Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2 _202016-11-26] 696 sequences; 206,822,858 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq696 670 0.0 seq2 587 8e-163 seq74 199 4e-46 >seq696 Length=154923 Score = 670 bits (742), Expect = 0.0 Identities = 724/955 (76%), Gaps = 8/955 (1%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGC---TTCAT 8345 || |||||||| ||| | |||||||| ||| || ||| |||| || || | || || Sbjct 1328 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAAC---TTCCGTTTTTAT 1273 Query 8346 TACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGG 8405 || ||||||| ||||||||||||| || || || || || || || ||||| ||| |||| Sbjct 1272 TATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGG 1213 Query 8406 ATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAAT 8465 |||||| | ||||| ||||| || || || ||||| || |||| | ||| || || Sbjct 1212 ATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTAT 1153 Query 8466 TGGCCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGG 8525 ||| | || || ||||| ||||||||||| || || ||||||| ||||| |||||||| Sbjct 1152 TGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGG 1093 Query 8526 TGGTCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCG 8585 ||||||||| | || | ||| | ||||| | ||||| || | |||||||||||| Sbjct 1092 TGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCG 1033 Query 8586 TGAATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGC 8645 ||| ||||||||| || ||| || || |||||||||||||| |||||||| || || Sbjct 1032 TGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGC 973 Query 8646 TCCTGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTC 8705 ||||||||| ||||| ||||||| ||| | ||||||| ||||||| || || || Sbjct 972 TCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTC 913 Query 8706 TGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGA 8765 ||||||||||||||| || ||||| ||||| ||||||| |||| |||| ||||||||||| Sbjct 912 TGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGA 853 Query 8766 GCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATC 8825 ||||||||| || |||||||| || |||||| | ||||| |||||||| |||||||| || Sbjct 852 GCACAACATTCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTC 793 Query 8826 TCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGA 8885 || ||| || ||||||||||| | || |||||| || | | || ||||| || Sbjct 792 CCTTTTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGA 733 Query 8886 AACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGT 8945 || || ||| || | || |||| ||||| |||||||| ||||||||||||||||| Sbjct 732 AAATGAATCTGCTAATGAAGGTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGT 673 Query 8946 TGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAG 9005 || ||||| || || ||||| || ||||||||||||||||| ||| ||||||||| | Sbjct 672 AGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCG 613 Query 9006 AAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGG 9065 || ||||||||| | || || ||||| || || || || |||||||| || | || Sbjct 612 TTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGG 553 Query 9066 CGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGG 9125 | || |||||||||||||| ||||| ||||| |||||||| || | | || | Sbjct 552 TATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAG 493 Query 9126 ACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGA 9185 |||||||| || | || || ||||| || | ||||||| || || |||||||| Sbjct 492 TCAAGGACGTGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGA 433 Query 9186 AGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAG 9240 ||| ||||| ||| | || || ||||||||||| || ||||| || |||| |||| Sbjct 432 AGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 378 Score = 587 bits (650), Expect = 8e-163 Identities = 729/998 (73%), Gaps = 0/998 (0%) Strand=Plus/Plus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || ||||| |||||||| ||||||||||| Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || ||||| ||||| ||| | || ||| || | || ||| ||||| | Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || || || || || || |||||| || | | | |||||| | | |||| |||||| Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32957 Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114 ||||| | || |||||||| || ||| || | || || || ||||||||||| Sbjct 32958 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 33017 Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174 || |||||||| || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 33018 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 33077 Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234 | || | | |||||||| ||||| ||||| || ||||| || |||||||||||||| Sbjct 33078 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 33137 Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294 ||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| || Sbjct 33138 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 33197 Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354 || ||||| || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 33198 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 33257 Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414 || || |||||||||||||| || ||| ||||||| | ||| || |||| || || || Sbjct 33258 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 33317 Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474 || | ||||||||||| || | | | ||||||| || ||||| || ||| ||| Sbjct 33318 GGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 33377 Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534 ||| | ||||||| ||||| || ||||| ||||| || |||||||| || ||||| Sbjct 33378 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 33437 Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594 || || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||| Sbjct 33438 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 33497 Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654 || || | ||| | |||| | || ||||| | | ||||| ||| | || || ||| Sbjct 33498 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 33557 Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714 || || || || || || || || ||| | || | |||||||| ||||||||||| ||| Sbjct 