ||| | ||||||||| ||||||| |||||||| | || ||
Sbjct 8802784 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 8802725
Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
|| || |||| | || | ||||| || || ||||| ||
Sbjct 8802724 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 8802687
Score = 583 bits (646), Expect = 1e-161
Identities = 728/998 (73%), Gaps = 0/998 (0%)
Strand=Plus/Plus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | | || ||||| |||||||| |||||||||||
Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934
||| | || ||||| ||| ||| | || | || || ||| | || || || || |||
Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914
Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994
|| || ||||| ||||| ||| | || ||| || | || ||| ||||| |
Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974
Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054
|| || || || || || |||||| || | | | |||||| | | |||| ||||||
Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 9135034
Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114
||||| | || |||||||| || ||| || | || || || |||||||||||
Sbjct 9135035 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 9135094
Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174
|| |||||||| || ||||| ||||| || ||||||||||| || ||||| || || ||
Sbjct 9135095 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 9135154
Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234
| || | | |||||||| ||||| ||||| || ||||| || ||||||||||||||
Sbjct 9135155 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 9135214
Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294
||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| ||
Sbjct 9135215 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 9135274
Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354
|| ||||| || || || ||| | ||||| |||| || |||||||||||||| | ||
Sbjct 9135275 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 9135334
Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414
|| || |||||||||||||| || ||| ||||||| | ||| || |||| || || ||
Sbjct 9135335 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 9135394
Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474
|| | ||||||||||| || | | | ||||||| || ||||| || ||| |||
Sbjct 9135395 GGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 9135454
Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534
||| | ||||||| ||||| || ||||| ||||| || |||||| | || |||||
Sbjct 9135455 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCA 9135514
Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594
|| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||||
Sbjct 9135515 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 9135574
Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654
|| || | ||| | |||| | || ||||| | | ||||| ||| | || || |||
Sbjct 9135575 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 9135634
Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714
|| || || || || || || || ||| | || | |||||||| ||||||||||| |||
Sbjct 9135635 GCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 9135694
Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774
||||| || ||||| ||| | ||||||||| ||||||| |||||||| | || ||
Sbjct 9135695 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 9135754
Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
|| || |||| | || | ||||| || || ||||| ||
Sbjct 9135755 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 9135792
Score = 538 bits (596), Expect = 4e-148
Identities = 715/998 (72%), Gaps = 20/998 (2%)
Strand=Plus/Plus
Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874
||||| || | ||||||||| | | || ||||| |||||||| |||||||||||
Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282
Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934
||| | || ||||| ||| ||| | || | || || ||| | || || || || |||
Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342
Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994
|| || ||||| ||||| ||| | || ||| || | || ||| ||||| |
Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402
Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054
|| || || || || || |||||| || ||||| ||||||
Sbjct 12218403 ACCGCTGCAGTTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGT 12218442
Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114
||||| | || |||||||| || ||| || | || || || |||||||||||
Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502
Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174
|| |||||||| || ||||| ||||| || ||||||||||| || ||||| || || ||
Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562
Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234
| || | | ||||| || ||||| ||||| || ||||| || ||||||||||||||
Sbjct 12218563 TCTGTTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 12218622
Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294
||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| ||
Sbjct 12218623 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 12218682
Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354
|| ||||| || || || ||| | ||||| |||| || |||||||||||||| | ||
Sbjct 12218683 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 12218742
Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414
|| || |||||||||||||| || ||| |||| || | ||| || |||| || || ||
Sbjct 12218743 CCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCAT 12218802
Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474
| | ||||||||||| || | | | ||||||| || ||||| || ||| |||
Sbjct 12218803 GTTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 12218862
Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534
||| | ||||||| ||||| || ||||| ||||| || |||||||| || |||||
Sbjct 12218863 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 12218922
Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594
|| || ||||| |||||||| ||||||||| ||| | |||||||||||| | ||||||
Sbjct 12218923 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 12218982
Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654
|| || | ||| | |||| | || ||||| | | ||||| ||| | || || |||
Sbjct 12218983 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 12219042
Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714
|| || || ||||| || | || ||| | || | |||||||| ||||||||||| |||
Sbjct 12219043 GCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 12219102
Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774
||||| || ||||| ||| | ||||||||| ||||||| |||||| | | || ||
Sbjct 12219103 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAG 12219162
Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
|| || |||| | || | ||||| || || ||||| ||
Sbjct 12219163 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 12219200
Score = 116 bits (128), Expect = 4e-21
Identities = 151/205 (74%), Gaps = 8/205 (4%)
Strand=Plus/Plus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGC---TTCAT 8345
|| |||||||| ||| | |||||||| ||| || ||| |||| || || | || |
Sbjct 8835071 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAAC---TTCCGTTTTTGT 8835126
Query 8346 TACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGG 8405
|| ||||||| ||||||||||||| || || || || || || || ||||| ||| ||||
Sbjct 8835127 TATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGG 8835186
Query 8406 ATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAAT 8465
|||||| | ||||| ||||| || || || ||||| || |||| | ||| || ||
Sbjct 8835187 ATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTAT 8835246
Query 8466 TGGCCTCCACTTCTACCCCATCTGG 8490
||| | || || ||||| ||||||
Sbjct 8835247 TGGTTTGCATTTTTACCCGATCTGG 8835271
>seq74
Length=21493
Score = 199 bits (220), Expect = 4e-46
Identities = 245/336 (73%), Gaps = 9/336 (3%)
Strand=Plus/Minus
Query 8905 GGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTT 8964
|| |||| |||||||||||||| |||||||||||||||| || |||||||| || |||
Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944
Query 8965 GGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTC 9024
|| || |||||||||| ||| ||||||||| | || ||||||||| |
Sbjct 10943 GGCCGATTGATCTTCCG---------TTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893
Query 9025 GCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTC 9084
|| || ||||| || || || || |||||||| || | || | || |||||||||
Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833
Query 9085 AACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTGCTCAAC 9144
||||| ||||| ||||| |||||||| || | | || | ||||| || || | ||
Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773
Query 9145 ACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAAAGAAAC 9204
|| ||||| || | ||||||| | | ||||||||||| ||||| ||| | ||
Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713
Query 9205 GCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAG 9240
|| ||||||||||| || ||||| || |||| ||||
Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516475506624000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |