Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabidopsis_20lyrata_20subsp._20lyrata_20[refseq_20GCF_5F000004255.2
_202016-11-26] 696 sequences; 206,822,858 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq696 697 0.0
seq2 536 1e-147
seq74 241 1e-58
>seq696
Length=154923
Score = 697 bits (772), Expect = 0.0
Identities = 753/996 (76%), Gaps = 6/996 (1%)
Strand=Plus/Minus
Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935
|| ||||||||| | |||||||| || ||||| ||||| |||| ||||| || || ||
Sbjct 1370 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1311
Query 160936 ATGATTCC---CTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTTGGTGCT 160992
||||| || || ||| ||| || || ||| | | ||| || ||| ||| ||||
Sbjct 1310 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATC---GCATTCATTGCTGCT 1254
Query 160993 CCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAAC 161052
|| || || || || || || ||||||||||| || |||| || || | || ||||||
Sbjct 1253 CCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAAC 1194
Query 161053 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 161112
|| || || || ||||| |||| ||| ||||| ||||| ||| |||| || |||||
Sbjct 1193 AATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCG 1134
Query 161113 ATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTT 161172
||||||||||| ||| | || |||||||| |||||||||||||||| |||| ||
Sbjct 1133 ATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATT 1074
Query 161173 GTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTAC 161232
|| | ||||| | |||| | | ||| ||||||||||||||||||||| || |
Sbjct 1073 GTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTC 1014
Query 161233 CGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGT 161292
|||||||| ||||||||||||||| || ||||| || |||||||| || || |||| |
Sbjct 1013 CGTCTGGGTATGCGTCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCGACT 954
Query 161293 GCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGC 161352
|| || ||| || ||||||| | ||||| || ||| ||||||| |||||||| ||
Sbjct 953 GCTGTTTTCTTGATCTATCCAATTGGTCAGGGAAGTTTTTCTGATGGTATGCCTCTAGGA 894
Query 161353 ATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCAC 161412
||||||||||| ||||||| ||| |||| ||||| || |||||||||||||| ||||||
Sbjct 893 ATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTTATGCAC 834
Query 161413 CCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCAC 161472
|| || || ||| | || ||||| ||||| || ||||| || || || ||||| |||||
Sbjct 833 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTTTTTAGTGCTATGCAT 774
Query 161473 GGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTAT 161532
||||| |||| || ||| || | | |||||||| ||||| || || || |
Sbjct 773 GGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 714
Query 161533 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTC 161592
||||||| ||||| ||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct 713 GGTTACAGATTCGGGCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTT 654
Query 161593 GGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTT 161652
|| || |||| |||||||| ||| |||||||| || || || | || |||||| |
Sbjct 653 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTA 594
Query 161653 GCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTC 161712
|| |||||||| || || || || ||||| ||||| | || | || || ||||| |||
Sbjct 593 GCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTC 534
Query 161713 AACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAAC 161772
||||| ||||||||||| |||||||| || | ||||||||||| || ||||| ||
Sbjct 533 AACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGTGTTATTAAT 474
Query 161773 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAAT 161832
|| ||||| || || | ||||||||| ||||| |||||||| ||||| || || |||
Sbjct 473 ACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 414
Query 161833 GCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 161868
||||||||||||||||| ||||| ||||||| ||||
Sbjct 413 GCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 378
Score = 536 bits (594), Expect = 1e-147
Identities = 729/1014 (72%), Gaps = 2/1014 (0%)
Strand=Plus/Plus
Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176
|||||| | | || |||||| | || ||||| ||||||||||| || ||||||||
Sbjct 32718 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 32777
Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236
|| | || ||||| ||| ||| | ||| | ||||||||| | || || || || ||
Sbjct 32778 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 32837
Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296
|| || ||||||||||| ||| | || ||||||||| | || ||| || ||| |
Sbjct 32838 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 32897
Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356
|| || |||||||||||||| || | | | | |||||| | || | || ||||||
Sbjct 32898 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 32957
Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416
||||| | ||||| || || | || ||||| ||| | || || || ||| |||||||
Sbjct 32958 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 33017
Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476
|| |||||||| || || ||| | |||||||| ||| | || || |||||||| || |||
Sbjct 33018 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 33077
Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535
|| || | | || ||||| ||||| || || ||||| ||||| |||||||| || ||
Sbjct 33078 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 33136
Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595
| ||| || || || ||||| | || ||||| |||||||| || || || ||
Sbjct 33137 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 33196
Query 162596 GGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAA 162655
|| || || || || |||||| | ||||| |||||||||| ||||| ||||| | ||
Sbjct 33197 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 33256
Query 162656 TCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCA 162715
|| ||||| |||||||| || || ||| | || || | || |||| | ||||||||
Sbjct 33257 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 33316
Query 162716 TGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGC 162775
||| | || || |||||||| | | |||||||| || ||||| || || ||
Sbjct 33317 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 33376
Query 162776 ATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTC 162835
||| || | || || | |||||||| ||||| ||||| || || |||||||| |||||
Sbjct 33377 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 33436
Query 162836 ACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGT 162895
||| || || || |||||||| || || |||||||| |||||||||||| | |||||
Sbjct 33437 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 33496
Query 162896 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCG 162955
|| || | ||| | |||| ||| || | || | | || || ||| | || || ||
Sbjct 33497 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 33556
Query 162956 TGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTT 163015
||| || ||||| || || || ||| | ||||| || ||||| || || |||||||| ||
Sbjct 33557 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 33616
Query 163016 CTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCA 163075
|||||| || || |||||| | || ||||| |||| || ||| | || | || ||
Sbjct 33617 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 33676
Query 163076 ACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129
|||||||| ||| || | |||||||| ||||| | ||| | || ||||||||
Sbjct 33677 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 33730
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750
||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||| |||
Sbjct 66856 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAAT 66797
Query 157751 CCTGTCACCCCGACTTAT 157768
||||||| ||| || |||
Sbjct 66796 CCTGTCATCCCTACCTAT 66779
>seq2
Length=19320864
Score = 536 bits (594), Expect = 1e-147
Identities = 729/1014 (72%), Gaps = 2/1014 (0%)
Strand=Plus/Minus
Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176
|||||| | | || |||||| | || ||||| ||||||||||| || ||||||||
Sbjct 8803684 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 8803625
Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236
|| | || ||||| ||| ||| | ||| | ||||||||| | || || || || ||
Sbjct 8803624 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 8803565
Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296
|| || ||||||||||| ||| | || ||||||||| | || ||| || ||| |
Sbjct 8803564 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 8803505
Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356
|| || |||||||||||||| || | | | | |||||| | || | || ||||||
Sbjct 8803504 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 8803445
Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416
||||| | ||||| || || | || ||||| ||| | || || || ||| |||||||
Sbjct 8803444 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 8803385
Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476
|| |||||||| || || ||| | |||||||| ||| | || || |||||||| || |||
Sbjct 8803384 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 8803325
Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535
|| || | | || ||||| ||||| || || ||||| ||||| |||||||| || ||
Sbjct 8803324 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 8803266
Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595
| ||| || || || ||||| | || ||||| |||||||| || || || ||
Sbjct 8803265 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 8803206
Query 162596 GGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAA 162655
|| || || || || |||||| | ||||| |||||||||| ||||| ||||| | ||
Sbjct 8803205 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 8803146
Query 162656 TCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCA 162715
|| ||||| |||||||| || || ||| | || || | || |||| | ||||||||
Sbjct 8803145 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 8803086
Query 162716 TGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGC 162775
||| | || || |||||||| | | |||||||| || ||||| || || ||
Sbjct 8803085 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 8803026
Query 162776 ATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTC 162835
||| || | || || | |||||||| ||||| ||||| || || |||||||| |||||
Sbjct 8803025 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 8802966
Query 162836 ACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGT 162895
||| || || || |||||||| || || |||||||| |||||||||||| | |||||
Sbjct 8802965 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8802906
Query 162896 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCG 162955
|| || | ||| | |||| ||| || | || | | || || ||| | || || ||
Sbjct 8802905 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 8802846
Query 162956 TGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTT 163015
||| || ||||| || || || ||| | ||||| || ||||| || || |||||||| ||
Sbjct 8802845 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 8802786
Query 163016 CTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCA 163075