33558 GCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 33617 Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774 ||||| || ||||| ||| | ||||||||| ||||||| |||||||| | || || Sbjct 33618 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 33677 Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 33678 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 33715 >seq2 Length=19320864 Score = 587 bits (650), Expect = 8e-163 Identities = 729/998 (73%), Gaps = 0/998 (0%) Strand=Plus/Minus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || ||||| |||||||| ||||||||||| Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || ||||| ||||| ||| | || ||| || | || ||| ||||| | Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || || || || || || |||||| || | | | |||||| | | |||| |||||| Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 8803445 Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114 ||||| | || |||||||| || ||| || | || || || ||||||||||| Sbjct 8803444 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 8803385 Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174 || |||||||| || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 8803384 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 8803325 Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234 | || | | |||||||| ||||| ||||| || ||||| || |||||||||||||| Sbjct 8803324 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 8803265 Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294 ||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| || Sbjct 8803264 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 8803205 Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354 || ||||| || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 8803204 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 8803145 Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414 || || |||||||||||||| || ||| ||||||| | ||| || |||| || || || Sbjct 8803144 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 8803085 Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474 || | ||||||||||| || | | | ||||||| || ||||| || ||| ||| Sbjct 8803084 GGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 8803025 Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534 ||| | ||||||| ||||| || ||||| ||||| || |||||||| || ||||| Sbjct 8803024 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 8802965 Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594 || || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||| Sbjct 8802964 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 8802905 Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654 || || | ||| | |||| | || ||||| | | ||||| ||| | || || ||| Sbjct 8802904 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 8802845 Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714 || || || || || || || || ||| | || | |||||||| ||||||||||| ||| Sbjct 8802844 GCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 8802785 Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774 ||||| || ||||| ||| | ||||||||| ||||||| |||||||| | || || Sbjct 8802784 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 8802725 Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 8802724 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 8802687 Score = 583 bits (646), Expect = 1e-161 Identities = 728/998 (73%), Gaps = 0/998 (0%) Strand=Plus/Plus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || ||||| |||||||| ||||||||||| Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || ||||| ||||| ||| | || ||| || | || ||| ||||| | Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || || || || || || |||||| || | | | |||||| | | |||| |||||| Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 9135034 Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114 ||||| | || |||||||| || ||| || | || || || ||||||||||| Sbjct 9135035 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 9135094 Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174 || |||||||| || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 9135095 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 9135154 Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234 | || | | |||||||| ||||| ||||| || ||||| || |||||||||||||| Sbjct 9135155 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 9135214 Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294 ||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| || Sbjct 9135215 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 9135274 Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354 || ||||| || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 9135275 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 9135334 Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414 || || |||||||||||||| || ||| ||||||| | ||| || |||| || || || Sbjct 9135335 CCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCAT 9135394 Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474 || | ||||||||||| || | | | ||||||| || ||||| || ||| ||| Sbjct 9135395 GGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 9135454 Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534 ||| | ||||||| ||||| || ||||| ||||| || |||||| | || ||||| Sbjct 9135455 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTCA 9135514 Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594 || || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||| Sbjct 9135515 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 9135574 Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654 || || | ||| | |||| | || ||||| | | ||||| ||| | || || ||| Sbjct 9135575 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 9135634 Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714 || || || || || || || || ||| | || | |||||||| ||||||||||| ||| Sbjct 9135635 GCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 9135694 Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774 ||||| || ||||| ||| | ||||||||| ||||||| |||||||| | || || Sbjct 9135695 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAG 9135754 Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 9135755 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 9135792 Score = 538 bits (596), Expect = 4e-148 Identities = 715/998 (72%), Gaps = 20/998 (2%) Strand=Plus/Plus Query 9815 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTCTGGA 9874 ||||| || | ||||||||| | | || ||||| |||||||| ||||||||||| Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282 Query 9875 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTACGTTT 9934 ||| | || ||||| ||| ||| | || | || || ||| | || || || || ||| Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342 Query 9935 GTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATTTCCTT 9994 || || ||||| ||||| ||| | || ||| || | || ||| ||||| | Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402 Query 9995 ACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 10054 || || || || || || |||||| || ||||| |||||| Sbjct 12218403 ACCGCTGCAGTTTCTACTCCTGCTA--------------------CTCCTACTGTGGGGT 12218442 Query 10055 CCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTTTTGTG 10114 ||||| | || |||||||| || ||| || | || || || ||||||||||| Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502 Query 10115 GCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGGCGAGA 10174 || |||||||| || ||||| ||||| || ||||||||||| || ||||| || || || Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562 Query 10175 TTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTC 10234 | || | | ||||| || ||||| ||||| || ||||| || |||||||||||||| Sbjct 12218563 TCTGTTCAATTGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGTT 12218622 Query 10235 AGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGC 10294 ||| ||||| || |||||||| || || ||| |||||||||||||||| ||||| || Sbjct 12218623 TCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGGT 12218682 Query 10295 GTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 10354 || ||||| || || || ||| | ||||| |||| || |||||||||||||| | || Sbjct 12218683 GTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAAC 12218742 Query 10355 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCAC 10414 || || |||||||||||||| || ||| |||| || | ||| || |||| || || || Sbjct 12218743 CCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCAT 12218802 Query 10415 GGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCT 10474 | | ||||||||||| || | | | ||||||| || ||||| || ||| ||| Sbjct 12218803 GTTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCT 12218862 Query 10475 TTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCC 10534 ||| | ||||||| ||||| || ||||| ||||| || |||||||| || ||||| Sbjct 12218863 TTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCA 12218922 Query 10535 CAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTA 10594 || || ||||| |||||||| ||||||||| ||| | |||||||||||| | |||||| Sbjct 12218923 CAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTA 12218982 Query 10595 CCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGT 10654 || || | ||| | |||| | || ||||| | | ||||| ||| | || || ||| Sbjct 12218983 CCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACGT 12219042 Query 10655 GCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTC 10714 || || || ||||| || | || ||| | || | |||||||| ||||||||||| ||| Sbjct 12219043 GCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTTC 12219102 Query 10715 TATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAA 10774 ||||| || ||||| ||| | ||||||||| ||||||| |||||| | | || || Sbjct 12219103 TATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCAG 12219162 Query 10775 CCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 || || |||| | || | ||||| || || ||||| || Sbjct 12219163 CCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 12219200 Score = 116 bits (128), Expect = 4e-21 Identities = 151/205 (74%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGC---TTCAT 8345 || |||||||| ||| | |||||||| ||| || ||| |||| || || | || | Sbjct 8835071 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAAC---TTCCGTTTTTGT 8835126 Query 8346 TACCGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGG 8405 || ||||||| ||||||||||||| || || || || || || || ||||| ||| |||| Sbjct 8835127 TATCGCATTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGG 8835186 Query 8406 ATCTCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAAT 8465 |||||| | ||||| ||||| || || || ||||| || |||| | ||| || || Sbjct 8835187 ATCTCTTCTTTACGGAAACAATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTAT 8835246 Query 8466 TGGCCTCCACTTCTACCCCATCTGG 8490 ||| | || || ||||| |||||| Sbjct 8835247 TGGTTTGCATTTTTACCCGATCTGG 8835271 >seq74 Length=21493 Score = 199 bits (220), Expect = 4e-46 Identities = 245/336 (73%), Gaps = 9/336 (3%) Strand=Plus/Minus Query 8905 GGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTACTTT 8964 || |||| |||||||||||||| |||||||||||||||| || |||||||| || ||| Sbjct 11003 GGTTACAGATTCGGTCAAGAAGAATAAACTTACAACATTGTAGCTGCTCATGGTTATTTT 10944 Query 8965 GGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTCTTCCTC 9024 || || |||||||||| ||| ||||||||| | || ||||||||| | Sbjct 10943 GGCCGATTGATCTTCCG---------TTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 10893 Query 9025 GCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATGGCTTTC 9084 || || ||||| || || || || |||||||| || | || | || ||||||||| Sbjct 10892 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGCACTATGGCTTTC 10833 Query 9085 AACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTGCTCAAC 9144 ||||| ||||| ||||| |||||||| || | | || | ||||| || || | || Sbjct 10832 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGGCGTGTTATTAAT 10773 Query 9145 ACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAAAGAAAC 9204 || ||||| || | ||||||| | | ||||||||||| ||||| ||| | || Sbjct 10772 ACTTGGGCTGATATTATTAACCGTACTAACTTTGGTATGGAAGTTATGCATGAACGTAAT 10713 Query 9205 GCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAG 9240 || ||||||||||| || ||||| || |||| |||| Sbjct 10712 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 10677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516475506624000