|||||| || || |||||| | || ||||| |||| || ||| | || | || ||
Sbjct 8802785 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8802726
Query 163076 ACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129
|||||||| ||| || | |||||||| ||||| | ||| | || ||||||||
Sbjct 8802725 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 8802672
Score = 533 bits (590), Expect = 2e-146
Identities = 728/1014 (72%), Gaps = 2/1014 (0%)
Strand=Plus/Plus
Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176
|||||| | | || |||||| | || ||||| ||||||||||| || ||||||||
Sbjct 9134795 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 9134854
Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236
|| | || ||||| ||| ||| | ||| | ||||||||| | || || || || ||
Sbjct 9134855 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 9134914
Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296
|| || ||||||||||| ||| | || ||||||||| | || ||| || ||| |
Sbjct 9134915 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 9134974
Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356
|| || |||||||||||||| || | | | | |||||| | || | || ||||||
Sbjct 9134975 ACCGCTGCAGTTTCTACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTGTGGGGT 9135034
Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416
||||| | ||||| || || | || ||||| ||| | || || || ||| |||||||
Sbjct 9135035 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 9135094
Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476
|| |||||||| || || ||| | |||||||| ||| | || || |||||||| || |||
Sbjct 9135095 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 9135154
Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535
|| || | | || ||||| ||||| || || ||||| ||||| |||||||| || ||
Sbjct 9135155 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 9135213
Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595
| ||| || || || ||||| | || ||||| |||||||| || || || ||
Sbjct 9135214 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 9135273
Query 162596 GGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAA 162655
|| || || || || |||||| | ||||| |||||||||| ||||| ||||| | ||
Sbjct 9135274 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 9135333
Query 162656 TCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCA 162715
|| ||||| |||||||| || || ||| | || || | || |||| | ||||||||
Sbjct 9135334 CCCATTTCATATGATGGGAGTCGCCGGTGTACTGGGCGCGGCTCTGCTATGCGCTATTCA 9135393
Query 162716 TGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGC 162775
||| | || || |||||||| | | |||||||| || ||||| || || ||
Sbjct 9135394 TGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 9135453
Query 162776 ATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTC 162835
||| || | || || | |||||||| ||||| ||||| || || ||| |||| |||||
Sbjct 9135454 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACAGCTTTTGGTC 9135513
Query 162836 ACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGT 162895
||| || || || |||||||| || || |||||||| |||||||||||| | |||||
Sbjct 9135514 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 9135573
Query 162896 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCG 162955
|| || | ||| | |||| ||| || | || | | || || ||| | || || ||
Sbjct 9135574 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 9135633
Query 162956 TGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTT 163015
||| || ||||| || || || ||| | ||||| || ||||| || || |||||||| ||
Sbjct 9135634 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCAGAATTTGAGACTTT 9135693
Query 163016 CTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCA 163075
|||||| || || |||||| | || ||||| |||| || ||| | || | || ||
Sbjct 9135694 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 9135753
Query 163076 ACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129
|||||||| ||| || | |||||||| ||||| | ||| | || ||||||||
Sbjct 9135754 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 9135807
Score = 497 bits (550), Expect = 1e-135
Identities = 717/1014 (71%), Gaps = 22/1014 (2%)
Strand=Plus/Plus
Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176
|||||| | | || |||||| | || ||||| ||||||||||| || ||||||||
Sbjct 12218223 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGT 12218282
Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236
|| | || ||||| ||| ||| | ||| | ||||||||| | || || || || ||
Sbjct 12218283 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 12218342
Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAACTTTCTT 162296
|| || ||||||||||| ||| | || ||||||||| | || ||| || ||| |
Sbjct 12218343 GTAACTTCATGGTATACTCATGGATTGGCCAGTTCCTATTTAGAAGGTTGCAATTTTTTA 12218402
Query 162297 ACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGT 162356
|| || |||||||||||||| || | || || || ||||||
Sbjct 12218403 ACCGCTGCAGTTTCTACTCCTGC--------------------TACTCCTACTGTGGGGT 12218442
Query 162357 CCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTG 162416
||||| | ||||| || || | || ||||| ||| | || || || ||| |||||||
Sbjct 12218443 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGGCTTTTGTT 12218502
Query 162417 GCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA 162476
|| |||||||| || || ||| | |||||||| ||| | || || |||||||| || |||
Sbjct 12218503 GCTCTCCACGGCGCTTTCGCATTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 12218562
Query 162477 -CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGT 162535
|| || | | || || || ||||| || || ||||| ||||| |||||||| || ||
Sbjct 12218563 TCTGTTCAAT-TGCGACCATATAATGCAATCGCATTCTCTGGTCCCATTGCTGTTTTTGT 12218621
Query 162536 TAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGG 162595
| ||| || || || ||||| | || ||||| |||||||| || || || ||
Sbjct 12218622 TTCTGTCTTCCTAATTTATCCACTAGGTCAATCTGGTTGGTTCTTTGCGCCTAGTTTTGG 12218681
Query 162596 GGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAA 162655
|| || || || || |||||| | ||||| |||||||||| ||||| ||||| | ||
Sbjct 12218682 TGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 12218741
Query 162656 TCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCA 162715
|| ||||| |||||||| || || ||| | ||||| | || |||| | ||||||||
Sbjct 12218742 CCCATTTCATATGATGGGAGTCGCCGGTGTACTTGGCGCGGCTCTGCTATGCGCTATTCA 12218801
Query 162716 TGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGC 162775
|| | || || |||||||| | | |||||||| || ||||| || || ||
Sbjct 12218802 TGTTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 12218861
Query 162776 ATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTC 162835
||| || | || || | |||||||| ||||| ||||| || || |||||||| |||||
Sbjct 12218862 TTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 12218921
Query 162836 ACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGT 162895
||| || || || |||||||| || || |||||||| |||||||||||| | |||||
Sbjct 12218922 ACAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 12218981
Query 162896 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCG 162955
|| || | ||| | |||| ||| || | || | | || || ||| | || || ||
Sbjct 12218982 ACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCTTTGAACCTACG 12219041
Query 162956 TGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTT 163015
||| || |||||||| || | ||| | |||| || ||||| || || |||||||| ||
Sbjct 12219042 TGCCTATGACTTTGTTTCCTAGGAAATCTGTGCAGCGGAAGATCCAGAATTTGAGACTTT 12219101
Query 163016 CTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCA 163075
|||||| || || |||||| | || ||||| |||| || ||| | | | || ||
Sbjct 12219102 CTATACTAAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGACGGCTCAAGATCA 12219161
Query 163076 ACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129
|||||||| ||| || | |||||||| ||||| | ||| | || ||||||||
Sbjct 12219162 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 12219215
Score = 143 bits (158), Expect = 3e-29
Identities = 180/246 (73%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935
|| ||||||||| | |||||||| || ||||| ||||| |||| ||||| || || ||
Sbjct 8835029 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 8835088
Query 160936 ATGATTCC---CTGCTTGCTCGCTGCTACCATTTGTTTCATCATTGCCTTCGTTGGTGCT 160992
||||| || || ||| ||| || || ||| | | ||| || ||| ||| ||||
Sbjct 8835089 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTGTTATC---GCATTCATTGCTGCT 8835145
Query 160993 CCCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAAC 161052
|| || || || || || || ||||||||||| || |||| || || | || ||||||
Sbjct 8835146 CCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAAC 8835205
Query 161053 AACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCC 161112
|| || || || ||||| |||| ||| ||||| ||||| ||| |||| || |||||
Sbjct 8835206 AATATTATTTCCGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCG 8835265
Query 161113 ATCTGG 161118
||||||
Sbjct 8835266 ATCTGG 8835271
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750
||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||| |||
Sbjct 8769563 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAAT 8769622
Query 157751 CCTGTCACCCCGACTTAT 157768
||||||| ||| || |||
Sbjct 8769623 CCTGTCATCCCTACCTAT 8769640
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750
||| |||||||||||||||||||||| ||| |||||| ||| | ||| | ||||| |||
Sbjct 9167902 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAAT 9167843
Query 157751 CCTGTCACCCCGACTTAT 157768
||||||| ||| || |||
Sbjct 9167842 CCTGTCATCCCTACCTAT 9167825
>seq74
Length=21493
Score = 241 bits (266), Expect = 1e-58
Identities = 272/366 (74%), Gaps = 9/366 (2%)
Strand=Plus/Minus
Query 161503 GAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 161562
||||||| ||||| || || || | ||||||| ||||||||||||||| | ||
Sbjct 11033 GAAACCATAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAATAAACT 10974
Query 161563 TACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGCTTCCTTC 161622
|||||||| || ||||| || || || || || || |||| |||| | ||
Sbjct 10973 TACAACATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCGTT---------TC 10923
Query 161623 AACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTC 161682
||||| || || || | || |||||| | || |||||||| || || || || |||||
Sbjct 10922 AACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTT 10863
Query 161683 ACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAACCAGTCT 161742
||||| | || | ||||| ||||| |||||||| ||||||||||| |||||||| ||
Sbjct 10862 ACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCA 10803
Query 161743 ATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACCGTGCTGGT 161802
| ||||||||||| || ||||| || || ||||| || || | |||||| ||
Sbjct 10802 GTAGTTGATAGTCAAGGGCGTGTTATTAATACTTGGGCTGATATTATTAACCGTACTAAC 10743
Query 161803 CTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACCTTGCTGCT 161862
|||| |||||||| ||||| || || |||||||||||||||||||| ||||| ||||||
Sbjct 10742 TTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 10683
Query 161863 GCTGAG 161868
| ||||
Sbjct 10682 GTTGAG 10677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547742434599360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |